prot_Ecto-sp13_S_contig10182.207.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig10182.207.1
Unique Name	prot_Ecto-sp13_S_contig10182.207.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	451

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10182.207.1 vs. uniprot
Match: A0A6H5L5T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5T2_9PHAE)

HSP 1 Score: 602 bits (1552), Expect = 1.330e-209
Identity = 353/450 (78.44%), Postives = 369/450 (82.00%), Query Frame = 0

Query:    1 SSREATRRLLGGDGGGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNVADNHAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYNRIGVTRLLLDASASSLEVRDSYHGITPLAWASKFSFTTMLRILLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXHPDSADNEGADAGSVIGCGDPPRHAGHQSPPILPGAVNQSGWLKNETLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPGTTCSVSKTFVSGDKSHSRMTIPRILGTTGLDADTGRRVYFATHQEGTRQGIVRISSDVPHGNEVDTSNDVPGPWSHGNFSNGVPLSSKGSHNTSTILTSLTSESSPTQLGWAGGGSAGHIGRVTGCKPGQGVVQALLRLAAVEIGVFRGVMRFM 450
            SSREATRRLLGGD GGKLVYDYVNMVSQDVATV GL QGGAFLDWQD+HRRR+PLHRAVYFGHFQILKILLAAGANPNVADNHAVT                                       VYNRIGVTRLLLDASASSLEVRDS+HGITPLAWASKFSF TMLRILLS GADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXX  DS DNEGADAGS IG GDPPRH G QSPPILPGAVN++GWLKNETLATRIQLALS ARKDRTWRRRGWLVVLARRQAMAMAVVPGTT   SKT VSG+KS S+MTIPRIL TTG+DADTGRRV+ A+HQEGTRQGIVR SSD+PH      SNDVPG WSHGN  N VPL SKGSHNT+ I TS  SESS  QLGWAGGGSAGHI +VTG  PGQGVVQALL LAAVE+GVFRGVMR++
Sbjct:  204 SSREATRRLLGGDRGGKLVYDYVNMVSQDVATVCGLAQGGAFLDWQDNHRRRSPLHRAVYFGHFQILKILLAAGANPNVADNHAVTPLHIYDTHARTDDSYTPLHLAV-----------------VYNRIGVTRLLLDASASSLEVRDSFHGITPLAWASKFSFATMLRILLSMGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNEGADAGSAIGLGDPPRHKGPQSPPILPGAVNRTGWLKNETLATRIQLALSNARKDRTWRRRGWLVVLARRQAMAMAVVPGTTSRASKTSVSGNKSDSKMTIPRILATTGVDADTGRRVHLASHQEGTRQGIVRSSSDLPH------SNDVPGGWSHGNLGNSVPLQSKGSHNTA-IFTSQISESSSMQLGWAGGGSAGHIDKVTGWTPGQGVVQALLGLAAVEVGVFRGVMRYI 629

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10182.207.1 vs. uniprot
Match: D7G7M3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M3_ECTSI)

HSP 1 Score: 476 bits (1226), Expect = 3.940e-161
Identity = 328/370 (88.65%), Postives = 335/370 (90.54%), Query Frame = 0

Query:    1 SSREATRRLLGGDGGGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNVADNHAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYNRIGVTRLLLDASASSLEVRDSYHGITPLAWASKFSFTTMLRILLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXHPDSADNEGADAGSVIGCGDPPRHAGHQSPPILPGAVNQSGWLKNETLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPGTTCSVSKT---FVSGDK-SHSRMTIPRILGTTGLDADTGRRVYFATHQEGTRQGIVRISSDVPHGNEVDTSNDV 366
            SSREATRRLLGGD GGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNVADN AVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX YNRIGVTRLLLDASASSLEVRDSYHGITPLAWASK SFT MLR+LLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXX  DSADNEGADAGS IG GDPPRHAG QSPPIL GAVN+ G L NE LATRI+LALS+ARKDRTWRRRGWLVVLARRQAMAMAVVPGTT   SK    FV G+K S SRMT PRIL TTG+DADTGRRVY A HQEGTRQG    SSD+PHGNEVD SND 
Sbjct:  213 SSREATRRLLGGDRGGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNVADNLAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNRIGVTRLLLDASASSLEVRDSYHGITPLAWASKLSFTLMLRVLLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXDSADNEGADAGSAIGLGDPPRHAGPQSPPILLGAVNEIGRLNNEELATRIRLALSKARKDRTWRRRGWLVVLARRQAMAMAVVPGTTSRASKAYYAFVRGNKKSESRMTTPRILATTGVDADTGRRVYLAIHQEGTRQGNGSSSSDLPHGNEVDKSNDA 582

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10182.207.1 vs. uniprot
Match: A0A6H5L664_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L664_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 1.360e-146
Identity = 313/455 (68.79%), Postives = 335/455 (73.63%), Query Frame = 0

Query:    1 SSREATRRLLGGDGGGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNVADNHAVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYNRIGVTRLLLDASASSLEVRDSYHGITPLAWASKFSFTTMLRILLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXHPDSADNEGADAGSVIGCGDPPRHAGHQSPPILPGAVNQSGWLKNETLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPGTTCSVSKTFVSGDKSHSRMTIPRILGTTGLDADTGRRVYFATHQEGTRQGIVRISSDVPHGNEVDTSNDVPGPWSHGNFSNGVPLSSKGSHN-----TSTILTSLTSESSPTQLGWAGGGSAGHIGRVTGCKPGQGVVQALLRLAAVEIGVFRGVMRFM 450
            SSREATRRLLGGD GGKLVYDYVNMVSQDVATV GL QGGAFLDWQD+HRRR+PLHRAVYFGHFQILKILLAAGANPNVADNHAVT                XXXXXXXXXXXXXXXXXXXXXXX   RIGVTRLLLDASASSLEVRDS+HGITPLAWASK SFTTMLRILLS GADVNSRSP XXXXXXXXXXXXXXXXXXXXXXXXX  DS DNEGADAGSV G GDPP H G QSPPILPGA NQ+G  KN  LATRIQLALS+ARKDRTWRRRGWLVVLARRQAM MAVVPGTT   SKT+V G++ H RMTIPRI   TG+D            Q+ TR      S+D   G   +T      P  H   ++ V      S +     T T  TSL S  S  QLG  GG   G++G  TG  P +G ++ LL LAA+E GVFR VMRF+
Sbjct:  211 SSREATRRLLGGDRGGKLVYDYVNMVSQDVATVCGLAQGGAFLDWQDNHRRRSPLHRAVYFGHFQILKILLAAGANPNVADNHAVTPLHMVAVKGCEAEAAEXXXXXXXXXXXXXXXXXXXXXXXXXXRIGVTRLLLDASASSLEVRDSFHGITPLAWASKLSFTTMLRILLSMGADVNSRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLDNEGADAGSVTGLGDPPGHTGPQSPPILPGAANQTGRPKNGALATRIQLALSKARKDRTWRRRGWLVVLARRQAMTMAVVPGTTSRASKTYVRGNQGHPRMTIPRIPVMTGVDGKMVVEDLTGADQKRTRVANETFSAD---GGGAETCR-KENPDLHCKQTSIVRGEGASSFHRFFDGTGTNFTSLLSAPSSAQLGSTGGDITGYVGSGTGWAPERGAIETLLWLAAMEEGVFRNVMRFV 661

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10182.207.1 vs. uniprot
Match: D7G7L8_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L8_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.690e-46
Identity = 95/154 (61.69%), Postives = 106/154 (68.83%), Query Frame = 0

Query:  167 MLRILLSTGADVNSRSPAXXXXXXXXXXXXXXXXXXXXXXXXXHPDSADNEGADAGSVIGCGDPPRHAGHQSPPILPGAVNQSGWLKNETLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPGTTCSVSKTFVSGDKSHSRMTIPRI 320
            MLR+LL+ GADVNSRS A                          PD  DN+GADAGSV G GDPPRH G QSPPILPGAVN++G LKNE LATRI+LALS+ARKDRTWRRRGWLVVLA RQAMAM +VP TT   SKT   G +  SRMT+PR+
Sbjct:    1 MLRVLLNAGADVNSRSSAGSTPLYWACRLNTADIVECLLLAGADPDYLDNQGADAGSVTGLGDPPRHTGRQSPPILPGAVNETGRLKNEALATRIRLALSKARKDRTWRRRGWLVVLATRQAMAMNMVPNTT-RASKTHARGIRRVSRMTMPRV 153

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10182.207.1 vs. uniprot
Match: D7G7L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L7_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 8.290e-41
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 0

Query:    1 SSREATRRLLGGDGGGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHRRRTPLHRAVYFGHFQILKILLAAGANPNVADNHAVT 86
            SSREATRRLLGGD GGKLVYDYVNMVSQ+VATVYGLV+GGAFLDWQDSHRRR+PLHRAV FGH QIL+ILL  GANPNVADN AVT
Sbjct:   75 SSREATRRLLGGDRGGKLVYDYVNMVSQNVATVYGLVKGGAFLDWQDSHRRRSPLHRAVNFGHSQILQILLTTGANPNVADNLAVT 160

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig10182.207.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig10182.207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A6H5L5T2_9PHAE	1.330e-209	78.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7M3_ECTSI	3.940e-161	88.65	Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si...	[more]
A0A6H5L664_9PHAE	1.360e-146	68.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G7L8_ECTSI	1.690e-46	61.69	Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si...	[more]
D7G7L7_ECTSI	8.290e-41	88.37	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PRINTS	PR01415	ANKYRIN	coord: 167..181 score: 38.28 coord: 51..66 score: 37.09
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 83..112 e-value: 440.0 score: 7.6 coord: 184..213 e-value: 1.2E-4 score: 31.5 coord: 116..146 e-value: 0.0072 score: 25.5 coord: 50..79 e-value: 2.3E-5 score: 33.8 coord: 151..180 e-value: 0.024 score: 23.8
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 184..216 score: 12.155
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 50..82 score: 13.811
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 116..142 score: 9.564
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 151..183 score: 10.953
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 55..144 e-value: 1.8E-12 score: 47.6
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 36..216 score: 49.074
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 182..221 e-value: 1.5E-9 score: 39.7
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 23..181 e-value: 2.8E-38 score: 133.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 28..219
None	No IPR available	PFAM	PF13637	Ank_4	coord: 154..205 e-value: 1.2E-8 score: 35.3
None	No IPR available	PANTHER	PTHR24189:SF50		coord: 39..95
None	No IPR available	PANTHER	PTHR24189:SF50		coord: 151..219
None	No IPR available	PANTHER	PTHR24189	FAMILY NOT NAMED	coord: 51..142 coord: 39..95
None	No IPR available	PANTHER	PTHR24189:SF50		coord: 51..142
None	No IPR available	PANTHER	PTHR24189	FAMILY NOT NAMED	coord: 151..219

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig10182	contig	Ecto-sp13_S_contig10182:3..1355 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig10182.207.1	mRNA_Ecto-sp13_S_contig10182.207.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig10182 3..1355 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig10182.207.1 ID=prot_Ecto-sp13_S_contig10182.207.1|Name=mRNA_Ecto-sp13_S_contig10182.207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=451bp
SSREATRRLLGGDGGGKLVYDYVNMVSQDVATVYGLVQGGAFLDWQDSHR
RRTPLHRAVYFGHFQILKILLAAGANPNVADNHAVTPLHMVAVKGCEAEA
AELLCAGADTHARTNDSYTPLHLAVVYNRIGVTRLLLDASASSLEVRDSY
HGITPLAWASKFSFTTMLRILLSTGADVNSRSPAGLTPLHWACRFNNADI
VDCLLLAGAHPDSADNEGADAGSVIGCGDPPRHAGHQSPPILPGAVNQSG
WLKNETLATRIQLALSRARKDRTWRRRGWLVVLARRQAMAMAVVPGTTCS
VSKTFVSGDKSHSRMTIPRILGTTGLDADTGRRVYFATHQEGTRQGIVRI
SSDVPHGNEVDTSNDVPGPWSHGNFSNGVPLSSKGSHNTSTILTSLTSES
SPTQLGWAGGGSAGHIGRVTGCKPGQGVVQALLRLAAVEIGVFRGVMRFM
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf