Homology
BLAST of mRNA_Ecto-sp13_S_contig10266.282.1 vs. uniprot
Match:
A0A6H5JUF7_9PHAE (GCFC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF7_9PHAE)
HSP 1 Score: 540 bits (1391), Expect = 5.010e-182
Identity = 348/374 (93.05%), Postives = 352/374 (94.12%), Query Frame = 0
Query: 1 MFKTRKKDPRRRLASKSKTAEDGASEDEAGNVSDASVGTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSFGHXXXXXXXXXXXKAAAGKGVDGVFRVKKSKASKAMAKAAKEKTELPVAPQNDSARGSWHTATAGMYTKEGLAELRSSQAFTPKPSGGRSRERMTRGGNSSNGGEETASGAANERVFAGDEAEMIHEAGQQGDLKEDLNKNDISRLKGRHEALIASREGMGKGAPDSGDGEDFIPLDAKAPVSGATKGLSHDDVNGDGGREXXXXXXXXXXXQVRRGATRPAAKPKPSIPSTSPWGGGSTVATVNXXXXTAASGWGGTPAERPRFLGIDEMQKALREAGTHLRETHERNERQLQVV 374
MFKTRKKDPRRRLASKSKTAEDGASEDEAGNVSDASVGTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VLSFGHXXXXXXXXXXX AAAGKG DG FRVKKSKASKAMAKAAKEKTELPVAPQN+SARGSWHTATAGMYTKEGLAELRSSQAFTPKPSGGRSRERMTRGGNSSNGGEETAS AANERVFAGDEAEMIHEAGQQGDLKEDLNKNDISRLKGRHEAL+ASRE MGKGAPDSGDGEDFIPLDAKAPV GA KGL+HD VNGDGGRE XXXXXX QVRRGATRPAAKPKPSIPSTSPWGGGSTVATVN TA SGWG TP ERPRFLGIDEMQKALREAGT LRETHERNERQLQV+
Sbjct: 1 MFKTRKKDPRRRLASKSKTAEDGASEDEAGNVSDASVGTAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVLSFGHXXXXXXXXXXXXAAAGKGADGFFRVKKSKASKAMAKAAKEKTELPVAPQNNSARGSWHTATAGMYTKEGLAELRSSQAFTPKPSGGRSRERMTRGGNSSNGGEETASAAANERVFAGDEAEMIHEAGQQGDLKEDLNKNDISRLKGRHEALLASREAMGKGAPDSGDGEDFIPLDAKAPVPGARKGLTHDVVNGDGGREDXXXXXXWEEEQVRRGATRPAAKPKPSIPSTSPWGGGSTVATVNVGGGTAGSGWGETPGERPRFLGIDEMQKALREAGTQLRETHERNERQLQVL 374
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10266.282.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M F K T R K K D P R R R L A S K S K T A E D G A S E D E A G N V S D A S V G T A P A P P L P A A A T G D G Q A R P K K M R K K S K A K A E K E V K P V L S F G H E D E E D T G I G V G K A A A G K G V D G V F R V K K S K A S K A M A K A A K E K T E L P V A P Q N D S A R G S W H T A T A G M Y T K E G L A E L R S S Q A F T P K P S G G R S R E R M T R G G N S S N G G E E T A S G A A N E R V F A G D E A E M I H E A G Q Q G D L K E D L N K N D I S R L K G R H E A L I A S R E G M G K G A P D S G D G E D F I P L D A K A P V S G A T K G L S H D D V N G D G G R E D D E E Q Q R W E E E Q V R R G A T R P A A K P K P S I P S T S P W G G G S T V A T V N G G G G T A A S G W G G T P A E R P R F L G I D E M Q K A L R E A G T H L R E T H E R N E R Q L Q V V S W E * 50 100 150 200 250 300 350 Expect = 5.01e-182 / Id = 93.05 Sequence A0A6H5JUF7_9PHAE
Match Name E-value Identity Description
A0A6H5JUF7_9PHAE 5.010e-182 93.05 GCFC domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M F K T R K K D P R R R L A S K S K T A E D G A S E D E A G N V S D A S V G T A P A P P L P A A A T G D G Q A R P K K M R K K S K A K A E K E V K P V L S F G H E D E E D T G I G V G K A A A G K G V D G V F R V K K S K A S K A M A K A A K E K T E L P V A P Q N D S A R G S W H T A T A G M Y T K E G L A E L R S S Q A F T P K P S G G R S R E R M T R G G N S S N G G E E T A S G A A N E R V F A G D E A E M I H E A G Q Q G D L K E D L N K N D I S R L K G R H E A L I A S R E G M G K G A P D S G D G E D F I P L D A K A P V S G A T K G L S H D D V N G D G G R E D D E E Q Q R W E E E Q V R R G A T R P A A K P K P S I P S T S P W G G G S T V A T V N G G G G T A A S G W G G T P A E R P R F L G I D E M Q K A L R E A G T H L R E T H E R N E R Q L Q V V S W E * 50 100 150 200 250 300 350 Score = Sequence PTHR12214
IPR Term IPR Description Source Source Term Source Description Alignment
IPR012890 GC-rich sequence DNA-binding factor PANTHER PTHR12214 GC-RICH SEQUENCE DNA-BINDING FACTOR coord: 1..373
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig10266.282.1 ID=prot_Ecto-sp13_S_contig10266.282.1|Name=mRNA_Ecto-sp13_S_contig10266.282.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR012890 GCFC