prot_Ecto-sp13_S_contig10253.274.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10253.274.1
Unique Nameprot_Ecto-sp13_S_contig10253.274.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: A0A6H5L6T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T0_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 8.740e-30
Identity = 52/74 (70.27%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQEL 74
            M+STDREAL+ALFRSTGGAGWWRR NWDTDA +ATW GV V+ QGRVV L +  NNL+G IP +LG L+AL  L
Sbjct:   19 MSSTDREALIALFRSTGGAGWWRRDNWDTDAVLATWDGVNVNDQGRVVGLSLIRNNLQGPIPSKLGNLSALTAL 92          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: D8LHD4_ECTSI (Putative leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD4_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 2.950e-29
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQELVL 76
            MASTDREAL A+FR TGGAGW RRRNWDTDAA+ TW GV+V++QGRVV L +  NNL+GTIP ELGKLTAL+ L+L
Sbjct:    1 MASTDREALSAVFRLTGGAGWRRRRNWDTDAALETWEGVKVNNQGRVVTLDLPGNNLQGTIPVELGKLTALEALIL 76          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 7.370e-29
Identity = 53/74 (71.62%), Postives = 61/74 (82.43%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQEL 74
            M STDREALV+LFRSTGGAGW RR NWDTDA +ATW+GV V+ QGRVV L +  NNL+G+IP ELGKL AL+ L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.950e-28
Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQEL 74
            MASTDREALVALFRSTGGAGW +R NWDTDAAIATWHGVEV+ QGRVV L +  N+L G IP ELG L+ LQEL
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: D7FXI0_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI0_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 3.370e-27
Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKL 68
            M+STDREAL+ALFRSTGGAGW RR NWDTDA + TWHGV+V+ QGRVV L +  NNL+G IP++LG L
Sbjct:    1 MSSTDREALIALFRSTGGAGWMRRDNWDTDAVLGTWHGVKVNDQGRVVMLSLDQNNLQGHIPRQLGDL 68          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: A0A6H5KVC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC7_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 8.280e-27
Identity = 51/78 (65.38%), Postives = 62/78 (79.49%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQELVLYD 78
            MA  DREALVAL+ +TGGA W  +RNW+T AA++ W+GVEVD QGRVV L +  NNL+GTIP ELG+LTALQ L LY+
Sbjct:   96 MAQPDREALVALYNATGGAKWENKRNWNTRAALSQWYGVEVDSQGRVVTLSLAGNNLQGTIPPELGQLTALQFLHLYE 173          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 2.070e-26
Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQEL 74
            MASTDREAL+ALFRSTGGAGW RR  WDTDA +ATW G EV+ QGRVV LH+++NNL+G IP E G L  LQ L
Sbjct:    1 MASTDREALIALFRSTGGAGWKRRDKWDTDAVLATWDGAEVNDQGRVVGLHLSSNNLQGNIPPEPGDLRQLQRL 74          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 6.620e-26
Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQELVL 76
            MAS DR+ALVALF STGGAGW RR NW+TDA  ATW GV+V+ QGRVV + + +NNL+G IPKELG L  L  L L
Sbjct:    1 MASKDRDALVALFCSTGGAGWTRRDNWNTDADRATWFGVKVNDQGRVVDVDLGSNNLQGPIPKELGALAKLASLCL 76          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: A0A6H5JK91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK91_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.650e-25
Identity = 46/73 (63.01%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQE 73
            MA TDR+ALVAL+R+TGG  W   +NWDTDA + TWHGV+V+ QGRVVKL + +NNLEG IP  LG+L  LQ+
Sbjct:    1 MAQTDRDALVALYRATGGENWRESQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGQLANLQQ 73          
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 2.470e-25
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    1 MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKLHMTNNNLEGTIPKELGKLTALQELVLYDNHL 81
            MA TDR+ALV L+R+TGG  W  R+NWDTDA + TWHGV+V+ QGRVVKL + +NNLEG IP  LGKL  LQ+L L  N L
Sbjct:    1 MAQTDRDALVVLYRATGGENWRERQNWDTDADLKTWHGVDVNDQGRVVKLKLRDNNLEGEIPATLGKLGNLQQLHLSSNKL 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10253.274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6T0_9PHAE8.740e-3070.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD4_ECTSI2.950e-2973.68Putative leucine rich repeat protein n=1 Tax=Ectoc... [more]
A0A6H5KQP2_9PHAE7.370e-2971.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI1.950e-2877.03LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FXI0_ECTSI3.370e-2770.59Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KVC7_9PHAE8.280e-2765.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF46_ECTSI2.070e-2670.27LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KQQ0_9PHAE6.620e-2665.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JK91_9PHAE1.650e-2563.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY3_ECTSI2.470e-2562.96Hypothetical leucine rich repeat protein n=1 Tax=E... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..81
e-value: 3.9E-26
score: 93.4
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 4..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10253contigEcto-sp13_S_contig10253:473..1342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10253.274.1mRNA_Ecto-sp13_S_contig10253.274.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10253 470..1342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10253.274.1 ID=prot_Ecto-sp13_S_contig10253.274.1|Name=mRNA_Ecto-sp13_S_contig10253.274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
MASTDREALVALFRSTGGAGWWRRRNWDTDAAIATWHGVEVDHQGRVVKL
HMTNNNLEGTIPKELGKLTALQELVLYDNHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf