prot_Ecto-sp13_S_contig1037.362.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1037.362.1
Unique Nameprot_Ecto-sp13_S_contig1037.362.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length349
Homology
BLAST of mRNA_Ecto-sp13_S_contig1037.362.1 vs. uniprot
Match: A0A6H5KMS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS2_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 1.030e-141
Identity = 260/299 (86.96%), Postives = 268/299 (89.63%), Query Frame = 0
Query:    1 MVDRRRTPVRLIFGFLFLTRKEGCVGFVANLAAQQHPQQRHRSCSWGQEDHHHAHRGVAATVXXXXXXVTATRTAEHRAIASRTALHATGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDDGEPFPRLEDSRKVEEPRGIGTLFESEDEVIRELSSEEYTDLLRDWAPIASFASVEAIDAKVKEDAAGILTVLRGMAEWQPKRNSDYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGE 299
            MV RRR PVRL+FGFL LTRKEGCVGFVANLAAQQHPQQ                       XXXXXX TATRTA HRAIASRTAL+ATGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGD GEPFPRLED++KVEEPRGIGTLFESEDE+IRELSSEEYT+LLRDWAPIASFASVEAID KVKE+AA ILTVLRGMAEWQPKRN+DYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGE
Sbjct:    1 MVRRRRIPVRLVFGFLLLTRKEGCVGFVANLAAQQHPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATRTAAHRAIASRTALYATGFGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDAGEPFPRLEDAKKVEEPRGIGTLFESEDELIRELSSEEYTNLLRDWAPIASFASVEAIDTKVKEEAACILTVLRGMAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGE 299          
BLAST of mRNA_Ecto-sp13_S_contig1037.362.1 vs. uniprot
Match: D7FI60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI60_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 9.320e-61
Identity = 93/95 (97.89%), Postives = 95/95 (100.00%), Query Frame = 0
Query:  206 MAEWQPKRNSDYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGEG 300
            MAEWQPKRNSDYTK+GSKWSFGAPIGAIKGGQVDALACL+VSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGEG
Sbjct:    1 MAEWQPKRNSDYTKVGSKWSFGAPIGAIKGGQVDALACLEVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGEG 95          
BLAST of mRNA_Ecto-sp13_S_contig1037.362.1 vs. uniprot
Match: A0A0G4F895_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F895_VITBC)

HSP 1 Score: 149 bits (376), Expect = 1.410e-39
Identity = 74/159 (46.54%), Postives = 104/159 (65.41%), Query Frame = 0
Query:  139 EDSRKVEEPRGIGTLFESEDEVIRELSSEEYTDLLRDWAPIASFASVEAIDAKVKEDAAGILTVLRGMAEWQPKRNSDYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKAR 297
            E S      + +GTLF+SEDE IREL S+E+ D +R WAP+++F   E  +A  +E+      VL+ MAEW+P R+  Y      W FGAP+GA KGGQ+DA+ACL++SE DGVVV +I  NP+ +G+ GNA +WL KG+  +C +RL + + I P  R
Sbjct:   58 ESSADPSRAQALGTLFKSEDEEIRELGSDEFLDTMRLWAPMSNFVVNEG-NASSREEGNATRLVLQQMAEWKPPRSGSYLGKTPDWRFGAPVGAFKGGQLDAVACLEISESDGVVVRYIVLNPLNIGVEGNAADWLIKGMAFICRERLGMRLDIYPLMR 215          
BLAST of mRNA_Ecto-sp13_S_contig1037.362.1 vs. uniprot
Match: A0A835Z8Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.900e-29
Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = 0
Query:  206 MAEWQPKRNSDYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGE 299
            M +W P R  D+ + GS W+F AP+ A K G +DA+ACL+V+E+DG+ + W+C NP  LG+PGN++ WL KGI  L GKRLD+ V   P ARGE
Sbjct:    1 MQKWAPARKGDFRQEGSGWAFAAPVAAFKAGNLDAVACLEVTEEDGITIAWLCENPSYLGVPGNSIAWLVKGIETLVGKRLDMAVQELPTARGE 94          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1037.362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KMS2_9PHAE1.030e-14186.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI60_ECTSI9.320e-6197.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4F895_VITBC1.410e-3946.54Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A835Z8Z3_9STRA1.900e-2952.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..348
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1037contigEcto-sp13_S_contig1037:9858..12173 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1037.362.1mRNA_Ecto-sp13_S_contig1037.362.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1037 9858..12173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1037.362.1 ID=prot_Ecto-sp13_S_contig1037.362.1|Name=mRNA_Ecto-sp13_S_contig1037.362.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=349bp
MVDRRRTPVRLIFGFLFLTRKEGCVGFVANLAAQQHPQQRHRSCSWGQED
HHHAHRGVAATVTVAAAAVTATRTAEHRAIASRTALHATGFGPPPPPPRR
ASTPHPSTGAYYPSDDDEDSSSSEPPPDGDDGEPFPRLEDSRKVEEPRGI
GTLFESEDEVIRELSSEEYTDLLRDWAPIASFASVEAIDAKVKEDAAGIL
TVLRGMAEWQPKRNSDYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDD
GVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKARGEG
GGGGQGAAGGGGGGGGGGYGARGGGGGGKGKRSSGGGGKKKSGSKKRR*
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