Homology
BLAST of mRNA_Ecto-sp13_S_contig10.15.1 vs. uniprot
Match:
D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)
HSP 1 Score: 82.4 bits (202), Expect = 8.550e-17
Identity = 40/53 (75.47%), Postives = 41/53 (77.36%), Query Frame = 0
Query: 1 MPDVASVEYFTSINVPGTPPHKFNLKVGALIFFMSNIYFDRGFVNDKRGVFRG 53
MPDVASVEY IN PGTPPHK NLK GALIFF+ NI FD G VN KRGV RG
Sbjct: 598 MPDVASVEYLNIINAPGTPPHKLNLKGGALIFFIRNIDFDCGLVNGKRGVIRG 650
BLAST of mRNA_Ecto-sp13_S_contig10.15.1 vs. uniprot
Match:
D7G7Y0_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Y0_ECTSI)
HSP 1 Score: 75.5 bits (184), Expect = 9.160e-17
Identity = 37/55 (67.27%), Postives = 42/55 (76.36%), Query Frame = 0
Query: 1 MPDVASVEYFTSINVPGTPPHKFNLKVGALIFFMSNIYFDRGFVND--KRGVFRG 53
MPD+ S+EY SINVPGTPPHKFNLK GALIFF+ NI FD G VN +RG+ G
Sbjct: 1 MPDIVSLEYLNSINVPGTPPHKFNLKFGALIFFIRNINFDCGPVNGNGERGLIEG 55
BLAST of mRNA_Ecto-sp13_S_contig10.15.1 vs. uniprot
Match:
A0A2G3AQN0_CAPCH (ATP-dependent DNA helicase n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3AQN0_CAPCH)
HSP 1 Score: 50.1 bits (118), Expect = 2.120e-5
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 0
Query: 7 VEYFTSINVPGTPPHKFNLKVGALIFFMSNIYFDRGFVNDKRGVFRGKLQGAL 59
+E+ SI G PPHK NLK+GA++ + N+ G VN R + RG Q +L
Sbjct: 569 LEFLNSITPSGLPPHKLNLKIGAIVMLIRNMNLGGGLVNGVRFIIRGMKQNSL 621
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10.15.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
M P D V A S V E Y F T S I N V P G T P P H K F N L K V G A L I F F M S N I Y F D R G F V N D K R G V F R G K L Q G A L L T L K I L R * 5 10 15 20 25 30 35 40 45 50 55 60 65 Expect = 8.55e-17 / Id = 75.47 Expect = 9.16e-17 / Id = 67.27 Expect = 2.12e-5 / Id = 41.51 Sequence D8LCL4_ECTSI D7G7Y0_ECTSI A0A2G3AQN0_CAPCH
Match Name E-value Identity Description
D8LCL4_ECTSI 8.550e-17 75.47 ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more] D7G7Y0_ECTSI 9.160e-17 67.27 ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more] A0A2G3AQN0_CAPCH 2.120e-5 41.51 ATP-dependent DNA helicase n=1 Tax=Capsicum chinen... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M P D V A S V E Y F T S I N V P G T P P H K F N L K V G A L I F F M S N I Y F D R G F V N D K R G V F R G K L Q G A L L T L K I L R * 5 10 15 20 25 30 35 40 45 50 55 60 65 Score = Score = Score = Sequence TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 23..39 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 40..66 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 1..22
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig10.15.1 ID=prot_Ecto-sp13_S_contig10.15.1|Name=mRNA_Ecto-sp13_S_contig10.15.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp back to top