mRNA_Ecto-sp13_S_contig6534.17347.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI) HSP 1 Score: 275 bits (704), Expect = 1.150e-86 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
Query: 22 QVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
QVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV
Sbjct: 64 QVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 200
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA) HSP 1 Score: 250 bits (638), Expect = 4.620e-77 Identity = 121/137 (88.32%), Postives = 128/137 (93.43%), Query Frame = 1
Query: 22 QVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKALYDTFSLFGNILSCKVATDDAG SKGYGYVHYE SAN AIAKI+GM++ GKQV
Sbjct: 85 QVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQV 221
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A6A5AH64_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AH64_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.540e-72 Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 1
Query: 25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D G SKGYGYVHYE +A +AI KINGMLIAG +V
Sbjct: 58 VGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEV 193
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN) HSP 1 Score: 232 bits (592), Expect = 1.210e-70 Identity = 116/136 (85.29%), Postives = 122/136 (89.71%), Query Frame = 1
Query: 25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D G SKGYGYVHYE +AN AIAKINGMLIAG +V
Sbjct: 51 VGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEV 186
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A7R9WA81_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WA81_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.790e-70 Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 1
Query: 25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATD-DAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
VGPV+SIRVCRD VTRRSLGYAYVNFH VADAERALDTMNFTTIKD+ CRIMWSQRDPS+RRS VGNIFVKNL E++DNK LYDTFSLFGNILSCKV TD D+G+SKGYGYVHYE +A AI K++GMLI G++V
Sbjct: 80 VGPVSSIRVCRDAVTRRSLGYAYVNFHQVADAERALDTMNFTTIKDRPCRIMWSQRDPSIRRSNVGNIFVKNLHESIDNKQLYDTFSLFGNILSCKVVTDRDSGKSKGYGYVHYETAEAAQAAIEKLDGMLIDGQEV 216
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A7J6RF44_PEROL (Protein phosphatase PP2A regulatory subunit B n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RF44_PEROL) HSP 1 Score: 218 bits (554), Expect = 1.590e-69 Identity = 103/136 (75.74%), Postives = 121/136 (88.97%), Query Frame = 1
Query: 25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
VGPVASIRVCRD+VTRRSLGYAYVNFHNVADAERALDT+N++ I+ + CRIMWS RDP+LR+SG N+FVKNLD+T+DNKALYDTFSLFGNILSCKVATDD G+S+GYG+VH+E SA AI+K+NGM+I K V
Sbjct: 64 VGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALDTLNYSPIRGKQCRIMWSHRDPTLRKSGNANVFVKNLDKTIDNKALYDTFSLFGNILSCKVATDDDGKSRGYGFVHFENDESAQKAISKLNGMMIGDKAV 199
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD) HSP 1 Score: 228 bits (580), Expect = 7.550e-69 Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 1
Query: 25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDA-GESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D+ G SKGYGYVHYE +A+ AIAKINGMLIAG +V
Sbjct: 55 VGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDNTTGASKGYGYVHYETAEAAHEAIAKINGMLIAGTEV 191
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC) HSP 1 Score: 227 bits (579), Expect = 8.910e-69 Identity = 114/137 (83.21%), Postives = 124/137 (90.51%), Query Frame = 1
Query: 25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDD-AGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D+ +G SKGYGYVHYE +AN AIAKINGMLIAG +V
Sbjct: 54 VGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDVSIDNKALYDTFSLFGNILSCKVAIDNTSGGSKGYGYVHYETAEAANEAIAKINGMLIAGSEV 190
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: D0RMB6_PHYIT (Polyadenylate-binding protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMB6_PHYIT) HSP 1 Score: 226 bits (577), Expect = 8.930e-69 Identity = 114/142 (80.28%), Postives = 123/142 (86.62%), Query Frame = 1
Query: 10 FSVGQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDA-GESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
+ + VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA + G SKGYGYVHYE +A AIAKINGMLIAG +V
Sbjct: 9 YKIKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEV 150
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.760e-68 Identity = 118/140 (84.29%), Postives = 124/140 (88.57%), Query Frame = 1
Query: 25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKV--ATDD--AGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKALYDTFSLFGNILSCKV A DD + E +GYGYVHYE +AN AIAKINGMLIAGK+V
Sbjct: 38 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKALYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEV 177 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6534.17347.1 >prot_Ecto-sp13_S_contig6534.17347.1 ID=prot_Ecto-sp13_S_contig6534.17347.1|Name=mRNA_Ecto-sp13_S_contig6534.17347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp MFPFSVGQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTback to top mRNA from alignment at Ecto-sp13_S_contig6534:6628..7814+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6534.17347.1 ID=mRNA_Ecto-sp13_S_contig6534.17347.1|Name=mRNA_Ecto-sp13_S_contig6534.17347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1187bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6534:6628..7814+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6534:6628..7814+ >mRNA_Ecto-sp13_S_contig6534.17347.1 ID=mRNA_Ecto-sp13_S_contig6534.17347.1|Name=mRNA_Ecto-sp13_S_contig6534.17347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=435bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6534:6628..7814+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |