prot_Ecto-sp13_S_contig10344.341.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10344.341.1
Unique Nameprot_Ecto-sp13_S_contig10344.341.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length137
Homology
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: D7FLN1_ECTSI (Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN1_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 4.780e-65
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0
Query:    1 MSSASVVQGSRRLEVAPARFRRKRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEV 122
            MSSASVVQGSRRLEVAPARFRRKRVRVRELLASGTS+VGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEV
Sbjct:  290 MSSASVVQGSRRLEVAPARFRRKRVRVRELLASGTSVVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEV 411          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: A0A835YW11_9STRA (Asparagine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW11_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.040e-28
Identity = 64/109 (58.72%), Postives = 85/109 (77.98%), Query Frame = 0
Query:   15 VAPARFRRKRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSK-GAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEV 122
            VAPA++RR+RVRV+ELLA G +  G+  VV+GWL+TAR+ +K  LLFLVV+DGSC  ++QVV S+ G  GF AAASCGGVGA V+V G ++ S  KGQ +E++A +VEV
Sbjct:  266 VAPAKYRRRRVRVKELLARGAAAAGETVVVRGWLKTARSGAKDTLLFLVVNDGSCHSSLQVVASRDGTEGFAAAASCGGVGACVAVEGPIIESPAKGQVIEMQAKKVEV 374          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: A0A7S2WSY6_9STRA (Asparagine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSY6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 5.320e-24
Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 0
Query:   16 APA-RFRRKRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAAS--CGGVGASVSVLGTVVASKGKGQDVEIKADEVEV 122
            APA RF+RKR+R+ EL+  GT+LVG+  VV+GW +T R A KG++LF+ + DGS SG VQVVV  G  GF+AA    CGG  AS S+ G VV S+G GQ +E++A +VEV
Sbjct:   24 APAMRFKRKRIRIAELMQLGTTLVGKTVVVQGWAKTIREAGKGSILFIQLSDGSSSGDVQVVVDAGVEGFEAARPNVCGGTDASFSISGKVVESQGAGQSIELQAVKVEV 133          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: T0QBP1_SAPDV (Asparagine--tRNA ligase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QBP1_SAPDV)

HSP 1 Score: 104 bits (260), Expect = 1.350e-23
Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 0
Query:   20 FRRKRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEV 120
            F+R+RVRV+ELLA+G S VG    VKGW +T R A  GA  FL ++DGSC   +Q+VV+K  PGF+A  + GG GAS  V+GTVV S  KGQ +E+KA EV
Sbjct:   33 FKRRRVRVKELLAAGLSTVGHTVTVKGWAKTLREAGAGAFAFLELNDGSCFTGLQIVVAKDVPGFEALINSGGTGASFCVVGTVVESPAKGQLIEVKATEV 133          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: A0A485KAR3_9STRA (Asparagine--tRNA ligase n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485KAR3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.850e-23
Identity = 56/103 (54.37%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   20 FRRKRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEV 122
            F+R+RVRV+ELL +G SLVGQ   +KGW +T R A  GA  FL ++DGSC   VQVVV+K  PGF+   + GG GAS +++G VV S  KGQ +EIKA  V V
Sbjct:   33 FKRRRVRVKELLGAGLSLVGQSVTIKGWAKTLREAGAGAFCFLEINDGSCFTGVQVVVNKDIPGFEDVINSGGTGASFAIVGDVVESPAKGQLIEIKATHVTV 135          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: A0A662YCZ1_9STRA (Asparagine--tRNA ligase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YCZ1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 6.140e-23
Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = 0
Query:   20 FRRKRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKG-APGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEV 122
            FRR RVRV+ELLA G +L GQ   VKGW +T R A  GA  FL + DGSC   VQ+V+SK    GF  A + GGVGAS SV+GTVV S  KGQ+VE+KA +V V
Sbjct:   17 FRRNRVRVKELLAGGLALEGQTVTVKGWAKTLREAGAGAFAFLELSDGSCFAGVQIVISKEETEGFADAMASGGVGASFSVVGTVVKSPAKGQEVEVKATKVTV 120          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: A0A024G7W7_9STRA (Asparagine--tRNA ligase n=2 Tax=Albugo TaxID=65356 RepID=A0A024G7W7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.730e-21
Identity = 55/109 (50.46%), Postives = 75/109 (68.81%), Query Frame = 0
Query:   15 VAPARFRRKRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKG-APGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEV 122
            V  A FRR R+RV++L AS  + + +   VKGW +T R A  G+  FL ++DGSC  ++QVV++KG   GF AA + GGVGAS SV+G VV S  KGQ++EIKA +V+V
Sbjct:    5 VTSALFRRDRIRVKDLFASSLTSLNEVVTVKGWSKTLREAGAGSFAFLQLNDGSCFRSIQVVITKGETEGFAAALASGGVGASFSVVGKVVESPAKGQEIEIKASKVDV 113          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: A0A6A5A6A1_9STRA (AA_TRNA_LIGASE_II domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6A1_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.150e-20
Identity = 51/100 (51.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:   23 KRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEVEV 122
            +RVRV+ELL +G SLVGQ   +KGW +T R A  GA +FL ++DGS    VQV+V +  PGF+   + GG GAS S++G VV S  KGQ +E+KA  V V
Sbjct:    1 RRVRVKELLGAGLSLVGQSVTIKGWAKTLREAGAGAFVFLEINDGSSFTGVQVLVKQDIPGFEDVINSGGTGASFSIVGDVVESPAKGQLIEVKATHVTV 100          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: A0A1Z8UZH7_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Puniceispirillum sp. TMED52 TaxID=1986639 RepID=A0A1Z8UZH7_9PROT)

HSP 1 Score: 77.8 bits (190), Expect = 1.480e-15
Identity = 42/103 (40.78%), Postives = 67/103 (65.05%), Query Frame = 0
Query:   19 RFRRKRVRVRELLASGTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVVSKGAP-GFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKADEV 120
            ++RR R+R++ELL  G S +  + +VKGW+RT+R+A KGA++F+ + DGS    +Q+V +     G    A+CGGVGAS+S +G VV   G    +E++  +V
Sbjct:    4 KWRRGRIRIKELLQQGVSAIDSEVIVKGWIRTSRSAEKGAIMFVELTDGSTVKGLQLVATMATTIGSQELANCGGVGASLSAVGKVVKCDGGKTPIEVQVYKV 106          
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Match: A0A7S2R1X4_9STRA (Asparagine--tRNA ligase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R1X4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.080e-15
Identity = 44/101 (43.56%), Postives = 69/101 (68.32%), Query Frame = 0
Query:   20 FRRKRVRVRELLAS-GTSLVGQKAVVKGWLRTARAASKGALLFLVVDDGSCSGTVQVVV-SKGAPGFDAAASCGGVGASVSVLGTVVASKGKGQDVEIKAD 118
            ++R R+RV+E+LA+ G + +G+   V GW RT R A+KG LLF+ ++DGS   ++Q ++ S    G++ +   GG G+S  + GT+VAS+G GQ VE+KAD
Sbjct:  238 YKRNRIRVKEVLANDGANFMGKTVTVAGWTRTTRNANKGLLLFIELNDGSTGQSLQCILESDKTEGYEESKLSGGAGSSFQITGTIVASQGDGQSVELKAD 338          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10344.341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLN1_ECTSI4.780e-6599.18Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YW11_9STRA1.040e-2858.72Asparagine--tRNA ligase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WSY6_9STRA5.320e-2454.55Asparagine--tRNA ligase n=1 Tax=Rhizochromulina ma... [more]
T0QBP1_SAPDV1.350e-2355.45Asparagine--tRNA ligase n=2 Tax=Saprolegniaceae Ta... [more]
A0A485KAR3_9STRA1.850e-2354.37Asparagine--tRNA ligase n=7 Tax=Aphanomyces TaxID=... [more]
A0A662YCZ1_9STRA6.140e-2357.69Asparagine--tRNA ligase n=2 Tax=Nothophytophthora ... [more]
A0A024G7W7_9STRA3.730e-2150.46Asparagine--tRNA ligase n=2 Tax=Albugo TaxID=65356... [more]
A0A6A5A6A1_9STRA4.150e-2051.00AA_TRNA_LIGASE_II domain-containing protein (Fragm... [more]
A0A1Z8UZH7_9PROT1.480e-1540.78Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A7S2R1X4_9STRA3.080e-1543.56Asparagine--tRNA ligase (Fragment) n=1 Tax=Eucampi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 14..128
e-value: 5.0E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR22594:SF46ASPARAGINYL(N) AMINO-ACYL TRNA SYNTHETASEcoord: 25..122
NoneNo IPR availablePANTHERPTHR22594ASPARTYL/LYSYL-TRNA SYNTHETASEcoord: 25..122
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 43..122
e-value: 5.4E-11
score: 42.3
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 35..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10344contigEcto-sp13_S_contig10344:436..1863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10344.341.1mRNA_Ecto-sp13_S_contig10344.341.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10344 61..2308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10344.341.1 ID=prot_Ecto-sp13_S_contig10344.341.1|Name=mRNA_Ecto-sp13_S_contig10344.341.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp
MSSASVVQGSRRLEVAPARFRRKRVRVRELLASGTSLVGQKAVVKGWLRT
ARAASKGALLFLVVDDGSCSGTVQVVVSKGAPGFDAAASCGGVGASVSVL
GTVVASKGKGQDVEIKADEVEVGVIQNNKILEGNTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004365NA-bd_OB_tRNA
IPR012340NA-bd_OB-fold