prot_Ecto-sp13_S_contig10203.227.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10203.227.1
Unique Nameprot_Ecto-sp13_S_contig10203.227.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length95
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10203.227.1 vs. uniprot
Match: A0A6H5L9F0_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9F0_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 2.360e-62
Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 0 
Query:    1 MNMTHGLRCQSSNSTSIVLEWHERAPRYLVECKRASEEWGGRGCRAEHTGCGAPSILVVSQLQPSTDYVFRLHSANTEGQFGDPGPEVIFSTKG 94
            MNMT+GLRCQSSNSTSIVLEWHERAPRYLVE KRASEEWGGRGCRAEHTGCGAPSILVVSQLQPSTDYVFRLHSAN E QFGDPGPEV+FSTKG
Sbjct:    1 MNMTYGLRCQSSNSTSIVLEWHERAPRYLVEYKRASEEWGGRGCRAEHTGCGAPSILVVSQLQPSTDYVFRLHSANAECQFGDPGPEVVFSTKG 94
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10203.227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L9F0_9PHAE2.360e-6294.68Fibronectin type-III domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2..95
e-value: 1.4E-8
score: 36.9
IPR003961Fibronectin type IIIPFAMPF00041fn3coord: 6..82
e-value: 8.1E-7
score: 29.3
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 3..95
score: 13.065
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 6..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10203contigEcto-sp13_S_contig10203:3335..4261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10203.227.1mRNA_Ecto-sp13_S_contig10203.227.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10203 3335..4261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10203.227.1 ID=prot_Ecto-sp13_S_contig10203.227.1|Name=mRNA_Ecto-sp13_S_contig10203.227.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp
MNMTHGLRCQSSNSTSIVLEWHERAPRYLVECKRASEEWGGRGCRAEHTG
CGAPSILVVSQLQPSTDYVFRLHSANTEGQFGDPGPEVIFSTKGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf