mRNA_Ecto-sp13_S_contig732.18485.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig732.18485.1
Unique NamemRNA_Ecto-sp13_S_contig732.18485.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: A0A6H5L6K7_9PHAE (TFIIB-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6K7_9PHAE)

HSP 1 Score: 834 bits (2154), Expect = 2.270e-285
Identity = 729/898 (81.18%), Postives = 737/898 (82.07%), Query Frame = 1 
Query:    1 QTFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQTVAFPGVEDASAAAGATGGSXXGSALXXXXXXXXXXGAIAEKSVLVSDIRMDPPAFIANRIRDGALKMPWTEQTITETPGAKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRSGVKRKRSPKDKAPRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANKVWVENDEEGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXEXXEGXXXXXXXXXXXXXXEXXDADYDXXXXXXXXXXXXXXXARLSSKMKVDANTEEGREALTRHVLHIRATKRGASKAKSRAKRSKVESDVYSCLENMFDEDEERGLSVDRGGGXXXXXXXXXXXXXXXXXXXMEATGDXXXXIDGGGGTADRSAGKQAKSPASPASDETLKSREGGAAGEDSXXXXXXXXXXXXXXXXXXXXXXXXXXGLEWGVYLRTEEDSDRTKKEWEKEHKDWVEDQTEKSRILSDGTGLNPSGGVPKKKRKYTLSGSHAVGKNFGEAISLEAAKSKSLKIDHAALQRVMNLDGSLKQVNEGDDVMEEVFEDNLAPPMPSKNSKGIRGRGKSPLTASLSSSSTPAMLKPFTGGAVHPPARRGNTAXXXXXXXXXXXXXXXXXXXXXXXKGAAPVTQPAAVVKAPWARAGPNDGGEKAIKDALALLTSGGLAALPSVSGKSPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVEEVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMYGEVDEDDDPYGEEA 2694
            +TFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQTVAFPGVEDASAAA            XXXXXXXXXX   AEKSVLVSDIRMDPPAFIANRIRDGALKMPWTEQT+TET GAK  XXXXXXXXXXXXXXXXXXXXXXXXXX GVR GVKRKRSPKDKAPRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                               XXXXXXXXXXXXX XX     XXXXXXXXXXXXXX ARLSSKMKVDANTEEGREALTRHVLHIRATKRGASKAKSRAKRSKVES+VYSCLENMFDEDEERGLS+DRGG XXXXXXXXXXXXXXXXXXX      XXXX            GK AKSPA PASDETLK R+GGAAGEDS     XXXXXXXXXXXXXXXXXXXX GLEWGVYLRTEEDSDRTKKEWEKEHKDWVEDQTEKSRILSD TGLNP GGVPKKKRKYT SGSHAVGKNFGEAISLEAAKSKSLKIDHAALQRVMNLDGSLKQVNEGDDVMEEVFEDNLAPP+PSKNSKGIRGRGKSPLTASLSSSSTPAMLKPFTGGAV PPARRGNT             XXXXXXX    K  AP+ QPAAVVKAPWARAGPNDGGEKAIKDALALL SGGLAALPSVSGKS PA          XXXXXX      XXXXXXXXXXXXXXXXXXX ERVEEVEG            XXXXXXXXXXXXXXXXXX AMYGE+D   DPYGEEA
Sbjct:  185 KTFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQTVAFPGVEDASAAA---------XXXXXXXXXXXXXXXTAEKSVLVSDIRMDPPAFIANRIRDGALKMPWTEQTVTETAGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVRPGVKRKRSPKDKAPRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSARLSSKMKVDANTEEGREALTRHVLHIRATKRGASKAKSRAKRSKVESEVYSCLENMFDEDEERGLSIDRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGK-AKSPAPPASDETLKIRDGGAAGEDSGNKDQXXXXXXXXXXXXXXXXXXXXDGLEWGVYLRTEEDSDRTKKEWEKEHKDWVEDQTEKSRILSDETGLNPPGGVPKKKRKYTFSGSHAVGKNFGEAISLEAAKSKSLKIDHAALQRVMNLDGSLKQVNEGDDVMEEVFEDNLAPPVPSKNSKGIRGRGKSPLTASLSSSSTPAMLKPFTGGAVLPPARRGNTTATAACSDVGPKAXXXXXXXRGGGKRVAPIAQPAAVVKAPWARAGPNDGGEKAIKDALALLKSGGLAALPSVSGKSSPAAAAGSGAGAAXXXXXXRGTKAVXXXXXXXXXXXXXXXXXXXTERVEEVEGEEDGDEPSGVVAXXXXXXXXXXXXXXXXXX-AMYGELDXXXDPYGEEA 1032
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: A0A0L0DXS5_THETB (Transcription factor IIIB 60 kDa subunit n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DXS5_THETB)

HSP 1 Score: 120 bits (300), Expect = 2.680e-26
Identity = 57/119 (47.90%), Postives = 92/119 (77.31%), Query Frame = 1 
Query:    4 TFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNK 360
            TF K  + LN+   +P++DP++YI RFAAKL+ G+K + V M+AL+++ SMKRD++  GR+P+GIC AAL +A R++   R+++EI + V++CD T+RKRL EFEATP+S++++ + N+
Sbjct:   19 TFLKFKQLLNIT--LPVIDPSLYIHRFAAKLEFGAKKHVVAMSALRLVQSMKRDWIHHGRRPSGICGAALLIAARMHGFRRTQKEITQVVRICDLTLRKRLGEFEATPSSEMSLSQFNE 135
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: UPI0018D68484 (transcription factor IIIB 90 kDa subunit-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D68484)

HSP 1 Score: 125 bits (315), Expect = 8.920e-26
Identity = 60/121 (49.59%), Postives = 92/121 (76.03%), Query Frame = 1 
Query:    1 QTFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 363
            +T+ KL + L++   VP +DP +YI RFA KL+   KT+ V MTAL+++G MKRD++ +GR+P+G+C AAL ++ R++   R++++I + VKVCDAT+RKRL EFE TP+ QLT++E NK+
Sbjct:  167 KTYLKLSQELHIN--VPAIDPCLYIHRFAHKLEFTDKTHEVSMTALRLVGRMKRDWMHTGRRPSGLCGAALLVSARLHNFNRTQKDIIRVVKVCDATLRKRLTEFEETPSGQLTIDEFNKI 285
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: A0A5J4TJR1_9EUKA (Putative transcription factor IIIB 90 kDa subunit (Fragment) n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4TJR1_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 1.090e-25
Identity = 55/116 (47.41%), Postives = 88/116 (75.86%), Query Frame = 1 
Query:   13 KLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNK 360
            K IK  ++   +PI+DP+++I RF+A LD G KT+ V +TALK++  MKRD++ +GR PAG+C AAL +A R++  ERS+++I + V++C+ T+R RLLEFE TPT+ ++++E N+
Sbjct:  111 KFIKTFHIT--MPIIDPSLFIHRFSANLDFGEKTHQVSLTALKLVQQMKRDWIVTGRSPAGVCGAALLIAARIHNFERSQKQIVEVVRICNHTLRNRLLEFEETPTAHMSLDEFNR 224
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: UPI0014551B42 (transcription factor IIIB 90 kDa subunit-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014551B42)

HSP 1 Score: 125 bits (314), Expect = 1.180e-25
Identity = 61/121 (50.41%), Postives = 91/121 (75.21%), Query Frame = 1 
Query:    1 QTFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 363
            +T+ KL + L++   VP +DP +YI RFA KL+L  K + V MTAL+++G MKRD++  GR+P+G+C AAL +A R++   R++++I + VKVCDAT+RKRL EFE TP+ QLT++E NK+
Sbjct:  167 KTYLKLSQELHIN--VPAIDPCLYIHRFAHKLELTEKVHEVSMTALRLVGRMKRDWMHLGRRPSGLCGAALLVAARLHNFNRTQKDIIRVVKVCDATLRKRLTEFEETPSGQLTIDEFNKI 285
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: A0A1Y1W0A4_9FUNG (Uncharacterized protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W0A4_9FUNG)

HSP 1 Score: 121 bits (304), Expect = 1.830e-25
Identity = 61/119 (51.26%), Postives = 86/119 (72.27%), Query Frame = 1 
Query:    7 FQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 363
            F KL++ LNLQ  VP+VDP++YI RFAA L+ G KT AVCM A++++  M RD++ +GR+PAGIC A L +A R++   R++ EI + VKV DAT+R+RL EF +TP+  LTV +   L
Sbjct:   26 FAKLVQALNLQ--VPLVDPSLYISRFAAMLEFGDKTQAVCMDAIRLVQRMDRDWIRTGRRPAGICGACLLVAARMHNFRRTQLEIIRVVKVADATLRRRLAEFRSTPSGDLTVADFRSL 142
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: A0A8B7Y533_ACAPL (B-related factor 1 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y533_ACAPL)

HSP 1 Score: 124 bits (311), Expect = 2.670e-25
Identity = 59/121 (48.76%), Postives = 92/121 (76.03%), Query Frame = 1 
Query:    1 QTFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 363
            +T+ KL + L+++  VP +DP +YI RFA KL+   KT+ V MTAL+++  MKRD++ +GR+P+G+C AAL ++ R++   R++++I + VKVCDAT+RKRL EFE TP+ QLT++E NK+
Sbjct:  165 KTYLKLSQELHIK--VPAIDPCLYIHRFAHKLEFNDKTHEVSMTALRLVARMKRDWMHTGRRPSGLCGAALLVSARLHNFNRTQKDIIRIVKVCDATLRKRLTEFEETPSGQLTIDEFNKI 283
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: A0A3P3YAP5_PLABS (B-related factor 1 n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YAP5_PLABS)

HSP 1 Score: 122 bits (307), Expect = 2.880e-25
Identity = 58/126 (46.03%), Postives = 92/126 (73.02%), Query Frame = 1 
Query:    1 QTFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQTVA 378
            +TF K ++ LN+   +PI+DP++++ RFAA+L+   KT+ V MTAL+++  M+RD++A GR+PAGIC A+L +A R++   RS++E+ + VK+C+AT+RKR+LEF  TP++  TV E N  P   A
Sbjct:  163 KTFMKFVRLLNIS--MPIIDPSLFVHRFAARLEFDDKTHLVAMTALRLVSRMRRDWMAVGRRPAGICGASLIIAARLHGFRRSQKEVGRIVKICEATLRKRILEFIETPSAYQTVSEFNATPDDFA 286
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: A0A7S2B4G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B4G7_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.050e-25
Identity = 58/122 (47.54%), Postives = 84/122 (68.85%), Query Frame = 1 
Query:    7 FQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLPQT 372
            F K  + LNL+ Q+P++DP++YI RFAA++DLG KT+ V   AL+I+ +MKRD++ +GR+PAGIC AAL ++ R N   R++ E+ K  +VC  T+R RL EF  T  + LT EEL    +T
Sbjct:  179 FLKFCRLLNLEDQIPLIDPSLYIHRFAARMDLGQKTSMVSQAALRIVANMKRDWMLTGRRPAGICAAALLISARANGFPRTQAEMVKVFRVCGMTIRMRLTEFSTTHAASLTNEELRNSEET 300
[Close]
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Match: UPI0003F0D412 (transcription factor IIIB 90 kDa subunit-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0D412)

HSP 1 Score: 123 bits (309), Expect = 3.900e-25
Identity = 60/121 (49.59%), Postives = 91/121 (75.21%), Query Frame = 1 
Query:    1 QTFQKLIKHLNLQTQVPIVDPAMYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALTLATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKL 363
            +T+ KL   L++   VP +DP +YI RFA KL+ G KT+ V MTAL+++  MKRD++ +GR+P+G+C AAL ++ R++   R+++EI + VKVCDAT+RKRL EFE TP+S+LT++E  K+
Sbjct:  164 KTYLKLSTELHIN--VPAIDPCLYIPRFAHKLEFGDKTHDVSMTALRLVSRMKRDWMHTGRRPSGLCGAALLVSARLHDFNRTQKEIIRVVKVCDATLRKRLTEFEETPSSRLTIDEFQKI 282
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig732.18485.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6K7_9PHAE2.270e-28581.18TFIIB-type domain-containing protein n=2 Tax=Ectoc... [more]
A0A0L0DXS5_THETB2.680e-2647.90Transcription factor IIIB 60 kDa subunit n=1 Tax=T... [more]
UPI0018D684848.920e-2649.59transcription factor IIIB 90 kDa subunit-like n=1 ... [more]
A0A5J4TJR1_9EUKA1.090e-2547.41Putative transcription factor IIIB 90 kDa subunit ... [more]
UPI0014551B421.180e-2550.41transcription factor IIIB 90 kDa subunit-like n=1 ... [more]
A0A1Y1W0A4_9FUNG1.830e-2551.26Uncharacterized protein n=1 Tax=Linderina pennispo... [more]
A0A8B7Y533_ACAPL2.670e-2548.76B-related factor 1 n=1 Tax=Acanthaster planci TaxI... [more]
A0A3P3YAP5_PLABS2.880e-2546.03B-related factor 1 n=2 Tax=Plasmodiophora brassica... [more]
A0A7S2B4G7_9STRA3.050e-2547.54Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI0003F0D4123.900e-2549.59transcription factor IIIB 90 kDa subunit-like n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig732contigEcto-sp13_S_contig732:9987..21823 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score744.6
Seed ortholog evalue5.3e-212
Seed eggNOG ortholog2880.D8LS89
Preferred nameBRF1
Model size3233
KEGG koko:K15196
Hectar predicted targeting categoryother localisation
GOsGO:0000126,GO:0000976,GO:0000992,GO:0000994,GO:0000995,GO:0001006,GO:0001016,GO:0001025,GO:0001032,GO:0001067,GO:0001112,GO:0001120,GO:0001156,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006139,GO:0006259,GO:0006351,GO:0006352,GO:0006355,GO:0006359,GO:0006383,GO:0006384,GO:0006399,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009303,GO:0009304,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015074,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031974,GO:0031981,GO:0032091,GO:0032196,GO:0032774,GO:0032991,GO:0034367,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043487,GO:0043488,GO:0043496,GO:0043565,GO:0043933,GO:0044085,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044798,GO:0045893,GO:0045935,GO:0045945,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051098,GO:0051100,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0061013,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070063,GO:0070893,GO:0070897,GO:0070898,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090074,GO:0090304,GO:0090576,GO:0097159,GO:0097659,GO:0098781,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141
Exons10
EggNOG free text desc.DNA-templated transcriptional preinitiation complex assembly
EggNOG OGsCOG1405@1,KOG1598@2759
Cds size2631
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig732.18485.1prot_Ecto-sp13_S_contig732.18485.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig732 10523..21757 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464000.2777479-UTR-Ecto-sp13_S_contig732:9986..105221681464000.2777479-UTR-Ecto-sp13_S_contig732:9986..10522Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig732 9987..10522 -
1681464000.5012698-UTR-Ecto-sp13_S_contig732:21757..218231681464000.5012698-UTR-Ecto-sp13_S_contig732:21757..21823Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig732 21758..21823 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464000.3494143-CDS-Ecto-sp13_S_contig732:10522..112471681464000.3494143-CDS-Ecto-sp13_S_contig732:10522..11247Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 10523..11247 -
1681464000.361953-CDS-Ecto-sp13_S_contig732:12113..122471681464000.361953-CDS-Ecto-sp13_S_contig732:12113..12247Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 12114..12247 -
1681464000.376191-CDS-Ecto-sp13_S_contig732:15026..151121681464000.376191-CDS-Ecto-sp13_S_contig732:15026..15112Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 15027..15112 -
1681464000.3872507-CDS-Ecto-sp13_S_contig732:15613..158651681464000.3872507-CDS-Ecto-sp13_S_contig732:15613..15865Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 15614..15865 -
1681464000.431949-CDS-Ecto-sp13_S_contig732:16253..164661681464000.431949-CDS-Ecto-sp13_S_contig732:16253..16466Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 16254..16466 -
1681464000.4479835-CDS-Ecto-sp13_S_contig732:16990..170651681464000.4479835-CDS-Ecto-sp13_S_contig732:16990..17065Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 16991..17065 -
1681464000.4588122-CDS-Ecto-sp13_S_contig732:17421..180851681464000.4588122-CDS-Ecto-sp13_S_contig732:17421..18085Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 17422..18085 -
1681464000.4689903-CDS-Ecto-sp13_S_contig732:20250..205311681464000.4689903-CDS-Ecto-sp13_S_contig732:20250..20531Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 20251..20531 -
1681464000.4791548-CDS-Ecto-sp13_S_contig732:21181..213071681464000.4791548-CDS-Ecto-sp13_S_contig732:21181..21307Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 21182..21307 -
1681464000.489227-CDS-Ecto-sp13_S_contig732:21682..217571681464000.489227-CDS-Ecto-sp13_S_contig732:21682..21757Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig732 21683..21757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig732.18485.1

>prot_Ecto-sp13_S_contig732.18485.1 ID=prot_Ecto-sp13_S_contig732.18485.1|Name=mRNA_Ecto-sp13_S_contig732.18485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=877bp
MYIKRFAAKLDLGSKTNAVCMTALKIIGSMKRDFLASGRQPAGICCAALT
LATRVNRIERSKEEIRKAVKVCDATVRKRLLEFEATPTSQLTVEELNKLP
QTVAFPGVEDASAAAGATGGSGGGSALARGGSGGAGAGAIAEKSVLVSDI
RMDPPAFIANRIRDGALKMPWTEQTITETPGAKAGAGKGASGGTGKKTGR
ATAAPGASAGARGVRSGVKRKRSPKDKAPRSKKKSPPKRRRAAAKGGDAS
SDEGSGEEEVGVAGRRRTLPKRKAAANAAANKVWVENDEEGDGEDGSGAD
GGGGDDDDDPEYSSGKEDDDEEDEGEEKEGDEEEGEEEEEEEDADYDKEE
DEEEGEETEEESARLSSKMKVDANTEEGREALTRHVLHIRATKRGASKAK
SRAKRSKVESDVYSCLENMFDEDEERGLSVDRGGGGSGSGGSGGLGSADV
AAKAMEATGDDDNDIDGGGGTADRSAGKQAKSPASPASDETLKSREGGAA
GEDSGNKSQNKKDDNGNNKGDDNDQDDEEDGLEWGVYLRTEEDSDRTKKE
WEKEHKDWVEDQTEKSRILSDGTGLNPSGGVPKKKRKYTLSGSHAVGKNF
GEAISLEAAKSKSLKIDHAALQRVMNLDGSLKQVNEGDDVMEEVFEDNLA
PPMPSKNSKGIRGRGKSPLTASLSSSSTPAMLKPFTGGAVHPPARRGNTA
ATAASSDVEPKAAAGGGAGRGGGKGAAPVTQPAAVVKAPWARAGPNDGGE
KAIKDALALLTSGGLAALPSVSGKSPPAAAAGSGAGAASAAAAARGTKAA
VTPAPTAASEPVAAAALVATERVEEVEGEEDGDEPSGVVAAEEEEEEEEE
EEDDDEDDDAMYGEVDEDDDPYGEEA*
back to top

mRNA from alignment at Ecto-sp13_S_contig732:9987..21823-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig732.18485.1 ID=mRNA_Ecto-sp13_S_contig732.18485.1|Name=mRNA_Ecto-sp13_S_contig732.18485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=11837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig732:9987..21823- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACGTTCCAGAAGCTGATCAAGCACCTCAATCTGCAGACTCAGGTCCC
CATCGTAGACCCCGCGATGTACATCAAGCGCTTCGCCGCAAAGTTGGACC
TTGGCAGCAAGACGAACGCGGTGTGCATGACTGCTCTGAAGGTACATCTC
CCACTAGCCACAGGTCGTGTCTTCTCTCCGTTGCTTCGTGTCACGCCCAT
GCCACGGCGCGGTAGCACCCACTCTCTGGTTTCCTTCTATTTGGTGGATA
ACAAACCTATGCGCGCGCCCTCCTCCACCTCGTCCTGTGCTTCGCGGTAG
ATCAAGCCCGCTCTCTCATACACCGCGTGTGCAGCTTGTTGGGGGGGTGG
AGTACATGAGGTGTAAACTAGAAGCACTGACGATCTTCGCACCCGTTGCG
GGCCATATCTTGCCGCATGGTAGCGCGAGAGCCCCGTCGTTTTGAAATCG
CTTGAGAATCGAAAGGGGAGGGAAGCAACGTATCCAAACTCGAGAACCAA
TCTTTTCATTTACCAGATAATCGGTTCGATGAAGAGGGACTTCCTCGCCT
CGGGTCGTCAGCCGGCGGGGATCTGCTGCGCGGCCCTCACCCTGGCAACG
CGAGTCAACCGCATCGAGAGGTCCAAAGAAGAGATCCGAAAGGTCGGGTT
AACCATGGGGAGCTTCGGTTTTGGGTCTACTTTTCGTTGTCCTCGCGTTT
CGTCTATGGCTGCGCACACGTATCTCCTTGTGGTCAAGATGATGGGCTAC
CTTGCTAGTTTGTGCGGTTTATCGACAAGCGTTGACGCAGAACGACGGGA
TCAGATTCGGCGAGAGAGAACCCGTCTTTGGGTCTGTCGTGCAGCAGCGA
CTTGGCGATTGCAGGCTACCCAGTGACGAGCTGCGTGCGGCAGAAAATTT
TCAGTAGAAGGAAGATGCGTGCGGGGACAATCTGTGCTTCAAATCTTGTT
GAATCTCCTCAAAAATATAGCTTATTCCTTTTTGAGGCCTGAAGCTGGCA
CTCCATGCCGAAAACACGTCAAACATGTTTCCTGTTTGGAATATCATGAG
TGCTGTGCCACGGTGCCTTTCACTGCTCGAATCAGAGAACCCCGTCTCGT
GCGTGGCGTCGAGAATGACCTCTCTCGCGCAGATAACACATTTGTTTCTG
TGGCCGAAGAGTTCAACATTTTTACCTTCGCTATGTATCGTTGTCGATGT
CTAAGTCGTCATTGTTTGCCGTTGCTGCTTCGGTGCTTTCCCCCCCGGTG
GTTGTGGCCGGCCTGTTCGCTGCTTGCTTCCCTGTCCCCCAGGCCGTCAA
GGTTTGCGACGCTACCGTCCGCAAACGCCTCCTCGAGTTCGAGGCGACCC
CCACCTCTCAGCTCACCGTCGAGGAGCTAAACAAGCTGCCGCAGACCGTG
GCATTCCCGGGAGTGGAAGACGCTAGCGCTGCCGCTGGTGCCACCGGCGG
CAGCGGCGGCGGATCGGCATTGGCCCGCGGTGGCTCTGGCGGGGCGGGTG
CAGGAGCGATCGCGGAGAAGTCCGTGCTAGTGAGCGACATTCGGATGGAC
CCTCCCGCTTTCATCGCTAACCGGTGAGCGTGGGGAGATGGAAACGAAGG
TGGTCGGTTTTTGGCGATAGGTCCCCGTTGTTACCCTTGCCCCGAGGAGG
TTGCAGAAGCAATGGCGTTCCGCGTACTTTTCCCCCGACTTAACGTCTCA
ACGCTCCTGACGGCGACCGAGGCGATGGTTTTTGAGTTGTCGTCTTACCT
ACTCTTGTTTGCGCTTTCGCCTCCATCTCACACAGATTGCGCGAATGGTC
GACAAACCTACCGTATTGCCTTTTTGTTCTTGCTCGTTACATAATCCGCG
GAAGGCACCGTCGTGACCCTCTCATTTTCGTCGAACTCTTGCCCGCTTGT
CTCCAAGGCGTTGACCCCTAGATGGATGCACAAGGCCCTGAGCCACGGCC
CATGTGCAAGAGTCGCATCAAAGCAGGTCACTGCCTCTGTCTACATCCAC
TCGTGATCTTCTAATGAGTATGCCGGAATGGGCGGAGGGGGGCGACATTA
ACGCTTTCCACGCGAGACCAGCTAACTTTTTGTAAAATTGGAATCCGGGG
GTGCCGTGATGCGTTCTACCCCCAGAGAATGAGAACATTTTGCGATACGT
GGCGCGAAAAACACACCAGCTAATGTCGGGTACTCAGTGTCCGCCTTGCA
GCGGTTGACACGTTTGGAATCAGCCCCTCGAGGCTGTGTGCTCCACTGGT
ATGGGCTTCTCTTAGCCATAAGCTTGGGGAGCTACGTAGGGTGGAGTGTG
CGTTCGTCGCTCATGGTAGCTAGGAGTTTCCCAGTCGGGATTGTTGCCAG
CAACCCTTAGACCAAGCGCGGAGGGCGTTATGGGCAAGGCTGTATCCCGA
CGACGTTTTGTTTTCGTCGAGATCGCCCGGAGGGTGGTTGAGTGGTCGGA
GCCTTTGGTCTCGGAGAAGAAGATGAGGGACTCTTGAGATGCGGATGCCG
GAGAAGCAGCAGACGAAAGGAGCGCCACCCCCACCACCTCAGGCACGGCT
GGTGATCGAATTGCGGAAAAGAAGCAACAGCCCAGACCACCGAGTTCCGA
TACGTGCTACAAGTAGAGAAGATGGCGATATCACGCAAGAGGTGAACCAC
CGGAGCAGAGCCGCGTGGACATGCATATGGAACTACTCCCCGGAGCTCTT
CGATAGAAAGACAGACAGCACCGTGGAGATCAGAGTCCAATCGCCCAGAA
CGGAGGAGGAGGTGGTGGCTCTACCGTACGTATGTATGACGTGAGCCCCG
CGATGAGACCACTACCAGGTGCTGAGAAGGAGGATACGCGACCGGCTCCT
TCTACGAATTTTCGAGCACCGCCGCACGCGCGGAAACTGTGGACAGCTAT
CCTACGCCTCCGGACCCTACAAAAGTATTCCAAAGCTTGGAGGCCACTTG
CAGCTACGACAACTGCTGTTCGCGGGAGACGTGACCACACAACGGGACCG
ACGGATCCCGAAGCGAATGATGTGTTGGAACATTGTTGGGGGAGAGGACC
CAGGCAAGCGGTGCCCGGAGTAACATTGGCTGACGTGCCTCCCTAAAGAA
CGACTTGCAAGCATTCCGCGCCACAGACGAATCTACGGAGGGCGACAGGA
GACCCATTCGGAGGTCCTCAAGCCATCTGGACCTTCGCAGCGAAGGTGGA
GCGGAGTTCGCGGGGGTGCCACGGGGGGCATGCAGGTTCATGGTCGCCTG
ACTCAAGGAGCAATAGAAGCCAGTCGACTGCGTGCGGCTTACACAGGACA
GCAAAAGAACCGCAGAGGCCGAAACTATAACCGAGCGAAAGAGCGGGAGA
GGCACACGGGGCATACGCGTAGACAGATCAAATTTGAGGACGCGACTGCT
GCTGAGGAGAGCACGACAGGGATGGCTGAACGTGCTGCGAGATATGCGCG
TTTGCCTGACTGACAGTGACGAAGGTGGCAGGAACACCGGCCGTCCAACG
GACAACGAATCACGTGGTATTCACGTTTGTGGTTACGAACCGGGCTACGG
CATGCACGCCCCGAGCCGTAGATCTACCCTCGAAAGACTAGGGCAACTCC
