prot_Ecto-sp13_S_contig1023.256.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1023.256.1
Unique Nameprot_Ecto-sp13_S_contig1023.256.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length233
Homology
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: A0A6H5KKT3_9PHAE (U1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKT3_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 6.340e-134
Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0
Query:    1 MSKDLGYKQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPEMAAMMGFGGFGGRSKK 232
            MSKDLGYKQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEG PARRSQKEEFQPAA GAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPEMAAMMGFGGFGG SKK
Sbjct:    1 MSKDLGYKQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGAPARRSQKEEFQPAAPGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPEMAAMMGFGGFGGGSKK 232          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: A0A835ZCC8_9STRA (U1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC8_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.070e-53
Identity = 107/181 (59.12%), Postives = 130/181 (71.82%), Query Frame = 0
Query:    2 SKDLGYKQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREED--RISGALKKPSAEDEFDTRVRE 180
            S DLG KQV NV  RR+WD + YE KAKER+E+GD+ +E           KEEFQPA  GA GPAGS RAYLK R  KVDL S+L KTQV+T+A+  S QGG++CE+CKC LKDSI YLDHINGKKHQR LG+SMRVERS+V  VK++L   + R ED  + SGA +K SA  E++ R+ E
Sbjct:    7 SDDLGDKQVSNV-VRRSWDVELYEKKAKERLERGDEVEEARPASSKAALNKEEFQPAPDGAQGPAGSRRAYLKARTEKVDLESRLHKTQVITSAAASSSQGGYWCEVCKCLLKDSIAYLDHINGKKHQRALGFSMRVERSSVGSVKEKLDKLRARAEDAAKASGAPRK-SAVQEYEERLAE 185          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: A0A7S2WR40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WR40_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.440e-46
Identity = 122/218 (55.96%), Postives = 156/218 (71.56%), Query Frame = 0
Query:   16 RRTWDRDYYEAKAKERI--EQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQDPEMAAMMGFGGFGGRSK 231
            RRTWD   YE KA+ER+  E+G   +   +  P R   ++EF+ A   AAGPAGSARA+L  R R + L    GKTQ++       + GGWYC++C+C LKDS NYLDHINGKKHQR+LG+SMRVERSTV QV +R K+ K+R+ED +S A + P+A + ++ R+  A++ EXXXXXXXXXXXXXXXXXXXXXX  ME  DP++ A MGFGGFGG +K
Sbjct:   13 RRTWDVKEYEKKAQERLAREEGGIVEGDVDDRPVR--DRDEFRRAEDQAAGPAGSARAFLNNRNRALGLEKAAGKTQIIADNGLRQKGGGWYCDVCECLLKDSSNYLDHINGKKHQRKLGFSMRVERSTVGQVSERFKLAKKRKEDEMSVATR-PTAIEAYEQRIAAAQEEEXXXXXXXXXXXXXXXXXXXXXX--MEGMDPDLMAAMGFGGFGGGAK 225          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: W7U2Z2_9STRA (Zinc finger matrin-type protein 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2Z2_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.070e-44
Identity = 105/225 (46.67%), Postives = 134/225 (59.56%), Query Frame = 0
Query:   12 NVESRRTWDRDYYEAKAKERIEQ---GDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQ-------DPEMAAMMGFGGF 226
            NVE RRTWD +++E  AKER+E+   GD  ++K    P    ++EEFQ A AGAAGP GS RAYLK RE  + L  K+GK QVVT +S P QQGG++C+IC+C LKDS+ YLDHINGKKHQ+ LGYSMRVER  V +VK+RL   K+RE+++     +    E   D   ++ E +E                         E         DPEMAA+MGFGGF
Sbjct:   17 NVE-RRTWDLEHFEKIAKERLEKEASGDVEKKK----PGFVRKREEFQAAEAGAAGPEGSKRAYLKHREADLGLEEKVGKIQVVTGSSAPHQQGGYWCDICQCLLKDSMAYLDHINGKKHQKALGYSMRVERVGVDRVKERLNALKRREDEKKKAGPR----ESAIDAYQKKLEKDEAIKAQWKEARKEARINVIQRATKEEESTVEEEGGVDPEMAALMGFGGF 232          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: W2PLF3_PHYPN (U1-type domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PLF3_PHYPN)

HSP 1 Score: 153 bits (386), Expect = 1.770e-42
