mRNA_Ecto-sp13_S_contig7423.18603.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: A0A6H5JXQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ5_9PHAE) HSP 1 Score: 431 bits (1108), Expect = 5.700e-147 Identity = 245/284 (86.27%), Postives = 248/284 (87.32%), Query Frame = 1
Query: 163 EDMFGVGESVSKGDGGKGGDVLTLIGSDVGRRSRSSKLPGMRVTGNVMSEHDSMRPVALPVTATAQTPGSRLFAQANNQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASTPVRGKXXXXXXXXXXGPAVKEEXXXXXXXXXXXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADEVSGGXXXXXXXXXXDGFEGXAGAGGDVVGP 1014
E+MFGVGESVSKG GGK GDVLTLIGSDVGRRSRSSKLPGMRVTGNVMSE DSMRPVALPVTATAQTPGSRLFAQANNQAELTEEEDSSLFFVQLPTKLPRPLAA QRGKDGAS PVRGK GPAVKEE XXXXXXXXXXX AAAEKASEIPADDVAFDQGLRRMRPGKIGKLY+HQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADE+SGG DGFEG AGAGGDV GP
Sbjct: 168 ENMFGVGESVSKGGGGKEGDVLTLIGSDVGRRSRSSKLPGMRVTGNVMSEDDSMRPVALPVTATAQTPGSRLFAQANNQAELTEEEDSSLFFVQLPTKLPRPLAAFQRGKDGASAPVRGKGKGKATG---GPAVKEEAGESGAGXXXXXXXXXXXKGAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADEISGGGGGGE-----DGFEGGAGAGGDVGGP 443
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: D8LHB7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB7_ECTSI) HSP 1 Score: 351 bits (901), Expect = 9.380e-115 Identity = 223/288 (77.43%), Postives = 227/288 (78.82%), Query Frame = 1
Query: 169 MFGVGESVSKGDGGKGGDVLTLIGSDVGRRSRSSKLPGMRVTGNVMSEHDSMRPVALPVTATAQTPGSRLFAQANNQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASTPVRGKXXXXXXXXXXGPAVKEEXXXXXXXXXXXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADEVSGGXXXXXXXXXXDGFEGXAGAGGDVVGPVKMEVS 1032
MFGVGESVSKG GGKGGDVLTLIGSDVGRRSRSSKLPGMR NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGAS PVRGK XXXX GPAVKEE XXXXXXXXXXXXX AEKASEI ADDVAFD+GLRRMRPGKIGKLY+HQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADE+SGG XXXXXXX DGFEG GGDV GPVKMEV+
Sbjct: 268 MFGVGESVSKGGGGKGGDVLTLIGSDVGRRSRSSKLPGMR-----------------------------------NQAELTEEEDSSLFFVQLPTKLPRPLAACQRGKDGASAPVRGKGKXXXXATG-GPAVKEEAGESGAGXXXXXXXXXXXXXXXAEKASEIAADDVAFDRGLRRMRPGKIGKLYVHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADEISGGGXXXXXXX--DGFEGGXXXGGDVGGPVKMEVA 517
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: A0A835ZEC9_9STRA (RNA polymerase III RPC4-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC9_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.130e-25 Identity = 74/219 (33.79%), Postives = 100/219 (45.66%), Query Frame = 1
Query: 283 MRVTGNVMSEHDSMRPVALPVTATAQTPGSRLFAQANNQAELTEEEDSSLFFVQLPTKLPR--------PLAACQRGKDGASTPVRGKXXXXXXXXXXGPAVKEEXXXXXXXXXXXXXXXXXXXXAAAEKASEIPADDVAFDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRR 915
M+V GN HD +RP+ +P + LFA+ ++ A L EED +FFVQLPT LPR P G DG G AAA+ + E +D L M PG+IGKL I +SG +L++ GV+L V G+P FVE+ ++ KQKT FGQVT+R VC P+FE L+ +
Sbjct: 251 MKVLGNAFQPHDVLRPIVIPFSKNTAVRPEDLFARPHDAAALQAEEDEGIFFVQLPTALPRVFPESMEHPSQPTDGGGDGXXXXXHGAVGGTRAQGAK---------------------------AAADTSGEADGSP-GYDNSLTTMLPGRIGKLQIRRSGTVQLLLAGVALDVSAGMPCHFVEELTCVNPKQKTMSMFGQVTRRLVCAPNFEDLHEQ 441
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: A0A7S2XXH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXH9_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 9.440e-22 Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 1
Query: 646 KASEIPADDVAFDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRAD 921
++ E +DV D+ LR++ G++GKL IH+SGK +L IGG++ V PGLP F + ++ID +QK C FG+V+KR VCTPDFEQL+++ +
Sbjct: 21 ESMEEEDEDVIHDKSLRQLPSGRLGKLRIHRSGKVKLWIGGMAFEVSPGLPCRFAQDVIAIDKEQKKCCFFGEVSKRLVCTPDFEQLFQKRE 112
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: A0A7S3UWU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWU6_HETAK) HSP 1 Score: 90.9 bits (224), Expect = 4.940e-19 Identity = 39/86 (45.35%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 667 DDVAFDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYRRADE 924
+D D GLRR+ PG++G++ +H SG+ +L +G V PGLP FV+ V++DA+ T C FGQ++KR VCTPDFE+L+ ++
Sbjct: 5 EDPVADGGLRRVAPGRVGRVRVHASGRVKLTLGDTVFDVAPGLPCHFVQDVVAVDAEGGTACFFGQLSKRVVCTPDFEKLFAEKEK 90
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: A0A6G0WW31_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW31_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 2.880e-11 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 649 ASEIPADDVAFDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQLYR 912
A+E DD+ FD+ L M G +GK+ IH+SGKA LV+G + + PG P +F E+ VSID K++ G V+ V TPDFE L R
Sbjct: 244 ATERSQDDL-FDKSLHAMPGGFMGKINIHKSGKAVLVLGDKTFNIAPGHPPTFYEEAVSIDTKEELLSMLGPVSHHLVVTPDFEALLR 330
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: W4GQG3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQG3_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.550e-10 Identity = 40/89 (44.94%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 640 AEKASEIPADDVAFDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQL 906
A K+SE + FD+ L M G +GK+ IH+SGKA LV+G + + PG P SF E+ VSID K K G V V TPDF+ L
Sbjct: 252 ASKSSEN-GTETRFDKSLSAMPGGYLGKINIHKSGKAVLVLGDKTFDLAPGQPPSFYEEVVSIDVKDKLLSMLGPVATHLVITPDFDSL 339
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: A0A1W0AB28_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AB28_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 5.500e-10 Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 1
Query: 679 FDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQL 906
FD L M G +GK+ IH+SGKA LV+G + + P P +F E+ VSID + GQ+T V TPDFE L
Sbjct: 246 FDNALNNMPSGYLGKIQIHKSGKAVLVLGDKTFDIAPAQPPTFYEELVSIDTNDRVLSHLGQITNHLVITPDFESL 321
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: A0A6A5AC38_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AC38_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 8.650e-10 Identity = 36/79 (45.57%), Postives = 46/79 (58.23%), Query Frame = 1
Query: 670 DVAFDQGLRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQGVSIDAKQKTFCSFGQVTKRAVCTPDFEQL 906
+ FD+ L M G +GK+ IH+SGKA LV+G + + PG P SF E+ VSID K K G V V TPDF+ L
Sbjct: 266 ETRFDKSLSAMPGGYLGKINIHKSGKAVLVLGDKTFDLAPGQPPSFYEEVVSIDVKDKLLSMLGPVATHLVITPDFDSL 344
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Match: T1HGK6_RHOPR (Uncharacterized protein n=1 Tax=Rhodnius prolixus TaxID=13249 RepID=T1HGK6_RHOPR) HSP 1 Score: 65.5 bits (158), Expect = 9.860e-10 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 691 LRRMRPGKIGKLYIHQSGKARLVIGGVSLVVHPGLPVSFVEQ--GVSIDAKQKT--FCSFGQVTKRAVCTPDFEQL 906
LR + PG+IGKL I +SGKARL++G V L V PG +F + V++D QKT + G +T R V TPD+E L
Sbjct: 26 LRNLPPGRIGKLQILKSGKARLILGDVKLWVEPGTQTAFKQDLISVNLDPNQKTGNMINMGDLTTRMVITPDWESL 101 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7423.18603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7423.18603.1 >prot_Ecto-sp13_S_contig7423.18603.1 ID=prot_Ecto-sp13_S_contig7423.18603.1|Name=mRNA_Ecto-sp13_S_contig7423.18603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=345bp DEQDRKRSSHSRKSGLGGSAVKEDAEGGGSSPAAGLKGSASGGSGGAGEEback to top mRNA from alignment at Ecto-sp13_S_contig7423:72..5302+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7423.18603.1 ID=mRNA_Ecto-sp13_S_contig7423.18603.1|Name=mRNA_Ecto-sp13_S_contig7423.18603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5231bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7423:72..5302+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7423:72..5302+ >mRNA_Ecto-sp13_S_contig7423.18603.1 ID=mRNA_Ecto-sp13_S_contig7423.18603.1|Name=mRNA_Ecto-sp13_S_contig7423.18603.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1035bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7423:72..5302+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |