|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig926.20847.1 vs. uniprot
Match: D8LGM1_ECTSI (F-box domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM1_ECTSI) HSP 1 Score: 877 bits (2267), Expect = 9.700e-310 Identity = 719/839 (85.70%), Postives = 727/839 (86.65%), Query Frame = 1
Query: 1 MSSRPRLVGGAALEEVEDDEEDNAYGQGGGQGAGRSVLEEMPPGEACFE--------------------------------------AFNVSEDVTAAILGDLDARDLARAAATSRGWRRCTSSRVLWAAVYARDFLGHVPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDPRHDIFRAVWPQLPSSLSSRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-SLSDGQSFFFGDGGVXXXXXXXXXXXXXXXXXVTLLGVEDNPKEQYAKQLTERKARLERQQRQEILREARKRADRRRRGYERGLDCLHVRVLPPVLGMSLALTLVFLAAWIDGDVQANVGLLESACSDVDLLRRGCGGGGDGCAGVEGARRPRVVRAVHLFWITHANWFAVFTPLFFCFLILCLSPCLQWASWGDGGVYLLGMLLGWIPAVLCLVLVCSRLQGDNVSMNVIMSPLWAVDLVLILTPVAMAIAVAVRRMQRGEPVEAMLVHTLAASWCLLTPVLAPVVAFEIALAVYVEGERDTLTAAEVFTPLIVWCCVLSLILCGYACSYPPRHPDPQDGXXXXXXXXXXXXXXXXXS-------------FAPTPLRGFATRLPRPTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---PSTMSPLPGSLPHXXXXXXXXXXXXXXXXXXXXXXSLPRQLTPGPHASXXXXXXXXXXXXXGADMPPDMADIVALRSQLAELGVMAGFLDPSSPTVAAATGSIDARGIRSRNWVG 2352
MSSRPRLVGGAAL+EVEDDEEDN YGQGGGQGAGRSVLEEMPPGEACFE AFNVSEDVTAAILGDLDARDLARAAATSRGWRRCTSSRVLWAAVYARDFLGHVP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AVDPRHDIFRAVWPQLPSSLSSRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX SL DG+SFF XXXXXXXXXXXXXXXXXVTLLGVEDNPKEQYAKQLTERKARLE+QQR+EI REA++RADRRRRGYERGLDCLHVRVLPPVLGMSLALTLVFLAAWIDGDVQANVGLLESACSDVDLLRRGCGGG DG AGVEGARRP VVRA++LF ITHANWFAVFTPLFFCFLILCLSPCLQWASWGDGGVYLLGMLLGWIPAVLCLVLVCSRLQGDNVSMNVIMSPLWAVDLVLIL PVAMAIAVAVRRMQRGEPVEAMLVHTLAASWCLLTPVLAPVVAFEIALAVYVEGERDTLTAAEVFTPLIVWCCVLSLILCGYACSYPPRHPDPQDG XXXXXXXXXXXXXXXX FAPTPLRGFATRLPRPTA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PSTMSPLPGSLPHXXXXXX XXXXXXXXX SLPRQLTPGPHAS GADMPPDMADIVALRSQLAELGVMAGFLDP SPTVAAATGSID RGIRSRNW G
Sbjct: 1 MSSRPRLVGGAALDEVEDDEEDNVYGQGGGQGAGRSVLEEMPPGEACFEVKFWGGGQRFGNLVATMSCGSLVRCFFFHPFGSGGRKKAFNVSEDVTAAILGDLDARDLARAAATSRGWRRCTSSRVLWAAVYARDFLGHVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AVDPRHDIFRAVWPQLPSSLSSRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAMLGYDGSAGXXXXXXXXXXXXSLGDGRSFFX----XXXXXXXXXXXXXXXXXXVTLLGVEDNPKEQYAKQLTERKARLEKQQRKEIQREAQERADRRRRGYERGLDCLHVRVLPPVLGMSLALTLVFLAAWIDGDVQANVGLLESACSDVDLLRRGCGGGRDGGAGVEGARRPWVVRAINLFRITHANWFAVFTPLFFCFLILCLSPCLQWASWGDGGVYLLGMLLGWIPAVLCLVLVCSRLQGDNVSMNVIMSPLWAVDLVLILAPVAMAIAVAVRRMQRGEPVEAMLVHTLAASWCLLTPVLAPVVAFEIALAVYVEGERDTLTAAEVFTPLIVWCCVLSLILCGYACSYPPRHPDPQDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAPTPLRGFATRLPRPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTMSPLPGSLPHXXXXXXPXXXXXXXXXY-----SLPRQLTPGPHASGGNATARG-----GADMPPDMADIVALRSQLAELGVMAGFLDPPSPTVAAATGSIDGRGIRSRNWGG 824
BLAST of mRNA_Ecto-sp13_S_contig926.20847.1 vs. uniprot
Match: A0A6H5L5A3_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5A3_9PHAE) HSP 1 Score: 745 bits (1924), Expect = 5.010e-248 Identity = 659/865 (76.18%), Postives = 668/865 (77.23%), Query Frame = 1
Query: 1 MSSRPRLVGGAALEEVEDDEEDNAYGQGGGQGAGRSVLEEMPPGEACFEAFNVSEDVTAAILGDLDARDLARAAATSRGWRRCTSSRVLWAAVYARDFLGHVPPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDPRHDIFRAVWPQLPSSLSSRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLSDGQSFFFGDGGVXXXXXXXXXXXXXXXXX---VTLLGVEDNPKEQYAKQLTERKARLERQQRQEILREARKRADRRRRGYERGLDCLHVRVLPPVLGMSLALTLVFLAAWIDGD------------VQANVGLLESACSDVDLLRRGCGGGGDGCA--GVEGARRPRVVRAVH--------------LFW------------ITHANWFAVFTPLFFCFLILCLSPCLQWASWGDGGVYLLGMLLGWIPAVLCLVLVCSRLQGDNVSMNVIMSPLWAVDLVLILTPVAMAIAVAVRRMQRGEPVEAMLVHTLAASWCLLTPVLAPVVAFEIALAVYVEGERDTLTAAEVFTPLIVWCCVLSLILCGYACSYPPRHPDPQDGXXXXXXXXXXXXXXXXX--------SFAPTPLRGFATRLPRPTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------PSTMSPLPGSLPHXXXXXXXXXXXXXXXXXXXXXXSLPRQLTPGPHASXXXXXXXXXXXXXGADMPPDMADIVALRSQLAELGVMAGFLDPSSPTVAAATGSIDARGIRSRNWVG 2352
MSSRPRLVGGAALEEVED EEDN YGQGGG+GAGRSVLEE+PPGEACFEAFNVSEDVTAAILGDLDA DLARAAATSRGWRRCTSSRVLWAAVYARDFLGHVP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AVDPRHDIFRAVWPQLPSSLSSRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX T LGVEDNPKEQYAKQLTERKARLERQQR+EILREARKRADRRRRGYERGLD LHVRVLPPVLGMSLALTLVFLAAWIDGD + V A + R G G+ G R + VH LF ITHANWFAVFTPLFFCFLILCLSPCLQWASWGDGGVYLLGMLLGWIPAVLCLVLVCSRLQGDNVSMNVIMSPLWAVDLVLIL PV MAIAVAVRRMQRGEPVEA LVHTLAASWCLLTPVLAPVVAFEIALAVYVEGERDTL+AAEVFTPLIVWCCVLSLILCGYACSYPPRHPDPQDG XXXXXXXXX SFAPTPLR FATRLPR TAS XXXXXXXXXX XXXXXXXXXXXXXXXXXX XXX PSTMSPLPGSLPH XXX SLPR LTPGPHAS XXXXXXXXXXX ADM PDMA+IVALRSQLAELGVMAGFLDPSSPTVAAATGSID RGIRSRNW G
Sbjct: 629 MSSRPRLVGGAALEEVEDVEEDNVYGQGGGRGAGRSVLEEIPPGEACFEAFNVSEDVTAAILGDLDAHDLARAAATSRGWRRCTSSRVLWAAVYARDFLGHVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA------AVDPRHDIFRAVWPQLPSSLSSRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATHLGVEDNPKEQYAKQLTERKARLERQQREEILREARKRADRRRRGYERGLDYLHVRVLPPVLGMSLALTLVFLAAWIDGDTWDYWKVLAPMWISCAVAAAAVATAVWAWRERAAHGSSVRATYYGLRGMVRYFMAEVVHDSVIGIMSGIALLFLFTLELVVLGLRVEGITHANWFAVFTPLFFCFLILCLSPCLQWASWGDGGVYLLGMLLGWIPAVLCLVLVCSRLQGDNVSMNVIMSPLWAVDLVLILAPVGMAIAVAVRRMQRGEPVEATLVHTLAASWCLLTPVLAPVVAFEIALAVYVEGERDTLSAAEVFTPLIVWCCVLSLILCGYACSYPPRHPDPQDGGSGGGGIGXXXXXXXXXXXXDTTPSSFAPTPLRAFATRLPRHTASASVGGLGXXXXXXXXXXEVXXXXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTMSPLPGSLPHHRHPXXXHY-------------SLPRPLTPGPHASGGXXXXXXXXXXX-ADMHPDMAEIVALRSQLAELGVMAGFLDPSSPTVAAATGSIDGRGIRSRNWGG 1473
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 2373 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| Ec32 ortholog description | F-box domain |
| Ec32 ortholog | Ec-10_002720.1 |
| Cds size | 2373 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681464196.8319402-CDS-Ecto-sp13_S_contig926:10553..11226 | 1681464196.8319402-CDS-Ecto-sp13_S_contig926:10553..11226 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 10554..11226 - |
| 1681464196.8431962-CDS-Ecto-sp13_S_contig926:12142..12291 | 1681464196.8431962-CDS-Ecto-sp13_S_contig926:12142..12291 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 12143..12291 - |
| 1681464196.8532953-CDS-Ecto-sp13_S_contig926:12523..12668 | 1681464196.8532953-CDS-Ecto-sp13_S_contig926:12523..12668 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 12524..12668 - |
| 1681464196.8623903-CDS-Ecto-sp13_S_contig926:13389..13563 | 1681464196.8623903-CDS-Ecto-sp13_S_contig926:13389..13563 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 13390..13563 - |
| 1681464196.8716643-CDS-Ecto-sp13_S_contig926:15578..15711 | 1681464196.8716643-CDS-Ecto-sp13_S_contig926:15578..15711 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 15579..15711 - |
| 1681464196.8829286-CDS-Ecto-sp13_S_contig926:16349..16515 | 1681464196.8829286-CDS-Ecto-sp13_S_contig926:16349..16515 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 16350..16515 - |
| 1681464196.894234-CDS-Ecto-sp13_S_contig926:16951..17043 | 1681464196.894234-CDS-Ecto-sp13_S_contig926:16951..17043 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 16952..17043 - |
| 1681464196.904574-CDS-Ecto-sp13_S_contig926:17103..17797 | 1681464196.904574-CDS-Ecto-sp13_S_contig926:17103..17797 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 17104..17797 - |
| 1681464196.9143217-CDS-Ecto-sp13_S_contig926:18235..18382 | 1681464196.9143217-CDS-Ecto-sp13_S_contig926:18235..18382 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig926 18236..18382 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig926.20847.1 >prot_Ecto-sp13_S_contig926.20847.1 ID=prot_Ecto-sp13_S_contig926.20847.1|Name=mRNA_Ecto-sp13_S_contig926.20847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=791bp
MSSRPRLVGGAALEEVEDDEEDNAYGQGGGQGAGRSVLEEMPPGEACFEA
FNVSEDVTAAILGDLDARDLARAAATSRGWRRCTSSRVLWAAVYARDFLG
HVPPLPPPPPPPDLQATLAGGGSGGGGGGGGGAQHQHRHQSRESFMLAAA
AAAAGGGGGGADGAAAAAAAAVDPRHDIFRAVWPQLPSSLSSRSGGGGGR
QHGRGGNSNRRFSSSSHHRGGGGGSGGAVAAMLGYDGSAGGGGGGGGSAS
LSDGQSFFFGDGGVGGLYGGSGGSGGSGGSGVTLLGVEDNPKEQYAKQLT
ERKARLERQQRQEILREARKRADRRRRGYERGLDCLHVRVLPPVLGMSLA
LTLVFLAAWIDGDVQANVGLLESACSDVDLLRRGCGGGGDGCAGVEGARR
PRVVRAVHLFWITHANWFAVFTPLFFCFLILCLSPCLQWASWGDGGVYLL
GMLLGWIPAVLCLVLVCSRLQGDNVSMNVIMSPLWAVDLVLILTPVAMAI
AVAVRRMQRGEPVEAMLVHTLAASWCLLTPVLAPVVAFEIALAVYVEGER
DTLTAAEVFTPLIVWCCVLSLILCGYACSYPPRHPDPQDGGGGGGGGAGD
NDDTTSSSFAPTPLRGFATRLPRPTASASVGGLGSGGRGRSRGGGGGGGY
GAAPGRSRRRQQQQQLPLPPSTMSPLPGSLPHHHHHHHHHHPHHHHPHHH
HHHYSLPRQLTPGPHASGGNGNAAAAAAGGGADMPPDMADIVALRSQLAE
LGVMAGFLDPSSPTVAAATGSIDARGIRSRNWVGGGGGGGG back to topmRNA from alignment at Ecto-sp13_S_contig926:10554..18382- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig926.20847.1 ID=mRNA_Ecto-sp13_S_contig926.20847.1|Name=mRNA_Ecto-sp13_S_contig926.20847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7829bp|location=Sequence derived from alignment at Ecto-sp13_S_contig926:10554..18382- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCATCGAGACCCCGGCTGGTCGGCGGGGCGGCGTTGGAAGAGGTCGA
AGACGACGAAGAAGACAACGCTTACGGCCAGGGAGGCGGCCAGGGGGCGG
GGAGGAGTGTCTTGGAGGAGATGCCTCCCGGCGAGGCTTGTTTTGAGGTG
AATTTTTGGAGCAGAGGTTTGGGAATTCGGTCGCGACGATAAGGCACAGT
CTCGTTTGCTGTTTTTTTTTCATCCTTTTGGAAGCGGGGGGAGGAAGAAG
GTGAGCGTCGTGCCGATTGGTTTCTTGTGTACACCTCTCCGCTCTGCCTA
GAAATTGACGCCCTGCCAACGGCAACAAAAGACCAGGGTTTTCAGCACAT
GGACAGTTCCCAGCCAGCAAGAAAAGGCCACCCGCGTGCCGCCGATGACC
TACGTACTGGCTGTCTTGACCGAGCTGGAAACGCGTATACGAGGGTATGC
GGTGCACTTGTGAGTAGACCCTTCTTTTTCGTTCGCAGGTGTTATCTCCT
GACGCGTTTTTGCTGCTGCCTTTGCTTTTGCTGCCTTTGCTTCTGCTGCC
TCTGCTGCTGCTGTTTCTACGACCATTTTTGACAGGCGTTCAACGTGAGC
GAAGACGTGACCGCGGCGATCCTGGGAGACCTCGACGCCCGCGACCTCGC
CCGCGCCGCGGCGACCAGCCGCGGCTGGCGCCGGTGCACGAGCTCTCGGG
TCCTGTGGGCGGCCGTCTACGCGCGGGATTTCCTCGGCCATGTCCCGCCG
CTGCCGCCGCCGCCGCCGCCGCCGGACCTGCAAGCGACCCTGGCTGGTGG
TGGCAGCGGCGGAGGAGGAGGAGGAGGAGGAGGGGCCCAGCACCAGCATC
GGCATCAGAGTCGCGAGAGCTTCATGCTTGCGGCGGCGGCCGCGGCGGCG
GGAGGCGGGGGCGGCGGGGCCGATGGTGCAGCAGCAGCGGCAGCGGCAGC
GGTAGACCCGCGCCACGACATATTTCGCGCGGTGTGGCCGCAGCTGCCGT
CCTCGCTGTCCTCGCGCAGCGGCGGCGGCGGCGGCCGGCAGCACGGGAGA
GGGGGGAACAGCAACAGGCGGTTCTCGTCGTCCAGCCACCACCGCGGCGG
CGGCGGCGGCAGCGGAGGAGCAGTAGCGGCCATGCTGGGGTACGACGGTT
CCGCGGGCGGCGGCGGCGGCGGCGGCGGCAGCGCTTCCCTCAGCGACGGC
CAGAGCTTCTTTTTCGGGGACGGCGGAGTGGGCGGGCTTTACGGCGGCAG
TGGTGGCAGCGGCGGCAGCGGCGGCAGCGGTGGAGGCGGCGGCGGCGGCG
GCGGCGGCGGCAGTGGTGGCGGTGGCGGAGCAGGAAGAGGCGTTACTCTC
CTCGGAGTGGAGGACAACCCGAAGGAGCAGTACGCAAAGCAGCTCACGGA
GAGGAAGGCCAGGCTTGAGCGGCAGCAAAGGGTGAGTGAGAGAGTGAGGT
GCTCTTGCTTGCTTTCTGTTTTTTTTGTTTCCATTCTCGAGTGGATCGAG
TCCGTCGTGATGCGGGCAAGCGTTGTGTCTTGTTTGTTTCGAGGAGTTGA
GACAGTGGTGCCGTCATAATACTACCTGTATGCATAGGTCGGTTACAAGA
TTTGTGTGCTGTATGCCGGGTGTTCTTGGGTGAAGGTGGCGGATTGCCGA
TTCGCTGTCTCGCATGGTGTGTGCGAGCTCGTTTTGGTTACCCTCGCGAA
GCATGCGCTGGATTGCTTCGCCGTGGCCCTTCGCTCCCCCATGCCGCCTT
GCCTGAGGCAAAAGGAACGGAATATTGCAAAACAGTTATTCTTTGTTGGC
CAACTTCGTGTTTCCGCTAAAAACGAAAAGCACGCTGCCTCTTGATAAAA
AATGAAAATGAATACAGCAAGAAATCCTGAGGGAGGCGCGGAAGCGCGCA
GACCGGCGGCGGAGGGGCTACGAGCGGGGCCTGGACTGCCTGCACGTGCG
GGTGCTGCCGCCCGTGCTGGGCATGAGCCTGGCGCTGACACTCGTGTTCC
TGGCGGCCTGGATAGACGGAGACGTGCAGGCAAGTGCAAGGAAGGAAGAA
GAAGAGCAGCAGCAGCAGCCGCAGCAGAGCAGTTTATTTAGCCCCCCTTG
CACTCTCTGCGTTTTAGGAAGGAATCGGTGGTCCGTCCTGTGGGGACAAA
TGCCCACCGTCTCGAGGACACATGGTCAATCAATGGTCAAACAGCTAAGG
CATGCAAAACACAAGAGTACGCCCTCCCCCCTCGCCCCCTACCCTAAGCC
TTACTTCAGCCCGCACGTGCACGTGTAGTAGGTATGGGTACGTAAATAGC
TTTTCGTGCTGTGCTTGGCTTGCTATTGTTCGGTGTTTGAGCCGTTTGTG
TTGCATTGGGTCTTGTTTCGATTGCTGACCGGGCGCAGCAGCAGCAGCAG
CAGGATGGTGTCCCCTCATGTCAACCTTGGTTGCGTCTGGCGGTGGCGGA
CTGACTCGGCCTGCCCCGGAGACGAACAATGAACCAAGACGCCGTCCTGA
GCGTCGAGACATGAGCCAGTATGATCGCTACCCCGCACCCTATAGCGCAG
TAGTACAGTAGTACGCTCTGTTGTGCGACGCTAATAACGTCCGCTGTCCC
CCCCCTGCCTTGCAACACCAACCGCCCTATGTGACGACGACGACCACCGG
CACCCTCCTTAAAAATATCAGACGTGGGACTACTGGAAAGTGCTTGCTCC
GATGTGGATCTCTTGCGCCGTGGCTGCGGCGGCGGTGGCGACGGCTGTGC
GGGCGTGGAGGGAGCGCGCCGCCCACGGGTCGTCCGTGCGGTCCACTTAT
TCTGGTGAGGCGCGGAGGGCGGGAAGAGGGTACTCGTGTAAACGCACGCC
GTAGTCGTTAGACCGATAGACCTCGCACCGCTGCGATGCCGGGACGGAGC
GATTTTGCGAGTTTTCGCCGGCCCAGGCTGGCTACGTTTCACAACGATAA
AAGTCATGATCGTTGCGTACGGTGGAGGGGGGGGGGTGTACTCATAGTCG
TGCATGCCTAGTGGTTAGACCATTGACCTCGCATCCCTATAAAGCCGGGA
CGGAGCACGCCGGGTTCTCAACGGACCAGGCTCTCATATCACCATGCGCG
AAGCACCGTGGGGTATTCGGCGAGTCGCATGGAGGGTGCGCTGCATCCTA
AGGGTGTTCGGCGTCTTGTGCTTACTTCCTTGCATATGGATGACAGCTGC
GTATGACTAAATCTATTTTCTGGTGCTTTCACTTCCGTAGACAATAATAA
GCACTGTGTAACGGCCTCGACGGTGCTTGACCAATTTAACACAACGTGGT
GCGATCATCCCCTTTGCGCGGAGTGAGGGTTCTCGACCCCGGACAAAATA
TTCTACTGGGCCACCAATATGGTTACCGGAAAAAGAAACCAAAGCAAAAA
