Homology
BLAST of mRNA_Ecto-sp13_S_contig10171.201.1 vs. uniprot
Match: A0A6H5K584_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K584_9PHAE) HSP 1 Score: 536 bits (1380), Expect = 1.200e-188 Identity = 283/306 (92.48%), Postives = 291/306 (95.10%), Query Frame = 0 Query: 153 MAHRGTLSPRWQGATSSSSVRSRGADVPDEEKEILADPERSGPVHAIRARAPSSYGYIFLATLEGVLSASSFRSACAVSVPIISTFPLNNPAEEALISASASAFAVAGAVRSGAALALGTPFFLLAARCAIFALNRVRIPAVQRLQLQQPRLGFPLPAGVDEKVAVDLYVIGLAAAVLGGCVPALEMAGIFLGDSLKGRPPVWVVLAFLVLIPVIYLALGAWLDLSSPGEGFIARTRPTTAMCGLCAAGHVILLAGCFYSPDVSRTLGFLLGLVHIVRTLLPAFAYPAGSGAAACEEDDMGASAHL 458
MAHRGTLSPRWQGATS+SS RSRGADVPDEEKEILADPERSGPVHAIRARAPSSY YIFLATLEGVLSASSFRSA AVSVPIIS FPL+NPAEEALISASASAFAVA AVRSGAALALGTPFFLLAARCAI AL+RVRIPAVQRLQLQQPRLGFPLP GVDE VAVDLY+IGLAAAVLGGCVPALEMAGI LG SLKGR PVWVV AF+VLIPV+YLALGAWL+LSSPGEGF+ARTRPTTAM GL AAGHVILLAGCFYSPDVSRTLGFLLGLVHIVRTLLPAFAYPAGSGAAA EEDDMGASAHL
Sbjct: 1 MAHRGTLSPRWQGATSTSSARSRGADVPDEEKEILADPERSGPVHAIRARAPSSYRYIFLATLEGVLSASSFRSARAVSVPIISAFPLHNPAEEALISASASAFAVAAAVRSGAALALGTPFFLLAARCAILALSRVRIPAVQRLQLQQPRLGFPLPTGVDENVAVDLYIIGLAAAVLGGCVPALEMAGILLGVSLKGRSPVWVVSAFVVLIPVVYLALGAWLNLSSPGEGFVARTRPTTAMWGLSAAGHVILLAGCFYSPDVSRTLGFLLGLVHIVRTLLPAFAYPAGSGAAASEEDDMGASAHL 306
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10171.201.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5K584_9PHAE | 1.200e-188 | 92.48 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 320..342 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 1..319 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 412..417 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 372..390 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 354..371 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 391..411 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 418..438 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 439..458 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 343..353 |
| None | No IPR available | TMHMM | TMhelix | | coord: 419..441 |
| None | No IPR available | TMHMM | TMhelix | | coord: 322..344 |
| None | No IPR available | TMHMM | TMhelix | | coord: 353..375 |
| None | No IPR available | TMHMM | TMhelix | | coord: 390..412 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig10171.201.1 ID=prot_Ecto-sp13_S_contig10171.201.1|Name=mRNA_Ecto-sp13_S_contig10171.201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=459bp
MCMSVFYAAAAIAGKTNSSFKYSDLAIHLSRGSCACVTEEGLRVWYGQQV
LGVEWRNSRRRTFICAFVARKSLQIFAPDRAIVVKSESEKSCQKRLQTST
CLATSYAPIKRGRTRTDDRVSGSERDGSGSVWTSTVRQGKSSLAARREEV
KEMAHRGTLSPRWQGATSSSSVRSRGADVPDEEKEILADPERSGPVHAIR
ARAPSSYGYIFLATLEGVLSASSFRSACAVSVPIISTFPLNNPAEEALIS
ASASAFAVAGAVRSGAALALGTPFFLLAARCAIFALNRVRIPAVQRLQLQ
QPRLGFPLPAGVDEKVAVDLYVIGLAAAVLGGCVPALEMAGIFLGDSLKG
RPPVWVVLAFLVLIPVIYLALGAWLDLSSPGEGFIARTRPTTAMCGLCAA
GHVILLAGCFYSPDVSRTLGFLLGLVHIVRTLLPAFAYPAGSGAAACEED
DMGASAHL* back to top
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