GCTTGGCGTTCACATTGTCCTATCCTCTCTCTCGTCGTTGTGACTGCATC
TTTCTCCATCAACATCCATTTGAAAATACCCGTCTGGCGACCCCCTCCAC
CCCCCCCCCCACCCTCTAAAACGTTGTTTCGGGATCAGCATCCGGGACGG
TGCCCTCAAGATGCCGTGGACGGAGCAGACGATAACAGAGACTCCGGGGG
CTAAGGCAGGAGCGGGAAAAGGCGCAAGCGGCGGCACCGGAAAGAAGACC
GGCAGAGCGACCGCTGCCCCCGGCGCCAGCGCGGGTGCTCGGGGCGTGCG
CTCGGGGGTGAAGAGGAAGCGGAGCCCGAAGGACAAGGCTCCCCGCTCCA
AGAAGAAGTCGCCTCCGAAGCGGAGGCGTGCTGCCGCCAAAGGAGGGGAC
GCTTCGAGCGATGAAGGGAGCGGGGAGGAGGAGGTCGGAGTGGCCGGGCG
GAGAAGGACGTTACCTAAGAGGAAGGCGGCGGCCAACGCTGCTGCGAACA
AGGTGTGGGTAGAGAATGACGAGGAGGGCGACGGTGAAGACGGGAGTGGG
GCCGATGGCGGCGGCGGCGATGACGACGACGACCCCGAGTACTCATCTGG
CAAAGAGGATGATGATGAGGAGGACGAGGGGGAGGAAAAGGAAGGGGATG
AGGAGGAGGGGGAGGAGGAAGAGGAAGAGGAGGATGCTGATTATGATAAG
GAAGAGGATGAGGAAGAGGGAGAGGAGACAGAGGAGGAGAGCGCGCGACT
ATCTTCCAAGATGAAGGTCGATGCTAACACGGAAGAGGGGCGGGAGGCGC
TGGTGAGCGTCCTCTTGAAAGGCAGGATGTGTCTGTTTCATGGCTTGGAC
TGTTGTGTTTTAGCCGTGTGCTCCCCGGCGTGGTTTGGCCTGTTGCTATC
GTGCGGGTTGCGTGTCGTTTGGTTCATGTTGCAATAGGGAGCAGTTGAGA
AGTCGACAACGTGGACATATCCCCTTGATTCTGTTCTTTGAGAGAGAGAT
TTGTTATAGCTTGCGGCCGTCACTCCTCCATATGTGATTCAACGTCCATC
TCAGAATATCGTCCACGAATCTGTAGCCCGCACCCCCGTCCCCTGCCGGT
GGAAGATGCTTTCATGACGACATCTTCTCGGTGTTGACGTGTTTTTCGGT
CGTCGCAGACGCGGCACGTGTTGCACATAAGGGCGACCAAGAGGGGTGCC
AGCAAAGCCAAGTCGAGAGCGAAGCGCAGTAAGGTACGTGGCGTTGGGGA
ACCGCAGCGCGGACGACTACGGGGAACAGACCTAAGCAGACGCTATCGGT
TTACGGTGACGAGGACGACGTGTCCTCATGTATGGGAGATGTTTTGTGCC
GAGCTCCGCGTGGCTCGTGACGTACTGTGCTTTTGAGGCGCTTTGCCGTA
TGCACCACAACGAAAGCTCGGGCGCTTTGTTGAGTGGCGCTGCTGCATTT
GACTGAGTCTTGAGCAAGAACGATGCCGGGGAAGCTTCGACCTCGATCTG
GCGACAGTGTTGTCGGTTCGTTTTGTCTCTTCCGGGCATCCCTTACGACA
GCAGCGCACGGTCAAGACGAACGAACACGCCATCATCAAGCAACGCATGG
CGTGATTCTTTGACATGGCAGTCACGGAATCGGCGCTTGTGGCTATTCGG
GTGATTTACCGCCGTCGCGCACGTAACGCTACCGACAACCCCACCGCTGT
AGTCCGCCGTTGGCACGTTCTAAGCAGGCGTGGTTGGTTGCCTTTTGATT
TGTGCAGGTGGAGAGTGACGTGTACTCCTGCCTGGAGAACATGTTCGACG
AGGACGAAGAGCGGGGCCTGAGCGTTGATCGAGGTGGAGGCGGCAGCGGT
AGCGGCGGCAGCGGCGGCCTTGGGAGCGCAGACGTGGCAGCCAAGGCCAT
GGAGGCTACAGGAGACGACGATAACGATATCGATGGTGGCGGCGGTACCG
CCGACAGAAGCGCTGGGAAGGTATGTTGTTGTATGGCGTTCTCGCATGGT
CTTTGAGTAGACAGGACCTTTTATTTTTGATGAGTTTGGTACTCGAGTTC
GTGCGCTAGCTGCTTACTCCACAAGAAGCGAGAGTGCCACTGACGCCTGG
GTGTGGGTCGAAATCTTTTCACACGAGTTGATCTGGTTGCATCTGGGCCC
ATGAGTCTGCTCGTCGTCTTTTCCTGGAGTGAAACTAGTAGTGCACATGA
TCACCGACCCGTCTGTCGAAACATAAAACTGGTACAGGGCATTTGACTAG
GAACAGTTTTCGCGTTTGGCAGCAAACACCCCCCGGCAACAGCAACAGCT
ACAGCCACTATAACAAGACAACACCCCAGCCTTCTCAACGCCTCCCTCAT
GCATGCAGCAGGCGAAGTCTCCGGCGTCGCCGGCTTCCGACGAAACCCTC
AAGAGCAGAGAAGGGGGCGCGGCCGGCGAGGACAGCGGGAACAAGAGCCA
AAACAAGAAGGATGACAACGGCAACAATAAGGGCGACGACAACGACCAGG
ACGACGAGGAAGACGGTCTAGAGTGGGGGGTGTACTTGAGGACAGAGGAG
GACAGCGACAGGACCAAGAAAGAGTGGGAGAAGGAGCACAAAGACTGGGT
GGAAGACCAGGTGAAGATTGAGCAGATGCTGCTCTTGAGGTTTGACGTCC
CAAGGGCCTCAATGCCACCGTTTTTGCCGGGGGTGTGTTTCTGTCGCTTC
CATTTGACCTTCCGCTCGGGCTCAGGTTGCGGTTGTGTTGGTTGGCCTCC
GGCTCATTCCGTCGTTTCTTTCACTGTGACGGTTCGGTTTTCGCTGCGAG
TAATTTCCTCCTCTCCTCGATCTCCTTGGAGCCCAGTGGACTGTCGGGCG
ATGCTGGTGGGCATGGCATTACTTCTTGTTGACCCTGATACCTGGTCCCT
GTGTGTTTCAAGTGAAAAATTCGTCGCCGAGGTGTTGGTTTTTTCATACA
TACGAACGTGATAATCTGTTGTTGCCCAGCACCGAAAGTGCGTAGCAGCT
GGTTGTTCTTCGTGGATTTATTCCGGTATTGTGCTACGGATACGCTTCGC
TTCAAATGACGGCGCTTTTTTCGTTTATTGCTTCTCCCCGACGGACGCTC
TCATGCGGTAGACCGAAAAATCAAGAATTCTCTCGGACGGGACTGGTCTG
AACCCGTCCGGTGGAGTTCCGAAGAAGAAGCGCAAGTACACCCTTAGGTA
AGTGCGAGGAGAGACGGGGTCCGTGCCCCTCGCCCCCACCTCCTTATTGT
CCACTATTGTCAACACGATTAGTGACATACCATTCACGCACTTTTTGCCC
TCAGCGAGTCTTGTGTTCCGTGGATGCCTTGCACACGTTGGTGCCCTAGC
CTTTCCCGATCAAAGGGAGATACGCCGCCGTCCATTCGTGCGCAACCCTC
GTTTCCCGATACTTGCTCACAGCTTTGGTGTCGCCACGGTTGTACGCAGC
ACCGTGTTTGTGAGGTCTATCCGTGTCTCCTTGTGCGTATGCATATGCAA
ATATTGCAGGTTTTGTTTGTTGGCCAATAAAATCTGTTAGGGTCACCCTT
GCTGTGTGTTCTCCATCGCCATTTTTCTGGAGTATTTTTCTGGAGTATTT
TTCTGGAGTATTTTCTGTCCGGCGCACGCATGACGTATTTGCCTTCCCTA
TGTATAACGAGAGCGTGATATTTTGAAATCAAGTCCCCGGCGTAAAATCA
ATGTTCTTCGAAGTACCATAGGGAGCATTGTCTTGTTGAGCCTCTCACAG