AATACACAGCGAAAACCTGGTTGTCGAGCTCACCAAGTGACAGGCTTGTT
TTACATGCCATGGGGGGGGGGCGCTAGAGAGAGCGTTGGAAGAAGGGGTG
TCAGCCGGTGGGGAGGCAGAGGGTGTTGATCAGTTTCATGTATCTGAACG
ATGACAGGTCCCTCCCGAAACGATACGAAGCCAAGACCTTCTGTACTGGC
CGTCCGTGCCTGCCGCCGTCTGATGTTGCTATGCAGGACACGCCGCCTTT
TTTTTGTGACACGGTGTAGCCTGCGGAGTTGTGTGTGTGTGCGTGTTCCA
CTCTGCGCAAGGTTGTTCCTTGCGCCGAACTGACATGTGCGTGCTATCAT
ATCGTTCGTTGTATCGAAAGGACTCGCCGAGGTTTTGAAATGTTGTCGCA
GTGTGTATCGAAAACGAGTAAACATTTCGGTGCGACTTTCGAGGCGATAT
ACCAAACATTGCCCGAACGATTTTTGACACAGCAGTCGACAAGACCGGTT
TTGGTTATGAGCGGTGCGTCGCTCTCCGTCTCCCACGGTCTATTACGTCA
ATGTGTGTATCATGTATCTCTCGGTGTGTGCCCCCCCCCCCCCTCTCGCT
CTTTGCGTGTGTGGCTCTCTCCTCCCTCACCCCCCTCCGTCCGGAAGTCC
AACACGTGAGGAACGGTTTTCATGTTCCAGAAATCTAACTAAATCGAAAC
CCATTTTCCCTTTTCCCGATGCAGGGCTGAGAGGCATGGTTCGTTACTTT
ATGACGGAGGTGGTCCATGACAGCGTCATTGGCATCATGAGCGGGATCGC
TCTCCTGTTCCTGTTCACGCTTGAGCTGGTGGTGCTGGGACTTCGGGTGG
AGGGGTAAGTCGTGGTCGAACATCCGATCAACCGTGGTCGGTTGTCCCTT
TGGCGTGGCTGTGGGTGATTATCTTGTCATGTTATCGGTGTTGATGGTGA
TGGTGATGGTGATGGTGATGGTGATGGTGATGTGTGTTGTTGTTTTTGAA
TGTCTGGACAACCAGACGAGAAAGGGCGTTGCGTCTGCCGCGTCAATCCG
GGGGAATCCCAAGCGAGCGCGGCTGCCCGAACATCCTGTCTGTACGATGC
TTGATTGCCCACAACGGTAGCACTCCTGTCATGATGGTGTGGTTGGTGAT
GATAAACGTGTCGTTGTTGTTGTTACCGTCGCGGCTGTTGTTGAATGGAT
GCCTCGACAATCAATCGCGCCCAGTTGTTGATGATAATGTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGCTGTT
GAATATGCCTTGACAACCAATCGCGCCCAGAAAAGGGCGTTACATGATAC
AGATTTAACACGTTTTATCCAACCAACCGACATCGTTCGTGTACCCACCC
CCCCTCGTCCCTCTGTCAGGATCACCCACGCCAACTGGTTCGCGGTGTTC
ACCCCGCTCTTCTTCTGCTTCCTCATCCTGTGCCTGTCTCCATGCCTCCA
GTGGGCGTCGTGGGGGGACGGCGGAGTGTACCTCTTGGGGATGCTACTTG
GTTGGATACCGGCGGTTCTCTGCTTGGTGCTTGTGTGCTCAAGGTGAGTG
TGCGTGTGCCCGTGCGCGCGCGTGTGTGTTTGTTTTTTAATTTATTGGCA
TGTACCGCGCTACTGCTGTAACCGGTTGACCAGTGGGAATACGTCAGTTT
CAGTGCGGTTGAAAATAGAAAGAATTTTTTCTAAAAACTACCATGATCTG
AGACCCCGGCCGGAGGAGACGTCAGGCGGGAGGCTGAGCTGCTCTCCGGA
TTGACGGCGAAGAAAATTTGTGTCTGTTCCTTGTCTCCTACCTGACATCG
ACCGCGCTACAACCACGGTACCGAGCACCAGACGGTAGTGGGTCTACTAC
AGCGGAACGAAGACTGATGCGAAAACACGTTCCAATTTCGTGAGTTCAAC
ACGAACGCGCGTTCTAGTCCCCGGGCCCCCTCCCCCCTAAAGACGAAGGG
GTATCATGTGTGAGATCGAGGCGTGCTTGCGCAAGTATGTGTTTTGGGTT
GCGCTGCCAGCGGTCTCTTTTCGTTTTGAATGCTTGGTACTCACCTGGCC
AACGCGCAGACAGCCTCGCACACTTTTTACAGCAGTACCGCCAGTACCGC
CCGTAAACAACGGACCGCGATGTGTCTGCATGTTTTTGGTTGCCACAATC
AAAAATAAGAATGAACAGAAGCTTTTCCAACAGTGAGCAAGCTTTTTGCA
CTACGTAAAACAGACACATGCAGTCTCAACTGCGCCGAACCCAAACCCAA
CCACATCCTGGCAGGCTTCAGGGAGACAACGTTTCGATGAACGTCATCAT
GTCCCCGCTGTGGGCGGTCGACCTCGTCCTCATCCTCACCCCCGTGGCCA
TGGCCATCGCCGTGGCGGTGCGAAGGATGCAGCGCGGAGAGCCCGTGGAG
GCTATGCTGGTGAGCACAACAGCAGTAGCGTAAGCGTAACATCAAAGGGA
GGTTGACCTGTTGGAGACAGCAGTAACCCGTTCGGAGGGACTCGTCGGAA
TTCTTTCTACAGCTCGAGAGCTTAGGGAAGGCTGCGGGATTGTAGCTGTT
GCGAGCCTGTTGGCGCCCCGCCTCACCTTCCCGACACGCACCTAACGAAA
AGCACCCCACCCATACACATTCATCTATTACGCATGTCTAGGTCCACACC
CTGGCCGCGTCCTGGTGCCTGCTGACGCCGGTGCTTGCGCCCGTGGTAGC
CTTCGAGATCGCGCTGGCTGTGTACGTGGAGGGGGAGCGCGATACCCTCA
CCGCCGCGGAGGTGTTCACCCCTCTCATCGTCTGGTGCTGGTGAGTTGAT
TGAGACCAGTTCAATCAAAGAGTCCGGAACCGTCCCAACCAAGCCCTAGC
CCGGACGACAATCAAGCGAGCGTGTTGAATTGTGCTTACTTATTATTTAT
GTTTTTTTTGGGGGGGGGCGTCGTTTCATACGCGAGAGGGCAACAGTGTT
TTCTACTCATTCATGCCGAAACCAATCGCGTACAAGAGCAAGGCCGATAG
ATGATAGGTCACTGCGAGCATACCTGTTTTGGAGGGGGAGAGGGGTACTC
ATAGTCGTGCATGCCGTGGTCGTTAAACCATTGACCTCGCATCCCTACAA
AGCCGGGACGGAACACGCCGGGTTCTCACCGGACCAGGCTCTCACATCAC
CAAGCGCGAAGCGCCGTGAGGTGTTAAAGGGTGCACTGCATCCTGCTGAG
GGTGTTCGGCATCTTGTGCTTACTTCCTTGCGTACGGATGACAGCTGCGC
ATGACTTGATTTATTTTCTGGTGCTTTCACTGTGGTTATAGGCACTACTG
CGTCACTGCCTCGAGGGTGCTTGACCAATTGAACGCAACGTCGTGCGATC
ATCCCCTTTGCCCGGAGTGAGGGTTCTCGACCCCGCACAACATAATTTAT
TCGACCACCATTCCCTATGGTCACCGCAAAAAGAGAAAAACCAGAGGCGA
AAAAAAACGTGCTAATCTTGTGACCGAGCTCGCGAAAGGTTCGGCTTGTT
TCACAACGTCGTTGCCAAGCGGCAAAAACCCAACCCCGGTGGCAAACACC
GCGGGGGGAGTTTTGTTGTGGAGGGGGGGGGGTACGTACACTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTGTCTCACATGTCCGCTCAACGTCCGCTC
AACGCCCACCGCTTCCAACATTTTCGCTCATCCCCCTCCCCGCGCGCACA
ACACAGCGTGCTGTCGCTGATCCTGTGCGGGTACGCCTGCTCCTACCCTC
CGCGCCACCCGGACCCTCAAGACGGCGGCGGCGGCGGCGGCGGCGGCGCC
GGTGACAATGACGATACGACGTCTTCCTCCTTCGCCCCGACTCCCCTGAG
GGGTTTCGCGACGCGCCTGCCCCGCCCCACCGCATCGGCTTCCGTCGGCG
GTCTCGGCAGCGGCGGCAGAGGACGGAGCAGGGGGGGAGGCGGCGGCGGC
GGCTACGGCGCGGCGCCGGGGAGGAGCCGGAGGAGGCAGCAGCAGCAGCA
GCTCCCGCTCCCACCGTCGACGATGTCGCCGTTGCCGGGCTCGCTCCCGC
ACCACCACCACCACCACCACCACCATCACCCGCACCACCACCACCCTCAC
CACCACCACCACCACTACTCGCTGCCGAGGCAGCTGACTCCGGGACCCCA
CGCCAGCGGCGGTAACGGCAACGCCGCCGCCGCCGCCGCCGGCGGGGGAG
CCGATATGCCTCCGGACATGGCCGATATCGTGGCGCTCAGGTCCCAGCTC
GCGGAGCTAGGCGTCATGGCCGGGTTTTTGGACCCGTCCTCTCCGACGGT
TGCCGCGGCCACCGGCAGCATCGATGCCAGAGGGATCCGTTCTAGAAACT
GGGTCGGCGGCGGCGGCGGCGGCGGCGGC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig926:10554..18382- >mRNA_Ecto-sp13_S_contig926.20847.1 ID=mRNA_Ecto-sp13_S_contig926.20847.1|Name=mRNA_Ecto-sp13_S_contig926.20847.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2373bp|location=Sequence derived from alignment at Ecto-sp13_S_contig926:10554..18382- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCATCGAGACCCCGGCTGGTCGGCGGGGCGGCGTTGGAAGAGGTCGA
AGACGACGAAGAAGACAACGCTTACGGCCAGGGAGGCGGCCAGGGGGCGG
GGAGGAGTGTCTTGGAGGAGATGCCTCCCGGCGAGGCTTGTTTTGAGGCG
TTCAACGTGAGCGAAGACGTGACCGCGGCGATCCTGGGAGACCTCGACGC
CCGCGACCTCGCCCGCGCCGCGGCGACCAGCCGCGGCTGGCGCCGGTGCA
CGAGCTCTCGGGTCCTGTGGGCGGCCGTCTACGCGCGGGATTTCCTCGGC
CATGTCCCGCCGCTGCCGCCGCCGCCGCCGCCGCCGGACCTGCAAGCGAC
CCTGGCTGGTGGTGGCAGCGGCGGAGGAGGAGGAGGAGGAGGAGGGGCCC
AGCACCAGCATCGGCATCAGAGTCGCGAGAGCTTCATGCTTGCGGCGGCG
GCCGCGGCGGCGGGAGGCGGGGGCGGCGGGGCCGATGGTGCAGCAGCAGC
GGCAGCGGCAGCGGTAGACCCGCGCCACGACATATTTCGCGCGGTGTGGC
CGCAGCTGCCGTCCTCGCTGTCCTCGCGCAGCGGCGGCGGCGGCGGCCGG
CAGCACGGGAGAGGGGGGAACAGCAACAGGCGGTTCTCGTCGTCCAGCCA
CCACCGCGGCGGCGGCGGCGGCAGCGGAGGAGCAGTAGCGGCCATGCTGG
GGTACGACGGTTCCGCGGGCGGCGGCGGCGGCGGCGGCGGCAGCGCTTCC
CTCAGCGACGGCCAGAGCTTCTTTTTCGGGGACGGCGGAGTGGGCGGGCT
TTACGGCGGCAGTGGTGGCAGCGGCGGCAGCGGCGGCAGCGGCGTTACTC
TCCTCGGAGTGGAGGACAACCCGAAGGAGCAGTACGCAAAGCAGCTCACG
GAGAGGAAGGCCAGGCTTGAGCGGCAGCAAAGGCAAGAAATCCTGAGGGA
GGCGCGGAAGCGCGCAGACCGGCGGCGGAGGGGCTACGAGCGGGGCCTGG
ACTGCCTGCACGTGCGGGTGCTGCCGCCCGTGCTGGGCATGAGCCTGGCG
CTGACACTCGTGTTCCTGGCGGCCTGGATAGACGGAGACGTGCAGGCAAA
CGTGGGACTACTGGAAAGTGCTTGCTCCGATGTGGATCTCTTGCGCCGTG
GCTGCGGCGGCGGTGGCGACGGCTGTGCGGGCGTGGAGGGAGCGCGCCGC
CCACGGGTCGTCCGTGCGGTCCACTTATTCTGGATCACCCACGCCAACTG
GTTCGCGGTGTTCACCCCGCTCTTCTTCTGCTTCCTCATCCTGTGCCTGT
CTCCATGCCTCCAGTGGGCGTCGTGGGGGGACGGCGGAGTGTACCTCTTG
GGGATGCTACTTGGTTGGATACCGGCGGTTCTCTGCTTGGTGCTTGTGTG
CTCAAGGCTTCAGGGAGACAACGTTTCGATGAACGTCATCATGTCCCCGC
TGTGGGCGGTCGACCTCGTCCTCATCCTCACCCCCGTGGCCATGGCCATC
GCCGTGGCGGTGCGAAGGATGCAGCGCGGAGAGCCCGTGGAGGCTATGCT
GGTCCACACCCTGGCCGCGTCCTGGTGCCTGCTGACGCCGGTGCTTGCGC
CCGTGGTAGCCTTCGAGATCGCGCTGGCTGTGTACGTGGAGGGGGAGCGC
GATACCCTCACCGCCGCGGAGGTGTTCACCCCTCTCATCGTCTGGTGCTG
CGTGCTGTCGCTGATCCTGTGCGGGTACGCCTGCTCCTACCCTCCGCGCC
ACCCGGACCCTCAAGACGGCGGCGGCGGCGGCGGCGGCGGCGCCGGTGAC
AATGACGATACGACGTCTTCCTCCTTCGCCCCGACTCCCCTGAGGGGTTT
CGCGACGCGCCTGCCCCGCCCCACCGCATCGGCTTCCGTCGGCGGTCTCG
GCAGCGGCGGCAGAGGACGGAGCAGGGGGGGAGGCGGCGGCGGCGGCTAC
GGCGCGGCGCCGGGGAGGAGCCGGAGGAGGCAGCAGCAGCAGCAGCTCCC
GCTCCCACCGTCGACGATGTCGCCGTTGCCGGGCTCGCTCCCGCACCACC
ACCACCACCACCACCACCATCACCCGCACCACCACCACCCTCACCACCAC
CACCACCACTACTCGCTGCCGAGGCAGCTGACTCCGGGACCCCACGCCAG
CGGCGGTAACGGCAACGCCGCCGCCGCCGCCGCCGGCGGGGGAGCCGATA
TGCCTCCGGACATGGCCGATATCGTGGCGCTCAGGTCCCAGCTCGCGGAG
CTAGGCGTCATGGCCGGGTTTTTGGACCCGTCCTCTCCGACGGTTGCCGC
GGCCACCGGCAGCATCGATGCCAGAGGGATCCGTTCTAGAAACTGGGTCG
GCGGCGGCGGCGGCGGCGGCGGC back to top
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