mRNA_Ecto-sp13_S_contig6534.17347.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6534.17347.1
Unique NamemRNA_Ecto-sp13_S_contig6534.17347.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 1.150e-86
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
Query:   22 QVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            QVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV
Sbjct:   64 QVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 200          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 250 bits (638), Expect = 4.620e-77
Identity = 121/137 (88.32%), Postives = 128/137 (93.43%), Query Frame = 1
Query:   22 QVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD  CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKALYDTFSLFGNILSCKVATDDAG SKGYGYVHYE   SAN AIAKI+GM++ GKQV
Sbjct:   85 QVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQV 221          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A6A5AH64_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AH64_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.540e-72
Identity = 111/136 (81.62%), Postives = 121/136 (88.97%), Query Frame = 1
Query:   25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D  G SKGYGYVHYE   +A +AI KINGMLIAG +V
Sbjct:   58 VGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEV 193          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 232 bits (592), Expect = 1.210e-70
Identity = 116/136 (85.29%), Postives = 122/136 (89.71%), Query Frame = 1
Query:   25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D  G SKGYGYVHYE   +AN AIAKINGMLIAG +V
Sbjct:   51 VGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEV 186          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A7R9WA81_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WA81_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.790e-70
Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 1
Query:   25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATD-DAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            VGPV+SIRVCRD VTRRSLGYAYVNFH VADAERALDTMNFTTIKD+ CRIMWSQRDPS+RRS VGNIFVKNL E++DNK LYDTFSLFGNILSCKV TD D+G+SKGYGYVHYE   +A  AI K++GMLI G++V
Sbjct:   80 VGPVSSIRVCRDAVTRRSLGYAYVNFHQVADAERALDTMNFTTIKDRPCRIMWSQRDPSIRRSNVGNIFVKNLHESIDNKQLYDTFSLFGNILSCKVVTDRDSGKSKGYGYVHYETAEAAQAAIEKLDGMLIDGQEV 216          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A7J6RF44_PEROL (Protein phosphatase PP2A regulatory subunit B n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RF44_PEROL)

HSP 1 Score: 218 bits (554), Expect = 1.590e-69
Identity = 103/136 (75.74%), Postives = 121/136 (88.97%), Query Frame = 1
Query:   25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            VGPVASIRVCRD+VTRRSLGYAYVNFHNVADAERALDT+N++ I+ + CRIMWS RDP+LR+SG  N+FVKNLD+T+DNKALYDTFSLFGNILSCKVATDD G+S+GYG+VH+E   SA  AI+K+NGM+I  K V
Sbjct:   64 VGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALDTLNYSPIRGKQCRIMWSHRDPTLRKSGNANVFVKNLDKTIDNKALYDTFSLFGNILSCKVATDDDGKSRGYGFVHFENDESAQKAISKLNGMMIGDKAV 199          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD)

HSP 1 Score: 228 bits (580), Expect = 7.550e-69
Identity = 115/137 (83.94%), Postives = 123/137 (89.78%), Query Frame = 1
Query:   25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDA-GESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D+  G SKGYGYVHYE   +A+ AIAKINGMLIAG +V
Sbjct:   55 VGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDNTTGASKGYGYVHYETAEAAHEAIAKINGMLIAGTEV 191          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC)

HSP 1 Score: 227 bits (579), Expect = 8.910e-69
Identity = 114/137 (83.21%), Postives = 124/137 (90.51%), Query Frame = 1
Query:   25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDD-AGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D+ +G SKGYGYVHYE   +AN AIAKINGMLIAG +V
Sbjct:   54 VGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDVSIDNKALYDTFSLFGNILSCKVAIDNTSGGSKGYGYVHYETAEAANEAIAKINGMLIAGSEV 190          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: D0RMB6_PHYIT (Polyadenylate-binding protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMB6_PHYIT)

HSP 1 Score: 226 bits (577), Expect = 8.930e-69
Identity = 114/142 (80.28%), Postives = 123/142 (86.62%), Query Frame = 1
Query:   10 FSVGQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDA-GESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            + +  VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA +   G SKGYGYVHYE   +A  AIAKINGMLIAG +V
Sbjct:    9 YKIKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEV 150          
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.760e-68
Identity = 118/140 (84.29%), Postives = 124/140 (88.57%), Query Frame = 1
Query:   25 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKV--ATDD--AGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQV 432
            VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK   CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKALYDTFSLFGNILSCKV  A DD  + E +GYGYVHYE   +AN AIAKINGMLIAGK+V
Sbjct:   38 VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKALYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEV 177          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6534.17347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI1.150e-86100.00Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
A0A835YVH9_9STRA4.620e-7788.32Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
A0A6A5AH64_9STRA1.540e-7281.62Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A2D4BDJ5_PYTIN1.210e-7085.29Polyadenylate-binding protein n=2 Tax=Pythium TaxI... [more]
A0A7R9WA81_9STRA1.790e-7080.29Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7J6RF44_PEROL1.590e-6975.74Protein phosphatase PP2A regulatory subunit B n=3 ... [more]
K3X8Z0_GLOUD7.550e-6983.94Polyadenylate-binding protein n=2 Tax=Pythiaceae T... [more]
A0A067BXY4_SAPPC8.910e-6983.21Polyadenylate-binding protein n=4 Tax=Saprolegniac... [more]
D0RMB6_PHYIT8.930e-6980.28Polyadenylate-binding protein n=1 Tax=Phytophthora... [more]
A0A7S2V0G2_9STRA1.760e-6884.29Polyadenylate-binding protein n=2 Tax=Fibrocapsa j... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6534contigEcto-sp13_S_contig6534:6628..7814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score276.9
Seed ortholog evalue5.2e-72
Seed eggNOG ortholog2880.D8LTD5
Preferred namePAB1
Model size435
KEGG koko:K13126
KEGG Pathwayko03013,ko03015,ko03018,map03013,map03015,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003727,GO:0003729,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005737,GO:0005840,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006446,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008428,GO:0009889,GO:0009894,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010608,GO:0015031,GO:0015833,GO:0015931,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031326,GO:0031329,GO:0031503,GO:0032268,GO:0032991,GO:0033036,GO:0034248,GO:0034613,GO:0035770,GO:0036464,GO:0042886,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051028,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051641,GO:0051649,GO:0060211,GO:0060255,GO:0061013,GO:0065007,GO:0065009,GO:0070717,GO:0070727,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0097159,GO:0098772,GO:1900151,GO:1901363,GO:1903311,GO:1990841,GO:1990904,GO:2000112
Exons3
EggNOG free text desc.RNA binding
EggNOG OGsKOG0123@1,KOG0123@2759
Cds size435
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463901.2903414-CDS-Ecto-sp13_S_contig6534:6627..67451681463901.2903414-CDS-Ecto-sp13_S_contig6534:6627..6745Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6534 6628..6745 +
1681463901.3067405-CDS-Ecto-sp13_S_contig6534:7037..71831681463901.3067405-CDS-Ecto-sp13_S_contig6534:7037..7183Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6534 7038..7183 +
1681463901.3180966-CDS-Ecto-sp13_S_contig6534:7643..78141681463901.3180966-CDS-Ecto-sp13_S_contig6534:7643..7814Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6534 7644..7814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6534.17347.1prot_Ecto-sp13_S_contig6534.17347.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6534 6628..7814 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6534.17347.1

>prot_Ecto-sp13_S_contig6534.17347.1 ID=prot_Ecto-sp13_S_contig6534.17347.1|Name=mRNA_Ecto-sp13_S_contig6534.17347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=145bp
MFPFSVGQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFT
TIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNI
LSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVI
back to top

mRNA from alignment at Ecto-sp13_S_contig6534:6628..7814+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6534.17347.1 ID=mRNA_Ecto-sp13_S_contig6534.17347.1|Name=mRNA_Ecto-sp13_S_contig6534.17347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1187bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6534:6628..7814+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTCCGTTTTCTGTCGGGCAGGTCGGGCCGGTGGCCTCCATCCGCGT GTGCCGCGACACCGTCACCAGGCGCTCGCTGGGCTACGCCTACGTGAACT TCCACAACGTGGCCGACGGTGAGCCACGCATTACGCCTGAGTGAATGCTT CCCGTCATTTCAATGTGGTCGCGATCGTATGACAGCACCCCCCTCAGTGT TTTGCTGCGAGAGGAGTACACCATTCGCCTTCTTCTTGGTGCTGGTTTTG TACATGAAGAGCAAGAAGGGATGGGGCGTGCTCGCCTCTTTTCGTTGCCC ACCGAAAGTTTGATCAGATTGCGTGTACGTGTCTACCAGGTGCATCATGA CACATCGGTCGTTATTCATTTTTCTATCGTACGGCCCGGTGTTCGCCCAA TGCTGTACAGCCGAGCGCGCCCTAGACACGATGAACTTCACGACCATCAA GGACCAGGCGTGCCGCATCATGTGGTCCCAGCGCGACCCGTCCCTCCGCC GCTCCGGCGTCGGCAACATCTTCGTGAAGAACCTCGATGAAACCGTCGAC AACAAGGTGATAAGATACCCACTCCTTTATGAAATATGTTCTGTATGTGT CGATAGATAAAACGCTTGTTTGGGGTCTGGAACGGAGCACCGGTTGAAGG AGGCGCTAATTCGAGGCATGGCATTGTTGCACTTACGTGCCCGGATCTCA TTGTTGCTGCCCGTTCAGTCTTTGGTGTATGTGCGTGTTGTGTCATCATT CACTACTCTTGTTGTTGACAAGTGTTGGGTAAAATTGGTTCACCTTGCAC CTCGTATTCATGGCTGAGTCAAGACATGAAATTTGGGAGTATCACAACCA CCCCGCTAGCGTCTTGTCTTATCCGTCATTTGAAACCGAAGTCTTGGCTT CTTTTCATGATGCGCTGTCCGTGCCATACATCGTATCAACTCGATTCCGT GACGCCCCGTGCGCATCGCTTTTTTATTTTTTTTATCGTAACGCGCACGC TGTGGCGATGCTGCAGGCCCTGTACGACACGTTCTCCCTGTTTGGGAACA TCCTGTCGTGCAAAGTTGCCACCGACGATGCCGGCGAGAGCAAGGGCTAC GGCTACGTCCACTACGAGGGCGGGGTGTCGGCCAACATGGCCATCGCCAA GATCAATGGCATGCTCATCGCCGGGAAGCAGGTGATA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6534:6628..7814+

>mRNA_Ecto-sp13_S_contig6534.17347.1 ID=mRNA_Ecto-sp13_S_contig6534.17347.1|Name=mRNA_Ecto-sp13_S_contig6534.17347.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=435bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6534:6628..7814+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTCCGTTTTCTGTCGGGCAGGTCGGGCCGGTGGCCTCCATCCGCGT
GTGCCGCGACACCGTCACCAGGCGCTCGCTGGGCTACGCCTACGTGAACT
TCCACAACGTGGCCGACGCCGAGCGCGCCCTAGACACGATGAACTTCACG
ACCATCAAGGACCAGGCGTGCCGCATCATGTGGTCCCAGCGCGACCCGTC
CCTCCGCCGCTCCGGCGTCGGCAACATCTTCGTGAAGAACCTCGATGAAA
CCGTCGACAACAAGGCCCTGTACGACACGTTCTCCCTGTTTGGGAACATC
CTGTCGTGCAAAGTTGCCACCGACGATGCCGGCGAGAGCAAGGGCTACGG
CTACGTCCACTACGAGGGCGGGGTGTCGGCCAACATGGCCATCGCCAAGA
TCAATGGCATGCTCATCGCCGGGAAGCAGGTGATA
back to top