Identity = 124/236 (52.54%), Postives = 154/236 (65.25%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQ--------------DPEMAAMMGFGGFGGRSK 231
            V NV +R+TWDR +YE  A+ R E      EK+E     +S KEEFQ A  GAAGPAGSARA+LK R  K+ L S +G  +VV +    S+ GG+YCE+C+CGLKDS+ YLDHINGKKH R+LGYSMRVERSTV QVK+RL+   +R+ D +    KK  A ++++ +++ AE+  XXXXXXXXXXXXXXXXXXX                       D EM AMMGFGGFGG  K
Sbjct:   13 VANV-TRQTWDRAHYEKLAQLRAE---GKLEKEETKKVIKSTKEEFQAANEGAAGPAGSARAFLKARTNKMSLESSVGTVKVVKSDDV-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQSASKRKWDPLMA--KKLDAMEDYEKKLKAAEEEXXXXXXXXXXXXXXXXXXXXALEQDKSDDADKKPEAADEALDADAEMMAMMGFGGFGGSKK 241          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: A0A8J5JCN4_9STRA (zf-C2H2_jaz domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCN4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 8.710e-42
Identity = 112/226 (49.56%), Postives = 138/226 (61.06%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQ----DPEMAAMMGFGGFGGRSK 231
            V NV +R+TWDR +YE  A+ R E      EK+E   A +S KEEFQ A  GAAGPAGSARA+LK R  K+ L + +G  +VV +    S+ GG+YCE+C+CGLKDS+ YLDHINGKKH R+LGYSMRVERSTV QVK+RL+ ++           KK  A +E + RV+      XXXXXXXX                   +    D EM AMMGFGGFGG  K
Sbjct:   16 VANV-ARQTWDRAHYEKLAQLRAE---GQLEKEETKKAIKSSKEEFQSANEGAAGPAGSARAFLKARTAKMSLETSVGTVKVVKSEDL-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKNRLQNYE-----------KKLKAAEEEEARVKXXXXXXXXXXXXXXDTLDQDKNDDADKKPEAADEVPDADAEMMAMMGFGGFGGSKK 225          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: A0A3R7GK79_9STRA (U1-type domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GK79_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.480e-41
Identity = 112/238 (47.06%), Postives = 143/238 (60.08%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQ----------------DPEMAAMMGFGGFGGRSK 231
            V NV +R+TWDR++YE  AK R E      E++E     +S KEEFQ A   AAGPAGSARA+LK R  K+ L + +G  +VV +    S+ GG+YCE+C+CGLKDS+ YLDHINGKKH R+LGYSMRVERSTV QVK RL+   +R+ D +    KK     +++ +V+EAE+ E       XXXXXXXX            +                D EM +MMGFGGFGG  K
Sbjct:   13 VANV-ARQTWDREHYEKLAKLRAE---GQLEQEETKKVIKSSKEEFQAADDRAAGPAGSARAFLKARTSKMSLENSVGTVKVVKSDDL-SKNGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKSRLQSASKRKWDPLM--TKKLDTMADYEKKVKEAEEEEARIKRQKXXXXXXXXLGDQQTSEVKSEKATDKKPEAEDEAVPDADTEMMSMMGFGGFGGSKK 243          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: A0A0P1ATE8_PLAHL (Zinc finger matrin-type protein 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATE8_PLAHL)

HSP 1 Score: 150 bits (378), Expect = 1.020e-40
Identity = 104/232 (44.83%), Postives = 132/232 (56.90%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXX----------MEFQDPEMAAMMGFGGFGGRSK 231
            V NV  R+TWDR +YE  A+ R E G    EK+       S KEEFQ A   AAGPAGSARA+LK R  K+ L + +G  +VV +    S+  G+YCE+C+C LKDS+ YLDHINGKKH R+LGYSMRVERSTV QVKDRL+   +R+ D +    KK  A +E++ +++ AE+ E                                  +   D EM AMMGFGGFGG  K
Sbjct:   66 VSNV-VRQTWDRAHYEKLAQLRAEGG---VEKETTKKVIHSSKEEFQTADESAAGPAGSARAFLKARTAKMSLETSVGTVKVVKSDEL-SKNSGYYCEVCECSLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKDRLQSAAKRKWDPLM--TKKLDAMEEYEKKLKAAEEAEICLKRQKKEQRKAKKCESEDLSQDRVTAEETVDVVSESDAEMMAMMGFGGFGGSKK 290          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: A0A3M6VG09_9STRA (U1-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VG09_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.870e-39
Identity = 112/240 (46.67%), Postives = 147/240 (61.25%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIE-QGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEXXXXXXXXXXXXXXXXXXXXXXXXMEFQ-----------------DPEMAAMMGFGGFGGRSK 231
