Homology
BLAST of mRNA_Ecto-sp13_S_contig10041.64.1 vs. uniprot
Match:
D7FRV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV2_ECTSI)
HSP 1 Score: 661 bits (1705), Expect = 2.250e-234
Identity = 344/382 (90.05%), Postives = 354/382 (92.67%), Query Frame = 0
Query: 188 DETGTSNFQTVSNDTLFSVSCGGCSTVTPAPTAATTAAPTIFVGGEDCGALTVSAPSAPYLEGCYFDTRLTQSWYSEFVEVELPSFTQDGSLAAGQLWISWLSYATNETFWGLFFYPTFTSSSEQLVSVYCLSQEEVTEAYPGNTTWDCDLDGDYSTTFGIEKTKFSVTCGCATGSAQGGTLSESPXXXXXXXXXXXXXXXGCMAGDPFLVTLPAVPQVEGCYVDSNLNDTAGYPIYRSTGGAESADGQSFVLPTGDGPVEETYYKDWTLVLFEFGTEEPRVICSRGMDGSDGINGHPAHEVASAYDDTPGVIFWHCDLEGTGNVSYINASSSIFRIECGCASSLDFNRAMGRENANQRSLRTTLVLFS-LSMAMGVVLGAL 568
DETGTSNFQTVSNDTLFSVSCGGCS+ TPAPTAATTAAPTIF+GGEDCGALTVSAPSAP++EGCYFDTRLTQSWYSEFVE+ELPSFTQDGSLAAGQLW+SWL+YATNETFWGLFFYPTFTSSSEQLVSVYCLSQEEVTEA P NTTWDCDLDGDYSTTFGIE+TKFSVTCGCATG XXXXXXXXXXXXXXX C+AGDPFLVTLPAVPQVEGCYVDSNLNDTAGY IYRSTGGAESADGQSFVLPTGDGPVEETYYKDWTLVLFEFG EEPRVICSRGMD SDG NGHPAH VASAYDDTPGVIFWHCDLEGTGNVSY+NASSSI RIECGC SSLDFN A GR NANQRSL TTLVL S LSMAMGVVLGAL
Sbjct: 44 DETGTSNFQTVSNDTLFSVSCGGCSSATPAPTAATTAAPTIFIGGEDCGALTVSAPSAPHVEGCYFDTRLTQSWYSEFVEIELPSFTQDGSLAAGQLWLSWLTYATNETFWGLFFYPTFTSSSEQLVSVYCLSQEEVTEATPANTTWDCDLDGDYSTTFGIEETKFSVTCGCATGGXXXXXXXXXXXXXXXXXXXXXXXXXXCVAGDPFLVTLPAVPQVEGCYVDSNLNDTAGYAIYRSTGGAESADGQSFVLPTGDGPVEETYYKDWTLVLFEFGIEEPRVICSRGMDSSDGTNGHPAHGVASAYDDTPGVIFWHCDLEGTGNVSYMNASSSILRIECGCPSSLDFNGATGRANANQRSLGTTLVLLSSLSMAMGVVLGAL 425
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10041.64.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M V H L V F V S H V T S F S I V W S S H V C F A C F T P S S L R R Q A H P A S H P V S F Q V Y Q T P S N L D S A R R G I L D G A R T H I K N N F V N R G S T G R G L E D A R A L Q D A C P S G S P L F V S S S M F P S A E G C Y V A S D T L L S G G E P V Y F I T S A T S P G Q T I L A A P K D P D D D D E G P L F W G V A Y V T S S T A V L Q C A S V E D A S L V N P A D A A W M C D E T G T S N F Q T V S N D T L F S V S C G G C S T V T P A P T A A T T A A P T I F V G G E D C G A L T V S A P S A P Y L E G C Y F D T R L T Q S W Y S E F V E V E L P S F T Q D G S L A A G Q L W I S W L S Y A T N E T F W G L F F Y P T F T S S S E Q L V S V Y C L S Q E E V T E A Y P G N T T W D C D L D G D Y S T T F G I E K T K F S V T C G C A T G S A Q G G T L S E S P T P A P T P G P T P S P T V S G C M A G D P F L V T L P A V P Q V E G C Y V D S N L N D T A G Y P I Y R S T G G A E S A D G Q S F V L P T G D G P V E E T Y Y K D W T L V L F E F G T E E P R V I C S R G M D G S D G I N G H P A H E V A S A Y D D T P G V I F W H C D L E G T G N V S Y I N A S S S I F R I E C G C A S S L D F N R A M G R E N A N Q R S L R T T L V L F S L S M A M G V V L G A L * 50 100 150 200 250 300 350 400 450 500 550 Expect = 2.25e-234 / Id = 90.05 Sequence D7FRV2_ECTSI
Match Name E-value Identity Description
D7FRV2_ECTSI 2.250e-234 90.05 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M V H L V F V S H V T S F S I V W S S H V C F A C F T P S S L R R Q A H P A S H P V S F Q V Y Q T P S N L D S A R R G I L D G A R T H I K N N F V N R G S T G R G L E D A R A L Q D A C P S G S P L F V S S S M F P S A E G C Y V A S D T L L S G G E P V Y F I T S A T S P G Q T I L A A P K D P D D D D E G P L F W G V A Y V T S S T A V L Q C A S V E D A S L V N P A D A A W M C D E T G T S N F Q T V S N D T L F S V S C G G C S T V T P A P T A A T T A A P T I F V G G E D C G A L T V S A P S A P Y L E G C Y F D T R L T Q S W Y S E F V E V E L P S F T Q D G S L A A G Q L W I S W L S Y A T N E T F W G L F F Y P T F T S S S E Q L V S V Y C L S Q E E V T E A Y P G N T T W D C D L D G D Y S T T F G I E K T K F S V T C G C A T G S A Q G G T L S E S P T P A P T P G P T P S P T V S G C M A G D P F L V T L P A V P Q V E G C Y V D S N L N D T A G Y P I Y R S T G G A E S A D G Q S F V L P T G D G P V E E T Y Y K D W T L V L F E F G T E E P R V I C S R G M D G S D G I N G H P A H E V A S A Y D D T P G V I F W H C D L E G T G N V S Y I N A S S S I F R I E C G C A S S L D F N R A M G R E N A N Q R S L R T T L V L F S L S M A M G V V L G A L * 50 100 150 200 250 300 350 400 450 500 550 Score = Score = Score = Score = Score = Score = Score = Score = 0.546 Sequence CYTOPLASMIC_DOMAIN TRANSMEMBRANE SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 568..568 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 548..567 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..24 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 17..24 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 25..547 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 4..16 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..3 None No IPR available SIGNALP_EUK SignalP-noTM SignalP-noTM coord: 1..18
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig10041.64.1 ID=prot_Ecto-sp13_S_contig10041.64.1|Name=mRNA_Ecto-sp13_S_contig10041.64.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=569bp back to top