prot_Ecto-sp13_S_contig1032.317.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1032.317.1
Unique Nameprot_Ecto-sp13_S_contig1032.317.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length189
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1032.317.1 vs. uniprot
Match: D7FVZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ2_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 6.390e-108
Identity = 170/189 (89.95%), Postives = 175/189 (92.59%), Query Frame = 0 
Query:    1 MMHPAPVLMVVLAATRFSGAICFTMVTPRSSPSRHVRHV-SSVTTNRLAASSPPLSSSYSTTHTDGSMFAPMEARAVPSLARWQSRLGASGETLGEEGIANPPEESEVTSSGGATTSEPGAGGSGVDLSKGIAFEAPKPKALEPENAEDESESKKVRVIIYTVLSLVPFVLLLPFLGGRELMPLDPSQM 188
            MMHPAPV M VLAATRFSG+ICFTMVTPRSS SRHVRH+ SS TT RLAA+SPP SSSYSTTHTD SMFAPMEARAVPSL RWQSRLGASGETLGEEGIANP EESE TSSGGAT SEPG GGSGVDLSKGIAFEAPKPKALEPE AE+ES+SKKVRVIIYTVLSLVPFVLLLPFLGGRELMPLDPSQM
Sbjct:    1 MMHPAPVFMAVLAATRFSGSICFTMVTPRSSSSRHVRHMASSATTERLAATSPPSSSSYSTTHTDSSMFAPMEARAVPSLDRWQSRLGASGETLGEEGIANPSEESEATSSGGATNSEPGGGGSGVDLSKGIAFEAPKPKALEPEKAEEESDSKKVRVIIYTVLSLVPFVLLLPFLGGRELMPLDPSQM 189
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1032.317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FVZ2_ECTSI6.390e-10889.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 177..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..156
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.692
NoneNo IPR availableTMHMMTMhelixcoord: 155..177
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1032contigEcto-sp13_S_contig1032:4305..7279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1032.317.1mRNA_Ecto-sp13_S_contig1032.317.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1032 3107..7279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1032.317.1 ID=prot_Ecto-sp13_S_contig1032.317.1|Name=mRNA_Ecto-sp13_S_contig1032.317.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp
MMHPAPVLMVVLAATRFSGAICFTMVTPRSSPSRHVRHVSSVTTNRLAAS
SPPLSSSYSTTHTDGSMFAPMEARAVPSLARWQSRLGASGETLGEEGIAN
PPEESEVTSSGGATTSEPGAGGSGVDLSKGIAFEAPKPKALEPENAEDES
ESKKVRVIIYTVLSLVPFVLLLPFLGGRELMPLDPSQM*
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