prot_Ecto-sp13_S_contig10398.378.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10398.378.1
Unique Nameprot_Ecto-sp13_S_contig10398.378.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length231
Homology
BLAST of mRNA_Ecto-sp13_S_contig10398.378.1 vs. uniprot
Match: A0A6H5JMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA3_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 7.210e-135
Identity = 214/282 (75.89%), Postives = 222/282 (78.72%), Query Frame = 0
Query:    1 MTACVRGCRHPLWGGNGACSTLSGASTCLCDSGYASRYSMGSSSCVPRSVLVAAYATIAVTSLFTSIFLLWHANKFRQLSRLHQSTRSALMRFRVLLCG-----------------------------SFFAVGTACNFSLATAMGGSLSLPELYVLQTNYAVFIPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSIGLLVGISVIGSFSFSGAKWPFQAVDTIIVLGAVTT----------------------AGLTGVVAHQIVG 231
            MTACVRGCRHPLWGGNGAC+T+SG STCLCDSGYASR SMG SSCVPRSVLV AYATIAVTSL TSIFLLWHA+KFRQLSRLHQSTRSALMRFRVLLCG                             SFFA G ACNFSLATAMGGSLSLPELYVLQTNYAVF+PVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLAD+FKVFQALS+GLLVGISVIGSFSFSGA+WPFQAVDTIIVLGAVTT                       GLT VVAHQI+G
Sbjct:    1 MTACVRGCRHPLWGGNGACTTVSGTSTCLCDSGYASRDSMGRSSCVPRSVLVMAYATIAVTSLITSIFLLWHASKFRQLSRLHQSTRSALMRFRVLLCGREKPLKSTSIRPLPLLVHRSRLCCRRLYRSFFAAGMACNFSLATAMGGSLSLPELYVLQTNYAVFLPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADEFKVFQALSMGLLVGISVIGSFSFSGAQWPFQAVDTIIVLGAVTTRVSFAVRARFVCLLGGNFWNPKVGLTSVVAHQIIG 282          
BLAST of mRNA_Ecto-sp13_S_contig10398.378.1 vs. uniprot
Match: D8LSN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN7_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 1.550e-72
Identity = 114/125 (91.20%), Postives = 121/125 (96.80%), Query Frame = 0
Query:  107 ACNFSLATAMGGSLSLPELYVLQTNYAVFIPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSIGLLVGISVIGSFSFSGAKWPFQAVDTIIVLGAVTTAGLTGVVAHQIVG 231
            ACNFSLATAMGGS SLPELYVLQTNYAVF+PVLMFGIPI+VDFWVQSLPMHLLP+HSFLAKAKVLADKF VFQALS+GLLV ISV+GSFSFSGAKWPFQAVDTIIVLGAVTT GLTGV+AHQI+G
Sbjct:    2 ACNFSLATAMGGSRSLPELYVLQTNYAVFLPVLMFGIPIIVDFWVQSLPMHLLPNHSFLAKAKVLADKFNVFQALSMGLLVSISVVGSFSFSGAKWPFQAVDTIIVLGAVTTVGLTGVLAHQIIG 126          
BLAST of mRNA_Ecto-sp13_S_contig10398.378.1 vs. uniprot
Match: D8LSN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSN6_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 8.120e-60
Identity = 103/141 (73.05%), Postives = 114/141 (80.85%), Query Frame = 0
Query:   91 MRFRVLLCGSFFAVGTACNFSLATAMGGSLSLPELYVLQTNYAVFIPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSIGLLVGISVIGSFSFSGAKWPFQAVDTIIVLGAVTTAGLTGVVAHQIVG 231
            MRFRVLLCG            L  + G + SLPELYVLQT+Y+VF+PVLMFGIPIVVDFW QSLPMHLLPDHSFLAKAKVLA KFK  QALS+GLLVGIS+IGSFSF GA+WPF AVDTI V+GA +T GLT +VAHQIVG
Sbjct:    1 MRFRVLLCGR-----NGLQLLLGDSDGRNRSLPELYVLQTSYSVFLPVLMFGIPIVVDFWAQSLPMHLLPDHSFLAKAKVLAGKFKAVQALSMGLLVGISLIGSFSFGGAEWPFHAVDTIAVVGAASTVGLTDLVAHQIVG 136          
BLAST of mRNA_Ecto-sp13_S_contig10398.378.1 vs. uniprot
Match: A0A6H5JML4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML4_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.040e-44
Identity = 85/118 (72.03%), Postives = 92/118 (77.97%), Query Frame = 0
Query:  136 IPVLMFGIPIVVDFWVQSLPMHLLPDHSFLAKAKVLADKFKVFQALSIGLLVGISVIGSFSFSGAKWPFQAVDTIIVLGAVTT----------------------AGLTGVVAHQIVG 231
            +PVLMFGIPIVVDFWVQSLPMHLLPDHS LAKAKVLAD+F VFQALS+GLLVGI++IGSFSFSGA+WPFQAVDTIIVLGAVTT                       GLT VVAHQI+G
Sbjct:    3 LPVLMFGIPIVVDFWVQSLPMHLLPDHSLLAKAKVLADEFNVFQALSMGLLVGIALIGSFSFSGARWPFQAVDTIIVLGAVTTRVSFAVRARFVCLLGGNFWNPKVGLTSVVAHQIIG 120          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10398.378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JMA3_9PHAE7.210e-13575.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSN7_ECTSI1.550e-7291.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSN6_ECTSI8.120e-6073.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JML4_9PHAE1.040e-4472.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..151
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 231..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 209..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 198..208
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 204..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10398contigEcto-sp13_S_contig10398:2..3027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10398.378.1mRNA_Ecto-sp13_S_contig10398.378.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10398 2..3027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10398.378.1 ID=prot_Ecto-sp13_S_contig10398.378.1|Name=mRNA_Ecto-sp13_S_contig10398.378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=231bp
MTACVRGCRHPLWGGNGACSTLSGASTCLCDSGYASRYSMGSSSCVPRSV
LVAAYATIAVTSLFTSIFLLWHANKFRQLSRLHQSTRSALMRFRVLLCGS
FFAVGTACNFSLATAMGGSLSLPELYVLQTNYAVFIPVLMFGIPIVVDFW
VQSLPMHLLPDHSFLAKAKVLADKFKVFQALSIGLLVGISVIGSFSFSGA
KWPFQAVDTIIVLGAVTTAGLTGVVAHQIVG
back to top