prot_Ecto-sp13_S_contig10352.348.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10352.348.1
Unique Nameprot_Ecto-sp13_S_contig10352.348.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length485
Homology
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: A0A6H5JN56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN56_9PHAE)

HSP 1 Score: 524 bits (1349), Expect = 1.650e-169
Identity = 264/297 (88.89%), Postives = 274/297 (92.26%), Query Frame = 0
Query:    1 MYEPITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRKGKASKGIAPWRRKDKGGKKGGGTDHESSTTRINVKVKGKGGSAAKKRGTPAXXXXXXXXXXXXXXXXTVTTQINVRVKVSPKTKRA 297
            MYEPITPDDLVRKEWTDKA+CPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPG+LKVVIHHGAKRA+LAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRKGKASKG+APWRRKDKGGKKGGGTD ++ TTRINVK+ G+GGSA KKRGT +                T TT+INVRVKVSPK KRA
Sbjct:  301 MYEPITPDDLVRKEWTDKAKCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPGILKVVIHHGAKRASLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRKGKASKGVAPWRRKDKGGKKGGGTDTDNGTTRINVKINGEGGSATKKRGTASGKKAAESSEVEEDE--TATTEINVRVKVSPKAKRA 595          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: D7FUS9_ECTSI (DNA repair protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS9_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 8.240e-162
Identity = 237/246 (96.34%), Postives = 242/246 (98.37%), Query Frame = 0
Query:    1 MYEPITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRKGKASKGIAPWRRKDKGGKKGGGTDHESSTTRINVK 246
            MYEPITPDDLVRKEWT+KA CPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQW SELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRKGKA+KG+APWRRKDKGGKKGGGTD ++ TTRINVK
Sbjct:   87 MYEPITPDDLVRKEWTEKANCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWHSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRKGKAAKGVAPWRRKDKGGKKGGGTDADNGTTRINVK 332          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: A0A836CRA2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA2_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.130e-63
Identity = 121/216 (56.02%), Postives = 155/216 (71.76%), Query Frame = 0
Query:    1 MYEPITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQE-KLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMG---PGGA-SKESRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRK 211
            +Y+PI PDDL+RK W  KA  P ++++ LLPYQ EGL W+L+QE + +++GGILADEMG  KT+QAI  ++ANR + KDK     W  +E  M     G A +   RGGTLV+CP IAL QW++E+ RFV+ G L VV +HGA RA     L  ADVVLTTYA+V+ ++R+  A  KV CPDCGK LYPDK+F+HRKYFCG+ A+RT AQAKTQRK
Sbjct:   48 LYQPINPDDLIRKAWDKKAPQPPELLSPLLPYQLEGLGWLLHQELEEEHRGGILADEMG--KTIQAISLMLANRPHAKDKQQCSAWTAAEAGMEFPTLGNADTAPRRGGTLVICPLIALTQWRAEIERFVEDGGLSVVTYHGADRAKGTRGLADADVVLTTYAVVQADYRRMVAKRKVKCPDCGKALYPDKLFLHRKYFCGEGAERTAAQAKTQRK 261          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: A0A7S1XLE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLE0_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.460e-63
Identity = 114/210 (54.29%), Postives = 144/210 (68.57%), Query Frame = 0
Query:    4 PITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMG--PGGASKESRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRK 211
            P+ P++ VR  WT+KA  P DI   LLPYQ EGLAWML+QEK D++GGILADEMGMGKTLQ I T+VA+R   +       WA +E   G  P  A    R GTLV+CP IAL QW++E+ +F   G L VV++HGAKR     +L  ADVVLTTY++V  ++ K  A  K+ CPDCG+  YPDK  +H++YFCGD AQRTEAQ+ TQR+
Sbjct:  259 PVDPNECVRAAWTEKAATPVDIRLPLLPYQQEGLAWMLHQEKSDHRGGILADEMGMGKTLQTIATMVAHRPGPEHA---RAWAAAERTHGLTPDAAG---RCGTLVICPVIALLQWKAEIEKFTHEGALNVVVYHGAKRTKDLAELRRADVVLTTYSVVMADYNKVMAPTKITCPDCGRRFYPDKYRLHKQYFCGDDAQRTEAQSLTQRR 462          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: A0A7R9U350_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U350_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.740e-62
Identity = 110/207 (53.14%), Postives = 143/207 (69.08%), Query Frame = 0
Query:    5 ITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRK 211
            + PD  VRK WT+K   P DI   LLPYQ EGLAWM++QE+ D++GGILADEMGMGKTLQ I TIV NR   + +     W ++E + G     +  R GTLV+CP IAL QW++E+ +F +   L V+I+HG KR +   +L +ADVVLTTY++V+ ++ K  A  K++CPDCGK  YPDK  +HRKYFCG  AQRT AQA TQR+
Sbjct:  286 VEPDACVRKAWTEKRATPKDIKLPLLPYQQEGLAWMIHQEESDHRGGILADEMGMGKTLQTIATIVENRPGPEHEAA---WTEAERKHGLD-PDQRVRCGTLVICPVIALLQWRAEIEKFTRENCLNVMIYHGQKRTSDVRELQAADVVLTTYSVVQADYSKVLAPTKISCPDCGKRFYPDKFRLHRKYFCGAQAQRTSAQALTQRR 488          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: A0A7S3MHT9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHT9_9STRA)