GCGCCAATGGTGCCAAAATTCTTTCAGCGGGCTCAGATTGGGAGAGCAGC
ACACCGCGTGACGAGTTCGCACGTCGCCTGTTCTCTCTCCCTTCATCCAT
TCCCCCTTGATCGTGGTACCCTTCCACAGATGAAAATGAATCGCTCAAAC
GTTCTCCCACAAGCGACGCTTGAAGTGATTTTTACGGGCTGGTAGACGTA
GACTTCGCCCCGAGTGGTGCGATTCGATTCACTCATGGTGGAAATTTTCC
GAGGCGCATTCATCCGTCAGTGACGCGCGCTGTCTGTAGGTTTGCGTTGG
CGTCTAAGATATTGGTCATAGGCCCTGTGAGAGCCGTTTTACTCTTACCC
CCAGATGTTCGAAGTATTTCTCATTTCATATATGTGTCATTCTTCCTTTG
GGTTTCAGTCCGAGCGCCCAATGCTCGGAGGTTTATTTCACACGTGGTCG
ATTTATTTCTCACCTTCCGCTTCTGTTACGTTCCGCTTAAGTCTCAGAGC
TCAATGTTCAGACGGACGCTCTACTACACACAATATTCACTTTGAACTCT
TTTCTCGATATGGCGAGTCTATTTTTTTTCATTCTGTCGCTGTGTGTCCG
GCGGAGCGCCTAATGTTCACATATGTGCGCAATTTTACCCTCACGTTGCG
CTTTAGACCGTGGGAATGATATTTCAACACATGATATATCTGCATCGTCG
TCTATTGTGAATGAATTCCTTCTCTTGTTGTCGTACGTGTGGACCACTGA
CGTCAAACGGTATGTCATTCACTCGCTCTCCATCCGCACCCACGTTGCTC
TTTTACTACAGGATGTCGTCCTTCTTGTAGGCCGATATATTACATAACTT
GTCATCACGGCGCCTCATTACGTTTTTTCGCGCTGGACAAACGTCGGCCG
CGAAGTCGTTTTTTTCACTCCCGTCCCTACTTTTTCTCTGCTCCTCGTTC
CTCGCTCTGGTTCTTACTCACATTTCAATTTCAACATGTCGTACTCCCAT
CTTGTGACATGTTCGTCGGCCTTACAACACTGGCGGTGCCGGCACATGCG
TCACCGCTTCATTTTTTCCTGGCGTTAGATTTCACTTTCACATCGCACAG
TTGCGACGTTGTGAAATTTTTCACTCTGGGTTCTCTCAGTAGACAATACC
CATACCCTATGTGTCATTCGCAGACCGCCGGAGACAATTGTCACCGGTAA
GAGTGAAGACATACTCGCGGACGGCGTGACGGCATTGGATTAGTGTCAAT
CAGCCTCGCGTCAACCCACTTGATACGTACGTGGTACGAAAGAGGAAACA
GAGTGAAAACAGACACCAGAGTGAAACCCTTCGCAAATCAAACGCCGAGA
AGAGATTTCAGCTTAGCGAAGGCCAAACCCGTTGCCGAAAAGCCGTTCAA
CGCGCCATCATATGAAGTATTTACTCTATCTAGCACGAAGAGCGAGTATA
TCTAGATCAAAGAGCGAGTGAAGTCTTAGGTGAAGCTTGACACGGAAAGG
TGGCCACCTTGTCGTGTACACACAATGCCCGACGCCGAACGCCGAAGGGC
AGTGAAATTTAGTCTTTTAAGCAGAAAAATATGACCCTTCGGCAGGTCAT
CAAGCTCTGAAACGCTATCAAAGCCCGCCTGGTGGAACCAAGAAGAGGGC
TAGAACCCAGGGGAAAGAGGATCATTCGTAAGCCTACTGAACCGGCCACA
ATCCTCTAAGACATGCTCGCGGAACAGAGGAAAGCAAGAGAACCGCAGAG
TAATAAGCGGTTTAGCTACCCATCCCGGCTTCCGTGTACCCGTCACATGC
AGACGTTTGGAGGAGACAACATCGCATCGTTAAGAGTGAAGACATGCTTG
TGATTGCTGTGCGTGGGATTTGTCCAATATGTTGACACGCTGAGTACTTC
AAACGAGTTGTCTGCCGTGATTACACTCTTGACTTGCTATGTTTTGTCTA
GCGGGCTTTGGCCAATTTGCATAATAGCCTCATTCTCGTGGAATGTCTCA
TTCCCTGGAATAATTGATGCACTCTTGTTTTGCTGGGTTCCACACCTGAT
GGGCTTTGATAGGGTACACAGCTTTTTCATTTGTTAGCAAACGAAATTCC
GCCTCTGGCGTGCAGTCTTTTCGCTACGCAACCAACTTCGCATAGCTGAG
GGTCATCATCGCGTTGGCAACTGCATCTCGTCGGCATCCACGTTGCACTC
TCTTTTGGCGCTTCGTCGAACTACAGCGGGTCCCATGCCGTTGGCAAGAA
TTTCGGCGAGGCCATTTCGTTGGAGGCCGCCAAGAGTAAGTCGCTCAAGA
TCGACCACGCTGCTCTCCAGCGGGTCATGAATCTCGACGGGAGCCTCAAG
CAGGTTAACGGTAAGTGCGACCGGGAGAGGGAATGCAGGAAGAACGACTG
AACATCGGGTAAACAGACTGCAACGTAGTCGGGTCGGTTGGCCTTTAGCA
GATGTCCTTCTGTGACATTGTTTCAGACCATGTGTGAGTACCACTGTCCT
AGGCTGTTCTCATTTTGGCTTGTGGAACACACGAGCGGGCAGGACTCCGC
CTACCCGGGGTTTGAAGGGTGAACTCTAGCGTACGGTGTTGTTTATCTTC
ACGAGGTTCATGGTACCGCCGCGTGCGGTTCTGTTGTTTGTCAATGGCGC
TTGTCCATTGCATCATATCGCGGCCGTGCCGCGACGAAATTGGTCGTGTG
CCAACTCTCGCTTGAGATGGTGGTGTGATGCTCAAGAGACGGCCGGCTGG
ATGGTTGAATTGCTACAACATAGTACATGAAATGATGTGATGGGCGCTCC
CGCTGGCTGAGTCGTTTGCATCGTTGATCTCGGTGTTGTTTATCTTCACG
AGGTTCATGGTACCGCCGCGTGCGGTTCTGTTGTTTGTCAATGGCGCTTG
TCCATTGCATCATATCGCGGCCGCGACGAAATTGGTCGTGTGCCAACTCT
CGCTTGAGATTGTGGTGTGATGCTCAAGAGACGGCCGGCTGGATGGTTGA
ATTGCTACAACATAGTACATGAAATGATGTGATGGGCGCTCCCGCTGGCT
GAGTAGTTTGCATCGTTGATCTTCACCGCAACCTTCGGTTCAATTTGATG
CCCTCGCGCTCATCTTCGATTCCTCCGGCTCCCGCTGTCCTCCCCGTATA
TAGGGTGGGGCTGGTTCTCAGGCCAACCAGCTGACTTTGTGTGTGTCTGA
TTCGTCGTCTTTGCGCGTGCGGACAGAGGGTGATGACGTCATGGAAGAAG
TCTTCGAGGACAATCTGGCACCCCCTATGCCATCGAAGAACAGCAAGGGA
ATCCGTGGCCGGGGCAAATCGCCGCTCACCGCAAGCCTGTCTTCGTCCTC
CACCCCGGCAATGCTCAAGCCGTTCACTGGGGGTGCCGTACATCCGCCCG
CGCGGCGCGGAAACACCGCCGCCACTGCCGCCTCCAGCGATGTTGAGCCG
AAGGCCGCCGCTGGTGGCGGCGCGGGCAGGGGCGGCGGCAAGGGAGCCGC
CCCGGTCACCCAGCCGGCGGCGGTGGTCAAGGCGCCGTGGGCCAGGGCCG
GGCCGAATGACGGCGGAGAGAAGGCCATCAAGGACGCGCTTGCCTTGCTT
ACATCGGGTGGGTTGGCCGCTCTCCCCAGCGTCTCGGGCAAGTCTCCGCC
TGCTGCTGCCGCCGGCAGTGGCGCCGGTGCTGCTTCGGCTGCGGCAGCTG
CTCGAGGGACCAAGGCAGCAGTGACCCCAGCGCCGACGGCGGCAAGCGAA
CCTGTGGCTGCCGCCGCCCTGGTGGCCACGGAAAGAGTAGAGGAGGTCGA
GGGCGAAGAGGACGGCGATGAGCCCTCTGGCGTGGTAGCTGCGGAAGAGG
AGGAGGAAGAGGAGGAGGAAGAGGAGGATGACGATGAGGATGACGATGCC
ATGTACGGGGAAGTGGATGAGGACGACGATCCCTACGGGGAGGAGGCGTG
ATTAGCCTCAGAGAGTCGAGTTGACGCGAAGGGTGTCGGGCTGACTGTCA
TGTGTCGAGTGCTTCACGGTTCAAGCGTGAGGGATAGGTCTTTGCTCAGG
GAAACAATGGGGTTTGTTTTGCTGTTTGCGTGGATGTGGTTTCAGGTTCG
GTAACCCGTAACAGATGACCGGGGCGTAGATGGACCGGAAACTGGGTGAA
GATTTGCCGGCTGGAGAATGTTGACGTGGGACAGTGTGCTGATTTTTACG
GGGAACAGGACCGAATCAAGGAGGAAGAATAGAATTGTGAAACATGAAGT
TGAGGGAAAATTATTGGCGGCACAATGTGATCCATACCATGGACTCGCTT
TTGCCAACGAATGGAACATGAGCGTAACCGCCCACTGATTCTTCAAAAGC
GCTTGTCATTGTTGTTCAAACTGCTTCGCACAGCAGGTACGCCTTCCAGA
TTATATGTGCGTCTTTTTTAGCCGCATCGGCAGCAGCTGCCCGTTTGGCG
GCGTAAGTGTAAACAAGAAGTGCGATTTATCCAAGCC
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig732:9987..21823-

>mRNA_Ecto-sp13_S_contig732.18485.1 ID=mRNA_Ecto-sp13_S_contig732.18485.1|Name=mRNA_Ecto-sp13_S_contig732.18485.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2631bp|location=Sequence derived from alignment at Ecto-sp13_S_contig732:9987..21823- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTACATCAAGCGCTTCGCCGCAAAGTTGGACCTTGGCAGCAAGACGAA
CGCGGTGTGCATGACTGCTCTGAAGATAATCGGTTCGATGAAGAGGGACT
TCCTCGCCTCGGGTCGTCAGCCGGCGGGGATCTGCTGCGCGGCCCTCACC
CTGGCAACGCGAGTCAACCGCATCGAGAGGTCCAAAGAAGAGATCCGAAA
GGCCGTCAAGGTTTGCGACGCTACCGTCCGCAAACGCCTCCTCGAGTTCG
AGGCGACCCCCACCTCTCAGCTCACCGTCGAGGAGCTAAACAAGCTGCCG
CAGACCGTGGCATTCCCGGGAGTGGAAGACGCTAGCGCTGCCGCTGGTGC
CACCGGCGGCAGCGGCGGCGGATCGGCATTGGCCCGCGGTGGCTCTGGCG
GGGCGGGTGCAGGAGCGATCGCGGAGAAGTCCGTGCTAGTGAGCGACATT
CGGATGGACCCTCCCGCTTTCATCGCTAACCGCATCCGGGACGGTGCCCT
CAAGATGCCGTGGACGGAGCAGACGATAACAGAGACTCCGGGGGCTAAGG
CAGGAGCGGGAAAAGGCGCAAGCGGCGGCACCGGAAAGAAGACCGGCAGA
GCGACCGCTGCCCCCGGCGCCAGCGCGGGTGCTCGGGGCGTGCGCTCGGG
GGTGAAGAGGAAGCGGAGCCCGAAGGACAAGGCTCCCCGCTCCAAGAAGA
AGTCGCCTCCGAAGCGGAGGCGTGCTGCCGCCAAAGGAGGGGACGCTTCG
AGCGATGAAGGGAGCGGGGAGGAGGAGGTCGGAGTGGCCGGGCGGAGAAG
GACGTTACCTAAGAGGAAGGCGGCGGCCAACGCTGCTGCGAACAAGGTGT
GGGTAGAGAATGACGAGGAGGGCGACGGTGAAGACGGGAGTGGGGCCGAT
GGCGGCGGCGGCGATGACGACGACGACCCCGAGTACTCATCTGGCAAAGA
GGATGATGATGAGGAGGACGAGGGGGAGGAAAAGGAAGGGGATGAGGAGG
AGGGGGAGGAGGAAGAGGAAGAGGAGGATGCTGATTATGATAAGGAAGAG
GATGAGGAAGAGGGAGAGGAGACAGAGGAGGAGAGCGCGCGACTATCTTC
CAAGATGAAGGTCGATGCTAACACGGAAGAGGGGCGGGAGGCGCTGACGC
GGCACGTGTTGCACATAAGGGCGACCAAGAGGGGTGCCAGCAAAGCCAAG
TCGAGAGCGAAGCGCAGTAAGGTGGAGAGTGACGTGTACTCCTGCCTGGA
GAACATGTTCGACGAGGACGAAGAGCGGGGCCTGAGCGTTGATCGAGGTG
GAGGCGGCAGCGGTAGCGGCGGCAGCGGCGGCCTTGGGAGCGCAGACGTG
GCAGCCAAGGCCATGGAGGCTACAGGAGACGACGATAACGATATCGATGG
TGGCGGCGGTACCGCCGACAGAAGCGCTGGGAAGCAGGCGAAGTCTCCGG
CGTCGCCGGCTTCCGACGAAACCCTCAAGAGCAGAGAAGGGGGCGCGGCC
GGCGAGGACAGCGGGAACAAGAGCCAAAACAAGAAGGATGACAACGGCAA
CAATAAGGGCGACGACAACGACCAGGACGACGAGGAAGACGGTCTAGAGT
GGGGGGTGTACTTGAGGACAGAGGAGGACAGCGACAGGACCAAGAAAGAG
TGGGAGAAGGAGCACAAAGACTGGGTGGAAGACCAGACCGAAAAATCAAG
AATTCTCTCGGACGGGACTGGTCTGAACCCGTCCGGTGGAGTTCCGAAGA
AGAAGCGCAAGTACACCCTTAGCGGGTCCCATGCCGTTGGCAAGAATTTC
GGCGAGGCCATTTCGTTGGAGGCCGCCAAGAGTAAGTCGCTCAAGATCGA
CCACGCTGCTCTCCAGCGGGTCATGAATCTCGACGGGAGCCTCAAGCAGG
TTAACGAGGGTGATGACGTCATGGAAGAAGTCTTCGAGGACAATCTGGCA
CCCCCTATGCCATCGAAGAACAGCAAGGGAATCCGTGGCCGGGGCAAATC
GCCGCTCACCGCAAGCCTGTCTTCGTCCTCCACCCCGGCAATGCTCAAGC
CGTTCACTGGGGGTGCCGTACATCCGCCCGCGCGGCGCGGAAACACCGCC
GCCACTGCCGCCTCCAGCGATGTTGAGCCGAAGGCCGCCGCTGGTGGCGG
CGCGGGCAGGGGCGGCGGCAAGGGAGCCGCCCCGGTCACCCAGCCGGCGG
CGGTGGTCAAGGCGCCGTGGGCCAGGGCCGGGCCGAATGACGGCGGAGAG
AAGGCCATCAAGGACGCGCTTGCCTTGCTTACATCGGGTGGGTTGGCCGC
TCTCCCCAGCGTCTCGGGCAAGTCTCCGCCTGCTGCTGCCGCCGGCAGTG
GCGCCGGTGCTGCTTCGGCTGCGGCAGCTGCTCGAGGGACCAAGGCAGCA
GTGACCCCAGCGCCGACGGCGGCAAGCGAACCTGTGGCTGCCGCCGCCCT
GGTGGCCACGGAAAGAGTAGAGGAGGTCGAGGGCGAAGAGGACGGCGATG
AGCCCTCTGGCGTGGTAGCTGCGGAAGAGGAGGAGGAAGAGGAGGAGGAA
GAGGAGGATGACGATGAGGATGACGATGCCATGTACGGGGAAGTGGATGA
GGACGACGATCCCTACGGGGAGGAGGCGTGA
back to top