            V NV +R+TWDR++YE  A+ R   Q +  Q K        S KEEFQ A  GAAGPAGSARA+LK R  K+ L + +G  +VV +    S+ GG+YCE+C+CGLKDS+ YLDHINGKKH R+LG+SMRVERSTV QVK+RL+   +R+ D I+   KK    ++++ +++  ++ E   XXXXXXXXXXX          M+                   + EM AMMGFGGFGG  K
Sbjct:   14 VANV-ARQTWDREHYEKLAELRANGQFETTQTKK----VIASSKEEFQTANEGAAGPAGSARAFLKARSAKIALENSVGTIKVVKSDEI-SKHGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGFSMRVERSTVDQVKNRLQSASKRKYDFIT--TKKLDTMEDYEKKLKAIKEEEAQAXXXXXXXXXXXKLGKQVSDLVMKHHNVVETISDADDKVPDDTEAEMMAMMGFGGFGGSKK 245          
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Match: A0A6A3XVT7_9STRA (U1-type domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XVT7_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.150e-38
Identity = 84/150 (56.00%), Postives = 107/150 (71.33%), Query Frame = 0
Query:   10 VKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRSQKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQQGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRLKMHKQREED 159
            V NV +R+TWDR++YE  A+ R    D   EK+E      S K+EFQ A  GAAGPAGSARA+LK R  K++L + +G  +VV +    S+ GG+YCE+C+CGLKDS+ YLDHINGKKH R+LGYSMRVERSTV QVK RL+   +R+ D
Sbjct:   13 VANV-TRQTWDREHYEKLAQLRA---DGQLEKEEAKKVINSSKQEFQAANEGAAGPAGSARAFLKARTSKMELETSVGTIKVVKSDDA-SKSGGYYCEVCECGLKDSVAYLDHINGKKHLRKLGYSMRVERSTVDQVKSRLQSASKRKWD 157          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1023.256.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKT3_9PHAE6.340e-13498.71U1-type domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZCC8_9STRA1.070e-5359.12U1-type domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2WR40_9STRA1.440e-4655.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U2Z2_9STRA3.070e-4446.67Zinc finger matrin-type protein 2 n=1 Tax=Nannochl... [more]
W2PLF3_PHYPN1.770e-4252.54U1-type domain-containing protein n=11 Tax=Phytoph... [more]
A0A8J5JCN4_9STRA8.710e-4249.56zf-C2H2_jaz domain-containing protein n=1 Tax=Phyt... [more]
A0A3R7GK79_9STRA1.480e-4147.06U1-type domain-containing protein n=3 Tax=Phytopht... [more]
A0A0P1ATE8_PLAHL1.020e-4044.83Zinc finger matrin-type protein 2 n=1 Tax=Plasmopa... [more]
A0A3M6VG09_9STRA3.870e-3946.67U1-type domain-containing protein n=1 Tax=Peronosp... [more]
A0A6A3XVT7_9STRA1.150e-3856.00U1-type domain-containing protein n=2 Tax=Phytopht... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..209
NoneNo IPR availableGENE3D3.30.160.60coord: 93..135
e-value: 2.2E-7
score: 32.3
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 101..135
e-value: 2.7E-8
score: 43.6
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 104..129
e-value: 1.2E-6
score: 28.6
IPR040107U4/U6.U5 small nuclear ribonucleoprotein component Snu23PANTHERPTHR45986FAMILY NOT NAMEDcoord: 11..231
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 98..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1023contigEcto-sp13_S_contig1023:7050..10010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1023.256.1mRNA_Ecto-sp13_S_contig1023.256.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1023 7050..10505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1023.256.1 ID=prot_Ecto-sp13_S_contig1023.256.1|Name=mRNA_Ecto-sp13_S_contig1023.256.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
MSKDLGYKQVKNVESRRTWDRDYYEAKAKERIEQGDDYQEKDEGGPARRS
QKEEFQPAAAGAAGPAGSARAYLKTRERKVDLSSKLGKTQVVTAASTPSQ
QGGWYCEICKCGLKDSINYLDHINGKKHQRELGYSMRVERSTVSQVKDRL
KMHKQREEDRISGALKKPSAEDEFDTRVREAEDNEERRKRQKREAKRLAK
KKQQEEEEEMEFQDPEMAAMMGFGGFGGRSKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR022755Znf_C2H2_jaz
IPR040107Snu23
IPR036236Znf_C2H2_sf