mRNA_Ecto-sp13_S_contig14844.3696.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig14844.3696.1
Unique NamemRNA_Ecto-sp13_S_contig14844.3696.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: A0A6H5KCY0_9PHAE (MMS19 nucleotide excision repair protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCY0_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 8.060e-138
Identity = 221/224 (98.66%), Postives = 223/224 (99.55%), Query Frame = 1 
Query:    1 RCLIVGLSALRKTQRGFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVLTGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA 672
            RCLIVGLSALRKTQ+GFDPAVLQET+EAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAV TGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA
Sbjct:  275 RCLIVGLSALRKTQQGFDPAVLQETAEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVFTGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA 498
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: D8LJJ0_ECTSI (MMS19 nucleotide excision repair protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ0_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 2.400e-130
Identity = 220/224 (98.21%), Postives = 221/224 (98.66%), Query Frame = 1 
Query:    1 RCLIVGLSALRKTQRGFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVLTGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA 672
            RCLIVGLSALRKTQ+GFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAV  GLGEACPEWRALA PLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA
Sbjct:  229 RCLIVGLSALRKTQQGFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVFAGLGEACPEWRALANPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA 452
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: K3WEQ0_GLOUD (MMS19 nucleotide excision repair protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEQ0_GLOUD)

HSP 1 Score: 97.4 bits (241), Expect = 4.050e-19
Identity = 75/225 (33.33%), Postives = 110/225 (48.89%), Query Frame = 1 
Query:    4 CLIVGLSALRKTQRGFD--PAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVLTGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA 672
            CL +    L K +  FD   AVLQ+     FD  +CYFP+TFTPPPNDP+ I+ + L   L      S  +A HVLP LL+KLSS V  AK  SL+ +V    A+      +H+ +I  A+  E V G   ++   +L +++         A     G A   W      L   A++++TG    S++   + +VL AL   S LG    L  +VP L++   E+
Sbjct:  202 CLQIARELLAKLEVVFDRHDAVLQQ----YFDVVSCYFPITFTPPPNDPYGITSEELILSLRKAFAASDLLAKHVLPFLLEKLSSTVVEAKLDSLQTLVFCCEAYSINVALLHMLSIANALYHEVVKGEKKEVIEASLRAISRF-SSVIGLAKTKAAGGAAYAWNKFVVELTTRAMSDLTGHATDSLVSVSAGQVLAALGKDSVLGFTHVLETSVPLLIQQFNES 421
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: W7U6Q4_9STRA (MMS19 nucleotide excision repair protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Q4_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.770e-19
Identity = 61/150 (40.67%), Postives = 85/150 (56.67%), Query Frame = 1 
Query:    1 RCLIVGLSALRKTQRGFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASH 450
            RCLI+ L+ + + Q  F PA      EA+FD TACYFP+TFTPPPNDP+ I+PD L   L   L   P MA  +LP+L+DKL+S    AK  +L  +    R  G   +  +L ++ GA+ +E V  ++  + A AL    E  R  A+H
Sbjct:  249 RCLILCLNIISRVQVIF-PAASDAHIEALFDITACYFPITFTPPPNDPYGITPDVLSHALREALTRRPSMAEFLLPLLVDKLTSTHVPAKLEALLTLQVATRTIGMRAMLGNLASVTGALFQEIVSCAEAPVVAAAL----ETCRSLAAH 393
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: A0A8K1CHX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHX8_PYTOL)

HSP 1 Score: 90.1 bits (222), Expect = 1.260e-16
Identity = 68/218 (31.19%), Postives = 104/218 (47.71%), Query Frame = 1 
Query:   19 LSALRKTQRGFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVLTGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA 672
            +S L       D A+LQ+     FD  +CYFP+TFTPPPNDP+ I+ + L T L      S  +A HVLP LL+KLSS V+ AK  S++ +V    A+      ++L  I  A+  E V G   ++   +L ++T         A    +G A   W      L + A  ++ G+   S+    + + L A+   SA      L  ++P LL   K++
Sbjct:  205 MSTLASVFEKHDTAILQQ----YFDVVSCYFPITFTPPPNDPYGITSEDLITSLRKAFAASDLLARHVLPFLLEKLSSTVTEAKLDSIQTLVFCCEAYSINVTLLYLHTIATALYHEVVKGEKKEVIEASLKAITRFA-SLIGLAKTKSVGGAAYAWTKFVLELTKRATDDLRGNAVDSLASASAGQALAAIGKESAPAFTHVLEASIPLLLEQFKDS 417
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: A0A5D6XS49_9STRA (MMS19 nucleotide excision repair protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS49_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.310e-16
Identity = 63/195 (32.31%), Postives = 95/195 (48.72%), Query Frame = 1 
Query:   88 FDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVLTGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLLRARKEA 672
            FD  +CYFP+TFTPPPNDP+ I+ + L   L      S  +A H +P LL+KL+S V  AK  +L+ +V    A+    + +H+  +  A+  E V G   ++   AL ++          A     G A   W      L   A +++ G    S++   + RVL AL   SALG    L  AVP L++  +E+
Sbjct:  230 FDVVSCYFPITFTPPPNDPYGITSEELIGSLRRAFAASDLLAKHAVPFLLEKLASTVVEAKLDALQTLVFCCEAYAVNALLLHMVPVANALYHEVVKGERKEVIEAALGAIARFAG-VVGRAKTRAAGGAAYAWSKFVVELTARATSDLAGHAADSMVSVSAGRVLAALGRDSALGFAHVLDAAVPLLVQQFRES 423
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: A0A316YNL1_9BASI (MMS19 nucleotide excision repair protein n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YNL1_9BASI)

HSP 1 Score: 88.2 bits (217), Expect = 5.980e-16
Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 1 
Query:   49 FDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLA---ALALLSLTEVV 432
            +D  +  E +EA FD T CYFP+TF PPP+DP+ IS + LR  L  VL+ SP +APH +P+LL+KL +    AK  +L  +   +  FG      H   +  A   E +H +D   A   A AL SL +V+
Sbjct:  209 WDDIMDSELTEAFFDTTYCYFPITFRPPPDDPYGISTNTLRLSLRKVLIASPLLAPHAMPLLLEKLQASGGNAKRDTLDTLKEALPVFGRAAAKAHESPLWEAFKIEIMHATDDATAICSARALESLLQVL 339
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: A0A5B7D836_PORTR (MMS19 nucleotide excision repair protein n=2 Tax=Portunus trituberculatus TaxID=210409 RepID=A0A5B7D836_PORTR)

HSP 1 Score: 87.8 bits (216), Expect = 7.250e-16
Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 1 
Query:   64 LQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVLTGLGEACPEWRALAKPLLEGAVAE 531
            L+   E +F+  A YFP+ F PP  DP+ I  + L  GL GVL  +P  AP  LP+L +KL S++++AK  SL  +VA    + A  +  H+R++  ++  E + G++ D+   AL +LT VVR       +  +G      RA A  L+E A+AE
Sbjct:  201 LEPFVEELFEVVAAYFPIEFVPPRGDPYAIQVEDLVLGLRGVLASTPLFAPFCLPLLQEKLDSDLTSAKLDSLHTLVACCEVYSAEAIHPHIRSLWDSLCREVMEGANKDVEEAALSALTAVVR-------VLEVGITTAASRAAAATLIEAAIAE 349
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: A0A067CGL0_SAPPC (MMS19 nucleotide excision repair protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGL0_SAPPC)

HSP 1 Score: 87.8 bits (216), Expect = 7.580e-16
Identity = 61/196 (31.12%), Postives = 100/196 (51.02%), Query Frame = 1 
Query:   70 ETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLS-SEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAVLTGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAASSALGLRSALALAVPRLL 654
            + ++  FDAT+CYFP+TF PPPNDP+ I+ + L   L  V VG   +A HVLPM+LDKLS + V    +  L+ +      +    + +H   +  A+    +HG +  + A+A+ +L  + R  +  + L G+      W      L+  AV ++    P S++  G+  VL A+A+    G    L+ A+  LL
Sbjct:  209 DVAKGFFDATSCYFPITFRPPPNDPYGITSEDLVLALRSVFVGHDSLAKHVLPMVLDKLSRTTVVEMTKDILETLAFCCAKYPLNRLLLHFTPVAAAVYHHVLHGDNTAVIAVAIDALKTITRAVSPPSKLPGMQALA--WNKCIVYLVNQAVEDLAHQAPDSMVSTGAGHVLCAIASVGVAGFSHVLSSALALLL 402
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BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Match: A0A6P5AMX8_BRABE (MMS19 nucleotide excision repair protein n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AMX8_BRABE)

HSP 1 Score: 87.8 bits (216), Expect = 7.600e-16
Identity = 60/152 (39.47%), Postives = 82/152 (53.95%), Query Frame = 1 
Query:    1 RCLIVGLSALRKTQRGFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHNISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAGVRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASHAV 456
            R LI+  S  R   + F        +E  F+  ACYFP+ FTPP +DPH ++ + L  GL  VL  +   A   LPMLL+KLSS+V++AK  SL  + A    +GA G+   L  +  A+S+E  +    D+   AL  LT VV  T SHAV
Sbjct:  181 RNLIIAFSIARIIAQSFPIGTF---TEEFFEVVACYFPIDFTPPADDPHGVTREDLVLGLRQVLAATHQFAQFCLPMLLEKLSSDVTSAKLDSLHTLAACAEVYGADGLKSFLDLLLSAISKEVYNSIHQDIENAALTGLTAVVA-TLSHAV 328
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig14844.3696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCY0_9PHAE8.060e-13898.66MMS19 nucleotide excision repair protein (Fragment... [more]
D8LJJ0_ECTSI2.400e-13098.21MMS19 nucleotide excision repair protein n=1 Tax=E... [more]
K3WEQ0_GLOUD4.050e-1933.33MMS19 nucleotide excision repair protein n=1 Tax=G... [more]
W7U6Q4_9STRA7.770e-1940.67MMS19 nucleotide excision repair protein n=2 Tax=M... [more]
A0A8K1CHX8_PYTOL1.260e-1631.19Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XS49_9STRA2.310e-1632.31MMS19 nucleotide excision repair protein n=1 Tax=P... [more]
A0A316YNL1_9BASI5.980e-1639.69MMS19 nucleotide excision repair protein n=1 Tax=A... [more]
A0A5B7D836_PORTR7.250e-1635.90MMS19 nucleotide excision repair protein n=2 Tax=P... [more]
A0A067CGL0_SAPPC7.580e-1631.12MMS19 nucleotide excision repair protein n=2 Tax=S... [more]
A0A6P5AMX8_BRABE7.600e-1639.47MMS19 nucleotide excision repair protein n=1 Tax=B... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig14844contigEcto-sp13_S_contig14844:1669..4152 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score413.7
Seed ortholog evalue6.7e-113
Seed eggNOG ortholog2880.D8LJJ0
Preferred nameMMS19
Model size819
KEGG koko:K15075
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000160,GO:0000228,GO:0000428,GO:0000775,GO:0000785,GO:0000790,GO:0000792,GO:0003674,GO:0003712,GO:0003713,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005675,GO:0005694,GO:0005720,GO:0005721,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006289,GO:0006351,GO:0006355,GO:0006725,GO:0006790,GO:0006807,GO:0006950,GO:0006974,GO:0007059,GO:0007154,GO:0007165,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010569,GO:0010604,GO:0010628,GO:0015630,GO:0016043,GO:0016070,GO:0016226,GO:0016591,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019899,GO:0022607,GO:0023052,GO:0030159,GO:0030331,GO:0030674,GO:0030880,GO:0031163,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031618,GO:0031974,GO:0031981,GO:0032774,GO:0032806,GO:0032947,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0035258,GO:0035556,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044798,GO:0045739,GO:0045893,GO:0045911,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051186,GO:0051252,GO:0051254,GO:0051427,GO:0051604,GO:0051716,GO:0055029,GO:0060090,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0071817,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090575,GO:0097361,GO:0097428,GO:0097659,GO:0098687,GO:0106035,GO:0140110,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902494,GO:1902554,GO:1902680,GO:1902911,GO:1903506,GO:1903508,GO:1905168,GO:1990234,GO:2000112,GO:2000779,GO:2000781,GO:2001020,GO:2001022,GO:2001141
Exons4
EggNOG free text desc.positive regulation of double-strand break repair via homologous recombination
EggNOG OGsKOG1967@1,KOG1967@2759
Cds size819
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462792.2477064-CDS-Ecto-sp13_S_contig14844:1668..18991681462792.2477064-CDS-Ecto-sp13_S_contig14844:1668..1899Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14844 1669..1899 -
1681462792.2634594-CDS-Ecto-sp13_S_contig14844:2447..26661681462792.2634594-CDS-Ecto-sp13_S_contig14844:2447..2666Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14844 2448..2666 -
1681462792.2734828-CDS-Ecto-sp13_S_contig14844:3296..34901681462792.2734828-CDS-Ecto-sp13_S_contig14844:3296..3490Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14844 3297..3490 -
1681462792.282507-CDS-Ecto-sp13_S_contig14844:3977..41521681462792.282507-CDS-Ecto-sp13_S_contig14844:3977..4152Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig14844 3978..4152 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig14844.3696.1prot_Ecto-sp13_S_contig14844.3696.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig14844 1669..4152 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig14844.3696.1

>prot_Ecto-sp13_S_contig14844.3696.1 ID=prot_Ecto-sp13_S_contig14844.3696.1|Name=mRNA_Ecto-sp13_S_contig14844.3696.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=273bp
RCLIVGLSALRKTQRGFDPAVLQETSEAVFDATACYFPVTFTPPPNDPHN
ISPDALRTGLEGVLVGSPGMAPHVLPMLLDKLSSEVSTAKEASLKAMVAG
VRAFGAPGVGVHLRAIGGAMSEEAVHGSDPDLAALALLSLTEVVRETASH
AVLTGLGEACPEWRALAKPLLEGAVAEVTGDQPCSVLGRGSARVLLALAA
SSALGLRSALALAVPRLLRARKEAAAAAAAMKRDVSALEGGLTSGCCGGG
GGATAGGGGCCGGGGGGHKDAMV
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mRNA from alignment at Ecto-sp13_S_contig14844:1669..4152-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig14844.3696.1 ID=mRNA_Ecto-sp13_S_contig14844.3696.1|Name=mRNA_Ecto-sp13_S_contig14844.3696.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2484bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14844:1669..4152- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTGTTTGATCGTCGGCCTGTCGGCACTCCGTAAGACCCAGCGGGGCTT
CGACCCTGCGGTGTTGCAGGAGACCTCCGAGGCGGTGTTTGACGCGACGG
CGTGCTACTTCCCCGTTACCTTCACGCCTCCGCCCAACGACCCCCACAAC
ATAAGCCCGGACGCGCTTCGAACAGGTTCGTCTGCTTAGTTTCGGGTGAT
GGTGGTTGTCCGGACGCTCGCAGAACAGTTTTATTTGGTGTTGTCGACGT
CGTCTGGTGTTGGGGTCGTTGTTGTTGCTGTTGTTGTTATCGTTGTTGTT
GTGTTGTTGTGTTGTTGTTGTTGTTGCTGTTGCTGTTGTTGTTGTGTTGT
TGTTGTGTTGTTGTTGTTGTTGTTGCTGTTGCTGCCGCTGCTGCCGCTGC
TGCTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTATTGTTGCTGTTGCTGTTGTTCTTGTTCTTGTTGCT
GCTGCTGCTGCTGCTGCTGCTGTTAATCTTGAGTGTAGTCGTGGTTGGTG
CTTCCTCTGCTTCCTCTTCTTCTTCATCTTGCGTCCGCACCAACAACTGT
TCCGTGTGGCACAACCACAAAACAAAACACCCACATCCTGATAACAAAAA
AAACGATTCCAGGCCTGGAAGGCGTTCTCGTCGGATCCCCGGGGATGGCG
CCGCACGTCCTGCCCATGCTCCTGGACAAGCTTTCTTCCGAGGTTTCCAC
CGCCAAGGAAGCCTCCCTCAAGGCCATGGTGGCCGGGGTGAGGGCCTTCG
GAGCCCCGGGGGTGGGGGTTCATCTCCGCGCGATCGGGGGAGCCATGTCT
GAAGAGGTGAGACACTCTACATAGTCTTTTGCGGGGGGAATTTTTGTCCG
ATAATTTCGTGGAAGTGCTCGTGCGCATGTGTCTGGACCCTTGGTCGGTC
GATGACGTTCTCGGGTCTCTTTGCGGGTTAGTTCCTTTAAACCGGCACTT
GAAGGCCGAGGTCCCGATGCGGTGGTGCGTGCTTTGTTTGTTGCGCGTCT
ACGCTTGGTTTTTTGTTTGGTGTCGTGGTTTTTGCTGTTAACTCAACCTC
CCGACCCATCATCGAATTATTGCGCACACCCAATGTCAGGTATGCCTGCT
TTCTTTGACCTGGAGGAACTCAATCGCGGACCTGAAATTATGCAGACCCC
GGTGTCGTCATTACCCTTCGGCCTCGCTCGATCTTCTTTGCCCAGGCGAT
ACACCATGCTCCGTCCTCTCGAGGTCAATAGTTAATCAAACAGCTAAGGC
CTATCACAGCTATGGCATGCGAAACATGAGTACCCCCCCTCCCTTGATGA
TGTGAGAGCCTGGTCCGGTGAGAACCCGCCGTTCTTCGTCCCGGCTTTGT
AGGGATGCGAGGTCAATGGTCTAACAACTGCGGCATGCACAGCTATGAGT
GTCACCACCCTTCCTCCTCCTGTGTGCCCCCTCCAGGCGGTACACGGCTC
CGACCCCGACCTGGCGGCGCTGGCGCTCTTGTCCCTCACGGAAGTGGTCC
GAGAGACGGCGTCTCACGCGGTGTTAACCGGTCTTGGGGAGGCATGTCCG
GAGTGGAGGGCCCTGGCGAAGCCCCTTCTCGAAGGGGCCGTCGCGGAAGT
GACGGGGGATCAGCCATGCTCGGTGCTGGGAAGGGGCTCTGCGAGGGTAT
TGCTGGTGAGGAGGGGGGAGGGGGGGGGGCGAGGGGGGCGTAATCATGTT
TTTAATGTTTTGGCGGAGCATGCGGATGCGGTGGGTGGGGGGAGGTTGTT
GATTTTTCCTTGTCTTGAGCTAAAGGAGGTTGACTGCACGTACCGATTGA
GAAAAGGCGTGCCGTTTCTTGTAGAAAAGTAAGGGGATGGGGTGCTGCTG
CTGTCGTTCTTTTGTCTGCGCCACAGTGGAGCGTGCAGGTCGCTTGTGGT
TTTGCCTCGTTTCTTGCATTATCGGCAGTTTCTCGGCTCCTTTGAGGGTG
TGCGTGCATGTTTTCCAGAGGACGACGACTTGGTGTCCTAGTATCGCGCG
AACCCAGTCTCCGTTATGATTTGAGCAAAGATCCCGGGCACAGGGAACGC
TGCCATGTCCCATTCGATCACCAACAAAACCTTTCCCCCGCACAACACCG
GGCTGTTGCATGTCTCGTGAGTTTCATCGGAATCGCAACGTGTTCGGAGC
TGCGTTAGAAGCTTGAGTCCTGCCCCCCCCCCCCCCTTTGCCCCCTCTCT
TAGGCCCTCGCAGCATCGTCTGCTCTGGGCCTTCGTTCGGCGTTAGCGCT
AGCAGTGCCCCGGCTGCTTCGTGCTCGCAAAGAAGCTGCGGCGGCGGCGG
CAGCCATGAAGAGGGACGTTTCTGCTCTGGAAGGGGGGTTGACTAGCGGC
TGTTGTGGCGGCGGAGGCGGAGCGACGGCAGGTGGAGGGGGCTGCTGCGG
CGGCGGTGGAGGGGGGCACAAAGATGCGATGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig14844:1669..4152-

>mRNA_Ecto-sp13_S_contig14844.3696.1 ID=mRNA_Ecto-sp13_S_contig14844.3696.1|Name=mRNA_Ecto-sp13_S_contig14844.3696.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=819bp|location=Sequence derived from alignment at Ecto-sp13_S_contig14844:1669..4152- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGTGTTTGATCGTCGGCCTGTCGGCACTCCGTAAGACCCAGCGGGGCTT
CGACCCTGCGGTGTTGCAGGAGACCTCCGAGGCGGTGTTTGACGCGACGG
CGTGCTACTTCCCCGTTACCTTCACGCCTCCGCCCAACGACCCCCACAAC
ATAAGCCCGGACGCGCTTCGAACAGGCCTGGAAGGCGTTCTCGTCGGATC
CCCGGGGATGGCGCCGCACGTCCTGCCCATGCTCCTGGACAAGCTTTCTT
CCGAGGTTTCCACCGCCAAGGAAGCCTCCCTCAAGGCCATGGTGGCCGGG
GTGAGGGCCTTCGGAGCCCCGGGGGTGGGGGTTCATCTCCGCGCGATCGG
GGGAGCCATGTCTGAAGAGGCGGTACACGGCTCCGACCCCGACCTGGCGG
CGCTGGCGCTCTTGTCCCTCACGGAAGTGGTCCGAGAGACGGCGTCTCAC
GCGGTGTTAACCGGTCTTGGGGAGGCATGTCCGGAGTGGAGGGCCCTGGC
GAAGCCCCTTCTCGAAGGGGCCGTCGCGGAAGTGACGGGGGATCAGCCAT
GCTCGGTGCTGGGAAGGGGCTCTGCGAGGGTATTGCTGGCCCTCGCAGCA
TCGTCTGCTCTGGGCCTTCGTTCGGCGTTAGCGCTAGCAGTGCCCCGGCT
GCTTCGTGCTCGCAAAGAAGCTGCGGCGGCGGCGGCAGCCATGAAGAGGG
ACGTTTCTGCTCTGGAAGGGGGGTTGACTAGCGGCTGTTGTGGCGGCGGA
GGCGGAGCGACGGCAGGTGGAGGGGGCTGCTGCGGCGGCGGTGGAGGGGG
GCACAAAGATGCGATGGTG
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