mRNA_Ecto-sp13_S_contig10203.227.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10203.227.1 vs. uniprot
Match: A0A6H5L9F0_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9F0_9PHAE) HSP 1 Score: 193 bits (490), Expect = 2.360e-62 Identity = 89/94 (94.68%), Postives = 91/94 (96.81%), Query Frame = 1 Query: 1 MNMTHGLRCQSSNSTSIVLEWHERAPRYLVECKRASEEWGGRGCRAEHTGCGAPSILVVSQLQPSTDYVFRLHSANTEGQFGDPGPEVIFSTKG 282
MNMT+GLRCQSSNSTSIVLEWHERAPRYLVE KRASEEWGGRGCRAEHTGCGAPSILVVSQLQPSTDYVFRLHSAN E QFGDPGPEV+FSTKG
Sbjct: 1 MNMTYGLRCQSSNSTSIVLEWHERAPRYLVEYKRASEEWGGRGCRAEHTGCGAPSILVVSQLQPSTDYVFRLHSANAECQFGDPGPEVVFSTKG 94 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10203.227.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10203.227.1 >prot_Ecto-sp13_S_contig10203.227.1 ID=prot_Ecto-sp13_S_contig10203.227.1|Name=mRNA_Ecto-sp13_S_contig10203.227.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp MNMTHGLRCQSSNSTSIVLEWHERAPRYLVECKRASEEWGGRGCRAEHTGback to top mRNA from alignment at Ecto-sp13_S_contig10203:3335..4261+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10203.227.1 ID=mRNA_Ecto-sp13_S_contig10203.227.1|Name=mRNA_Ecto-sp13_S_contig10203.227.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=927bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10203:3335..4261+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10203:3335..4261+ >mRNA_Ecto-sp13_S_contig10203.227.1 ID=mRNA_Ecto-sp13_S_contig10203.227.1|Name=mRNA_Ecto-sp13_S_contig10203.227.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=285bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10203:3335..4261+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |