Homology
BLAST of mRNA_Ecto-sp13_S_contig10208.229.1 vs. uniprot
Match: D8LT37_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT37_ECTSI) HSP 1 Score: 598 bits (1541), Expect = 5.070e-211 Identity = 318/340 (93.53%), Postives = 326/340 (95.88%), Query Frame = 0 Query: 1 VSELLRLISEANLDAFSRHSLEDRANAARNLQAAEVRRMLDLKLSHAAAVNGGACKDEGLKTLNEREATAWAAKLRLKAALNMDRHYASLEPGGLPASLRRRNPTSSHPSDFLDDGTPATPQGAMQTFGRACPPEDNETGAIRHWKRGATETEEVLDLRRDVREWQSSCGRRARFSYLCERWVGVASDIEEKQRQKRMIEAAEGEKRMKERHAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREEGAQLAGGDRYWGLIRELHRLRAIEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQRQIDRLLEM 340
VSELLRLISEANLDAFSRHSLEDRA AA+NLQ +VRRMLDLKLSH+AAVN GACKDEGLK LNEREATAWAAKL+LKAALNMDRHYASLEPGGLPASLRRRNPTSS PSDFLDDGTPATPQGAMQTFGRACPPEDNE+GAIR WKRGA ETEEVLDLRRDVREWQSSCGRRARFS LCERWVGVASDIEEKQRQKRMIEAAE EKRM+ER AAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREE AQLAGGDRYWGLIREL RLR IEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQ+QIDRLLE+
Sbjct: 230 VSELLRLISEANLDAFSRHSLEDRAMAAQNLQVVDVRRMLDLKLSHSAAVNSGACKDEGLKRLNEREATAWAAKLKLKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTPATPQGAMQTFGRACPPEDNESGAIRLWKRGAKETEEVLDLRRDVREWQSSCGRRARFSDLCERWVGVASDIEEKQRQKRMIEAAEREKRMRERQAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREEAAQLAGGDRYWGLIRELQRLRVIEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQQQIDRLLEI 569
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10208.229.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| D8LT37_ECTSI | 5.070e-211 | 93.53 | C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 199..219 |
| None | No IPR available | COILS | Coil | Coil | coord: 244..264 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig10208.229.1 ID=prot_Ecto-sp13_S_contig10208.229.1|Name=mRNA_Ecto-sp13_S_contig10208.229.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp
VSELLRLISEANLDAFSRHSLEDRANAARNLQAAEVRRMLDLKLSHAAAV
NGGACKDEGLKTLNEREATAWAAKLRLKAALNMDRHYASLEPGGLPASLR
RRNPTSSHPSDFLDDGTPATPQGAMQTFGRACPPEDNETGAIRHWKRGAT
ETEEVLDLRRDVREWQSSCGRRARFSYLCERWVGVASDIEEKQRQKRMIE
AAEGEKRMKERHAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEER
KRLEGEELERMSREEGAQLAGGDRYWGLIRELHRLRAIEEERRRAWEVRI
RATKEKMVAVRCISELSDFTHATPPIDPELQRQIDRLLEM* back to top
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