prot_Ecto-sp13_S_contig10292.297.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10292.297.1
Unique Nameprot_Ecto-sp13_S_contig10292.297.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length103
Homology
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: D7FHQ9_ECTSI (Translocation protein SEC62 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHQ9_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.100e-64
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
Query:    1 SGNNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 103
            SGNNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV
Sbjct:  104 SGNNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 206          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: A0A835ZAL0_9STRA (Translocation protein SEC62 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL0_9STRA)

HSP 1 Score: 139 bits (351), Expect = 3.100e-38
Identity = 66/103 (64.08%), Postives = 78/103 (75.73%), Query Frame = 0
Query:    1 SGNNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 103
            S +  F   GY+TWI+ GSQ LSHL T  II+GFL ITCFPIWP+ LK+W WY SVTLLV M+ FL+ R L++   W AGYEFW+LPRLFDE+L F ESFTPV
Sbjct:  103 SRDQTFISTGYYTWIYQGSQTLSHLMTTAIIVGFLTITCFPIWPQFLKIWAWYASVTLLVFMIVFLSARALIWLAMWTAGYEFWILPRLFDESLGFCESFTPV 205          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: A0A6V1K7K4_HETAK (Translocation protein SEC62 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7K4_HETAK)

HSP 1 Score: 131 bits (329), Expect = 3.550e-35
Identity = 58/95 (61.05%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    8 PAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTP 102
            P  ++TWI+ G Q  S+  TAL+IIGFLL+TCFPIWP  LK+W+WY+SVTLL+ M+ F+TIR ++F   WI G+EFW+LPRLFD+ L F ESFTP
Sbjct:  103 PKEFYTWIYDGDQTTSYFMTALLIIGFLLLTCFPIWPTFLKIWLWYISVTLLIFMLGFITIRAVIFLIFWIMGFEFWILPRLFDDNLGFTESFTP 197          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: I2CPB5_NANGC (Translocation protein SEC62 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CPB5_NANGC)

HSP 1 Score: 126 bits (317), Expect = 5.500e-33
Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    6 FDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 103
            ++  GY+ WI+ GSQ LS+  T LII GFL ITCFPIWP  LKVW+WY+SVTLL  M+ FL +R L F F W+ GYEFW LP LFDE+L+F +SF P+
Sbjct:  135 YEELGYYAWIYEGSQTLSNFMTFLIIAGFLAITCFPIWPHFLKVWLWYVSVTLLSFMLGFLLLRFLAFLFVWVTGYEFWFLPNLFDESLSFVDSFKPL 232          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: K0TGD9_THAOC (Translocation protein SEC62 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGD9_THAOC)

HSP 1 Score: 124 bits (312), Expect = 1.350e-32
Identity = 57/98 (58.16%), Postives = 73/98 (74.49%), Query Frame = 0
Query:    6 FDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 103
            FD + YFTWI+ G+++ SHL T  +IIGFL  TCFPIWP  LKV++WY+SV++L+ +   +T R LLF F W+ GYEFW LP LFDE+L F ESF PV
Sbjct:  107 FDESAYFTWIYEGNKKFSHLMTTGLIIGFLCCTCFPIWPNFLKVFVWYMSVSMLIFIFFLITARALLFLFVWVMGYEFWFLPNLFDESLGFVESFIPV 204          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: B7G2F8_PHATC (Translocation protein SEC62 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2F8_PHATC)

HSP 1 Score: 124 bits (311), Expect = 1.930e-32
Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 0
Query:    6 FDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 103
            FD AGYFTW++ G + +SHL +A +I+GFL   CFPIWP+ L+V++WYLSVTLL+ +   +T R L F F WI G+EFW LP LFDETL+F +SF PV
Sbjct:  107 FDEAGYFTWVYEGDKTMSHLMSAGLIVGFLFCVCFPIWPQFLRVFVWYLSVTLLLFIFILVTFRALAFLFIWIIGFEFWFLPNLFDETLSFVDSFKPV 204          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: A0A7S2UHV6_9STRA (Translocation protein SEC62 (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHV6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 5.020e-32
Identity = 55/98 (56.12%), Postives = 72/98 (73.47%), Query Frame = 0
Query:    6 FDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 103
            FD AGYFTW++ G +  SH+ T ++I GFL  TCFPIWP  LK+++WY+SV+LL+ M   +T R +LF F WI GY+FW LP LFDE+L F +SF PV
Sbjct:  115 FDEAGYFTWMYEGDKTFSHMMTTVLIGGFLFCTCFPIWPNFLKIFVWYMSVSLLIFMFFLVTTRGVLFLFVWILGYDFWFLPNLFDESLNFTDSFKPV 212          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: A0A6U4IPD0_9STRA (Translocation protein SEC62 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4IPD0_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.980e-31
Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 0
Query:    1 SGNNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTP 102
            S N  FD +GYFTWI+ G +  S++ T L+++GFL  TCFPIWP+ LKV++WY+SVTLL+ +   +T+R  +F   WI G+E WVLP LFDETL F ESF P
Sbjct:  100 SRNRDFDESGYFTWIYEGDKSFSNMMTTLLVVGFLCCTCFPIWPQFLKVFVWYMSVTLLIFIFFLITVRGAVFLCIWILGFECWVLPNLFDETLGFVESFKP 201          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: A0A7R9YBG5_9STRA (Translocation protein SEC62 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBG5_9STRA)

