Homology
BLAST of mRNA_Ecto-sp13_S_contig100282.48.1 vs. uniprot
Match: D7G7C0_ECTSI (Conserved oligomeric Golgi complex subunit 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C0_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 3.150e-15 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0 Query: 3 SGDILSLWLLRRVSAFVEQLKGLLPLVEDGGLLRSLLEE 41
SGDILSLWLLRRVSAFVEQLKGLLPLVEDGGLLRSLLEE
Sbjct: 376 SGDILSLWLLRRVSAFVEQLKGLLPLVEDGGLLRSLLEE 414
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig100282.48.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| D7G7C0_ECTSI | 3.150e-15 | 100.00 | Conserved oligomeric Golgi complex subunit 8 n=2 T... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 62..64 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..41 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 42..61 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig100282.48.1 ID=prot_Ecto-sp13_S_contig100282.48.1|Name=mRNA_Ecto-sp13_S_contig100282.48.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=64bp
ESSGDILSLWLLRRVSAFVEQLKGLLPLVEDGGLLRSLLEEVCVCSICCC
LVLPQLLWLLFQLL back to top
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