HSP 1 Score: 218 bits (556), Expect = 2.960e-58
Identity = 115/224 (51.34%), Postives = 143/224 (63.84%), Query Frame = 0
Query:    3 EPITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKES---------------RGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRK 211
            EPI PD+LVRK W        +++  LLPYQ EGL WM+NQE+ D  GGILADEMGMGKT+QAI  ++ NR +  D      WA S+        +  S               R GTL+V PT+A++QWQ+E+ARF K G L V ++HG+ R T A DLT  D+VLT+Y I+E E+RKA AG KV C  C K  YPDK+ VHRKYFCG+SAQRT AQA TQ+K
Sbjct:  123 EPIDPDELVRKAWEKPVEPSPNLLMPLLPYQKEGLGWMVNQEQNDVHGGILADEMGMGKTIQAIALMLQNRPDMSDFAQLREWAASDARHAAPAIADSSTSSTSSSSECPEPMVRCGTLIVLPTVAIRQWQTEIARFTKEGSLTVKVYHGSDRNTSALDLTKTDIVLTSYKILEIEYRKATAGTKVTCRVCQKKFYPDKLRVHRKYFCGESAQRTAAQALTQKK 346          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: W7TXY3_9STRA (Snf2 super family n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXY3_9STRA)

HSP 1 Score: 217 bits (553), Expect = 6.040e-58
Identity = 110/214 (51.40%), Postives = 147/214 (68.69%), Query Frame = 0
Query:    3 EPITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRKGKASK 216
            +PI   +LVRKEWT +   P+ ++  +LPYQ EGL WM  QE++++ GGILADEMGMGKT+QAI  ++ANR ++   +  E W + E   G        R GTLVVCP IAL QWQ+E+ARF + G L V+++HG+ R      L  ADVVLTTY+IVE E+RK  + +KV C DCGK  YPDK+ +H++YFCG+ A  T AQA+TQRKG++ K
Sbjct:  200 KPIDASELVRKEWTTQREPPETLVLPILPYQKEGLGWMYRQEQVEHHGGILADEMGMGKTIQAIAVMLANRPSE---LHSEAWTRQEASHGRA-PDPCMRAGTLVVCPLIALLQWQTEIARFTREGSLTVLVYHGSSREDAKALLQQADVVLTTYSIVEAEYRKMMSPEKVKCEDCGKRFYPDKLRLHKRYFCGEGAVLTAAQARTQRKGRSVK 409          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: A0A0P1AXV8_PLAHL (Nucleotide excision repair protein RAD16 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXV8_PLAHL)

HSP 1 Score: 190 bits (483), Expect = 1.020e-48
Identity = 102/209 (48.80%), Postives = 126/209 (60.29%), Query Frame = 0
Query:    4 PITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESR-GGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRK 211
            P+T D  ++K    + +    + ATLLPYQ E LAWM+ QE  DYKGGILADEMGMGKTLQ I  ++ N                  E+G G     S  GGTLVVCP +A+ QW+SE+ RFV PG L V IHHG KR    + + S D+VLTTY+I+E+E RK     KVAC  CGK   PDK+  H KYFCG +A++T  Q K Q K
Sbjct:  396 PLTDDHFIKKGRMPEKQPSKYLTATLLPYQREALAWMVEQEASDYKGGILADEMGMGKTLQTISLLLENV----------------REVGSGSKKSSSMVGGTLVVCPLVAVMQWKSEIERFVAPGHLSVYIHHGGKRIDSVKSIASYDIVLTTYSIIESEIRKTLGWSKVACKYCGKKYLPDKLESHNKYFCGPNAKKTALQGKQQNK 588          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: A0A3R7G843_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G843_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.370e-48
Identity = 99/196 (50.51%), Postives = 126/196 (64.29%), Query Frame = 0
Query:   12 RKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAK 207
            ++ W  + +    + A LLPYQ E LAWM+ QE+ DYKGGILADEMGMGKT+QAI  I+ N V +KD     + AK        G S   RGGTLVVCP +A+ QW+SE+ RFV+ G L V IHHG KR  +   + + D+VLTTY+I+E+E RK     KVAC  CGK   PDK+  H KYFCG +A++T  Q K
Sbjct:  275 KRSWMPEKQPSKHLTAELLPYQREALAWMVGQEESDYKGGILADEMGMGKTIQAISLILEN-VRQKDTPASMKGAKR-------GKSSIIRGGTLVVCPLVAVMQWKSEIERFVEHGHLSVYIHHGPKRLDIVAKIAAYDIVLTTYSIIESEIRKTLGWSKVACKYCGKKYLPDKLISHNKYFCGPNARKTVLQDK 462          
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Match: A0A484DZW1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZW1_BRELC)