HSP 1 Score: 120 bits (300), Expect = 7.730e-31
Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    3 NNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 103
            +  F   G++TWI+ GSQ +S+L T  +I+GFL  TCFPIWP+ +KVWMWYLSVT ++++   + IR   F   W+ GY+FW+LPR++DETL   ESFTP+
Sbjct:   98 STSFTEDGFYTWIYQGSQTMSNLATVALIVGFLFFTCFPIWPQFMKVWMWYLSVTFILLIFGIIIIRLFFFLLLWLVGYDFWILPRMWDETLGVLESFTPL 198          
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Match: A0A7S1E7X0_9STRA (Translocation protein SEC62 (Fragment) n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7X0_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.040e-30
Identity = 55/98 (56.12%), Postives = 69/98 (70.41%), Query Frame = 0
Query:    6 FDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVWMWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESFTPV 103
            FD AGYFTW++ G +  SHL T  +I GFL  TCFPIWP  LKV++WYLSV+LL+ +   +T+R       WI GYEFW LP LFDETL+F +SF P+
Sbjct:   12 FDEAGYFTWMYEGDKTFSHLMTTGLIAGFLFCTCFPIWPNFLKVFVWYLSVSLLIFIFLLVTVRXXXXXXXWILGYEFWFLPNLFDETLSFVDSFKPL 109          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10292.297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHQ9_ECTSI1.100e-64100.00Translocation protein SEC62 n=2 Tax=Ectocarpus Tax... [more]
A0A835ZAL0_9STRA3.100e-3864.08Translocation protein SEC62 n=1 Tax=Tribonema minu... [more]
A0A6V1K7K4_HETAK3.550e-3561.05Translocation protein SEC62 n=1 Tax=Heterosigma ak... [more]
I2CPB5_NANGC5.500e-3360.20Translocation protein SEC62 n=2 Tax=Nannochloropsi... [more]
K0TGD9_THAOC1.350e-3258.16Translocation protein SEC62 n=1 Tax=Thalassiosira ... [more]
B7G2F8_PHATC1.930e-3258.16Translocation protein SEC62 n=2 Tax=Phaeodactylum ... [more]
A0A7S2UHV6_9STRA5.020e-3256.12Translocation protein SEC62 (Fragment) n=1 Tax=Att... [more]
A0A6U4IPD0_9STRA1.980e-3154.90Translocation protein SEC62 n=1 Tax=Minutocellus p... [more]
A0A7R9YBG5_9STRA7.730e-3151.49Translocation protein SEC62 (Fragment) n=1 Tax=Pin... [more]
A0A7S1E7X0_9STRA1.040e-3056.12Translocation protein SEC62 (Fragment) n=1 Tax=Tha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004728Translocation protein Sec62PFAMPF03839Sec62coord: 4..103
e-value: 2.5E-19
score: 69.7
IPR004728Translocation protein Sec62PANTHERPTHR12443FAMILY NOT NAMEDcoord: 6..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..49
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 22..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10292contigEcto-sp13_S_contig10292:4729..5437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10292.297.1mRNA_Ecto-sp13_S_contig10292.297.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10292 4729..5437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10292.297.1 ID=prot_Ecto-sp13_S_contig10292.297.1|Name=mRNA_Ecto-sp13_S_contig10292.297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=103bp
SGNNQFDPAGYFTWIFLGSQRLSHLFTALIIIGFLLITCFPIWPRILKVW
MWYLSVTLLVIMVTFLTIRCLLFFFAWIAGYEFWVLPRLFDETLAFAESF
TPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004728Sec62