prot_Ecto-sp13_S_contig10052.76.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10052.76.1 vs. uniprot
Match: D7FXW0_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW0_ECTSI) HSP 1 Score: 518 bits (1333), Expect = 1.050e-174 Identity = 301/315 (95.56%), Postives = 308/315 (97.78%), Query Frame = 0 Query: 1 GVAADNACLGHVATACARAQMFETALAMVRGMVSKGHSVTRTYNNIMLAIVNGQAFTSRTSS-RSNFRRSALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALTRSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPKKNAMMRAVLEDAKLELQGLDLSAVYSAVVSGYAMDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRPHKAWNNNRETSSFMRPTSTRENIGRGLSPVQAEASDAGDFALGLMEEMKREGVEPDIITYG 314 GVAADNACLGHVATACAR QM +TALAMVRGMVSKGHSV RTYNNIMLAIVNGQAFTSRTSS RS+FRR+ALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAAL RSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPKKNAMMRAVLEDAKLEL+GLDLSAVYSAVVSGYA+DGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRP+KAWNNNRETSSF+RPTSTREN GRGLSP QAEASDAGDFALGLMEEMKREGVEPDIITYG Sbjct: 65 GVAADNACLGHVATACARGQMLDTALAMVRGMVSKGHSVARTYNNIMLAIVNGQAFTSRTSSSRSSFRRTALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALARSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPKKNAMMRAVLEDAKLELEGLDLSAVYSAVVSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRPNKAWNNNRETSSFLRPTSTRENKGRGLSPAQAEASDAGDFALGLMEEMKREGVEPDIITYG 379
BLAST of mRNA_Ecto-sp13_S_contig10052.76.1 vs. uniprot
Match: A0A6H5KVR3_9PHAE (PPR_long domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR3_9PHAE) HSP 1 Score: 493 bits (1268), Expect = 2.250e-164 Identity = 290/314 (92.36%), Postives = 297/314 (94.59%), Query Frame = 0 Query: 1 GVAADNACLGHVATACARAQMFETALAMVRGMVSKGHSVTRTYNNIMLAIVNGQAFTSRTSSRSNFRRSALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALTRSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPKKNAMMRAVLEDAKLELQGLDLSAVYSAVVSGYAMDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRPHKAWNNNRETSSFMRPTSTRENIGRGLSPVQAEASDAGDFALGLMEEMKREGVEPDIITYG 314 GVAADNACLGHVATACAR QM +TALAMVRGMVSKGHSV RTYNNIMLAIVNGQAFTSRTSSRSNFRR+ALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALTRSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGP KN +MRAVLEDAKLELQG+DLSAVYSAVVSGYA+DGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRP+KAWNNNRETSSFMRPTST AEASDAGDFALGLM+EMKREGVEPDIITYG Sbjct: 147 GVAADNACLGHVATACARGQMLDTALAMVRGMVSKGHSVARTYNNIMLAIVNGQAFTSRTSSRSNFRRTALSNMECEAAVGLLGEMQACGAHPTVFTYNLLIAALTRSRRPHSEVLNLLDQMRCDGIKPDSYTYVGVVKGIQGPNKNVIMRAVLEDAKLELQGVDLSAVYSAVVSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFFGRPNKAWNNNRETSSFMRPTST------------AEASDAGDFALGLMDEMKREGVEPDIITYG 448 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10052.76.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig10052.76.1 ID=prot_Ecto-sp13_S_contig10052.76.1|Name=mRNA_Ecto-sp13_S_contig10052.76.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=315bpback to top |