HSP 1 Score: 190 bits (482), Expect = 1.390e-48
Identity = 98/187 (52.41%), Postives = 127/187 (67.91%), Query Frame = 0
Query:   25 IMATLLPYQAEGLAWMLNQEKLDYKGGILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKESRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSADVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQRTEAQAKTQRK 211
            + A LLPYQ E LAWM+ QE  DYKGGILADEMGMGKT+QAI  ++ N+  +K K++  + A S++         ++ GGTLVVCP +A+ QW+SE+ RFV+PG L + IHHG KR  L + + S DVVLTTY+I+E+E RK     KVAC  CGK   PDK+  H KYFCG +A++T  Q K Q K
Sbjct:  402 LTAILLPYQREALAWMVKQEASDYKGGILADEMGMGKTVQAISLLLENK--QKSKLIGNKSATSQK--------MQTVGGTLVVCPLVAVMQWKSEIERFVEPGHLSIYIHHGVKRFDLIKKIASHDVVLTTYSIIESEFRKTLGWSKVACKFCGKKYLPDKLVSHNKYFCGPNAKKTALQGKQQSK 578          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10352.348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN56_9PHAE1.650e-16988.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUS9_ECTSI8.240e-16296.34DNA repair protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A836CRA2_9STRA1.130e-6356.02P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1XLE0_9STRA1.460e-6354.29Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7R9U350_9STRA3.740e-6253.14Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3MHT9_9STRA2.960e-5851.34Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W7TXY3_9STRA6.040e-5851.40Snf2 super family n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A0P1AXV8_PLAHL1.020e-4848.80Nucleotide excision repair protein RAD16 n=1 Tax=P... [more]
A0A3R7G843_9STRA1.370e-4850.51Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A484DZW1_BRELC1.390e-4852.41Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 25..291
e-value: 1.7E-9
score: 47.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 42..166
score: 10.402
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 8..175
e-value: 1.2E-27
score: 98.3
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 47..165
e-value: 6.6E-25
score: 87.6
NoneNo IPR availablePANTHERPTHR45626:SF12DNA REPAIR PROTEIN RAD16coord: 19..219
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 19..219
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 19..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10352contigEcto-sp13_S_contig10352:28..5219 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10352.348.1mRNA_Ecto-sp13_S_contig10352.348.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10352 2..5273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10352.348.1 ID=prot_Ecto-sp13_S_contig10352.348.1|Name=mRNA_Ecto-sp13_S_contig10352.348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=485bp
MYEPITPDDLVRKEWTDKARCPDDIMATLLPYQAEGLAWMLNQEKLDYKG
GILADEMGMGKTLQAICTIVANRVNKKDKVMQERWAKSEEEMGPGGASKE
SRGGTLVVCPTIALKQWQSELARFVKPGVLKVVIHHGAKRATLAEDLTSA
DVVLTTYAIVENEHRKAYAGDKVACPDCGKTLYPDKMFVHRKYFCGDSAQ
RTEAQAKTQRKGKASKGIAPWRRKDKGGKKGGGTDHESSTTRINVKVKGK
GGSAAKKRGTPASGKKAAESSEEEEEDETVTTQINVRVKVSPKTKRAAAA
AAKKKKTGPRGSSRDSSDDDEDDFEEPSANSKKRKSTAGGGRGGGVSAEG
GTTPMMEKEGRRPTSQRGSAAVRARRKGMAPRSRRGSPGVMGMTTAIGKG
LPISLRRRARGRTRRRREGRRRRRRAGGLRESEPPASRRASGASPARSRT
LTAAAAMTTRTPATAAAAVPKPRRKPRSPRSSRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase