prot_Ecto-sp13_S_contig10345.342.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10345.342.1
Unique Nameprot_Ecto-sp13_S_contig10345.342.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length274
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10345.342.1 vs. uniprot
Match: D7G2K9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2K9_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.230e-39
Identity = 131/178 (73.60%), Postives = 132/178 (74.16%), Query Frame = 0 
Query:    1 MEGKREDESMRQFNKRVREGTAQLLKEEFKEHSSTNKRRKKYLDDKKRKNKLKKQGLWEEVQRRERLDEDHAAAGFDGADRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNWGVLGRADDDEGAAQLLQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQAAAA 178
            MEGKREDESMRQFNKRVREGTAQLLK+EFKEHSSTNK                   LW                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  WGVLGRADDDEGAAQLLQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQAAAA
Sbjct:  104 MEGKREDESMRQFNKRVREGTAQLLKDEFKEHSSTNKXXXXXXXXXXXXXXXXXXXLWXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGVLGRADDDEGAAQLLQKERIRFGEVAHAPPDLAKIPKPRGFKDQGQAKPWARQAAAA 280
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BLAST of mRNA_Ecto-sp13_S_contig10345.342.1 vs. uniprot
Match: A0A835YUV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUV8_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.410e-5
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 0 
Query:    4 KREDESMRQFNKRVREGTAQLLKEEFKEHSSTNKRRKKYLDDKKRKNKLKKQGLWEE 60
            KR DES+R+FN+RVR+  A+ LK+  K  SST  RRKK+L +K +K KL++QGLWEE
Sbjct:  102 KRTDESLREFNERVRKVAAEALKDNAKRASSTVARRKKHLAEKSQKKKLQRQGLWEE 158
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10345.342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2K9_ECTSI1.230e-3973.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUV8_9STRA1.410e-557.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 233..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10345contigEcto-sp13_S_contig10345:2746..4805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10345.342.1mRNA_Ecto-sp13_S_contig10345.342.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10345 2122..5522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10345.342.1 ID=prot_Ecto-sp13_S_contig10345.342.1|Name=mRNA_Ecto-sp13_S_contig10345.342.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MEGKREDESMRQFNKRVREGTAQLLKEEFKEHSSTNKRRKKYLDDKKRKN
KLKKQGLWEEVQRRERLDEDHAAAGFDGADRGGGGGGGGAGGSGGPAGPG
RHGGGGGGGGGGGGGGGNNWGVLGRADDDEGAAQLLQKERIRFGEVAHAP
PDLAKIPKPRGFKDQGQAKPWARQAAAAAVGGMGDTSSSSGASTGNQGES
QGQQKKAKRNRRNNAAGGRGDEKQRQEPRAMKAEAKKAQNRQMEEMRQRV
QEAYSGLKKKRRAGQTQFVGSDL*
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