mRNA_Ecto-sp13_S_contig10801.724.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: A0A6H5KI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI11_9PHAE) HSP 1 Score: 353 bits (907), Expect = 2.260e-115 Identity = 235/242 (97.11%), Postives = 236/242 (97.52%), Query Frame = 1
Query: 1 QANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMXXXXXXXXXXXXPGSMXXXXXXXXGMXXXXXXSXGMXXXXXXXXXXXXXXXXXXXXXXRGGGGMPRGMPXXXXXXYGRGYPHHMAPQHMMPHGRMGPNMGMPMGMQ 726
+ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMXXXXXXXXXXXXPGSMXXXXXXXXGMXXXXXXSXGMXXXXXXXXXXXXXXXXXXXXXXRGGGGMPR XXXXX YGRGYP HMAPQHMMPHG MGPNMGMPMGMQ
Sbjct: 93 KANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMXXXXXXXXXXXXPGSMXXXXXXXXGMXXXXXXSXGMXXXXXXXXXXXXXXXXXXXXXXRGGGGMPRXXXXXXXXGYGRGYPQHMAPQHMMPHGGMGPNMGMPMGMQ 334
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: D8LT41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT41_ECTSI) HSP 1 Score: 322 bits (824), Expect = 4.060e-101 Identity = 192/250 (76.80%), Postives = 193/250 (77.20%), Query Frame = 1
Query: 1 QANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGMXXXXXXXXXXXXPGSMXXXXXXXXGMXXXXXXSXGMXXXXXXXXXXXXXXXXXXXXXXRGGGGMPRGMPXXXXXXYGRGYPHHMAPQHMMPHGRMGPNMGMPMGMQRGGGGYNM 750
+ANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM GM XXXXXXXXXXXX RGG MPRGM XXXXXX HMAPQHMMPH M PNMGMPMGMQRGGGGYNM
Sbjct: 93 KANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGGNGGM----------------------------------GMGXXXXXXXXXXXX---------RGGXXMPRGMXXXXXXXXXXXXXQHMAPQHMMPHVGMRPNMGMPMGMQRGGGGYNM 299
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: A0A835YPU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU5_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.690e-57 Identity = 94/125 (75.20%), Postives = 110/125 (88.00%), Query Frame = 1
Query: 1 QANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEG 375
+A DVGANLFIGQLDP+VDEK+LYDTFSAFGFIT TPKVMRDP+TG SKGYGFVSYDGFEASD AIECM+ Q+LCNRQI VQYA+K+D+ GERHG AERLLA+NNP + K HT+F+ G+++G
Sbjct: 93 KAQDVGANLFIGQLDPEVDEKLLYDTFSAFGFITNTPKVMRDPETGASKGYGFVSYDGFEASDLAIECMNGQFLCNRQIVVQYAFKRDSHGERHGSLAERLLAANNPLRLKPHTMFASQEGEVQG 217
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: F0YAQ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAQ8_AURAN) HSP 1 Score: 192 bits (489), Expect = 1.410e-53 Identity = 88/127 (69.29%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 10 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAA 390
+VGANLF+G LD DVDEK+LYDTFSAFG IT+TPK+MRDPDTG SKG+GFVSYD FEASD AIECMHNQ+LCN+Q+ V YA+K+D++ ERHG QAERLLA+NNP K H +F PG G AA
Sbjct: 97 EVGANLFVGGLDVDVDEKLLYDTFSAFGTITETPKIMRDPDTGNSKGFGFVSYDSFEASDLAIECMHNQFLCNKQVQVGYAFKRDSKTERHGSQAERLLAANNPMSAKPHAMFGTGPGDAMGGGYAA 223
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: A0A0W8D7L6_PHYNI (Splicing factor 3B subunit 4 n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8D7L6_PHYNI) HSP 1 Score: 190 bits (482), Expect = 1.600e-53 Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 1
Query: 10 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEG 375
DVGANLFIG LDP+VDEK+LYDTFSAFG I +TPK+MRDPDT SKG+GFVS+D FEA+D AIECMH QYLCNRQ+ VQYA+KKD+ ERHG +AERLLA NP+K K HT+F+ G G
Sbjct: 96 DVGANLFIGNLDPEVDEKLLYDTFSAFGGIVETPKIMRDPDTKASKGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQYAFKKDSHNERHGSEAERLLAQRNPNKLKPHTMFAFTAGAAPG 217
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: A0A2H5NRF6_CITUN (Uncharacterized protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5NRF6_CITUN) HSP 1 Score: 190 bits (483), Expect = 2.040e-53 Identity = 91/134 (67.91%), Postives = 106/134 (79.10%), Query Frame = 1
Query: 10 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPS--KFKVHTLFSVAPGKIEGSAPAAGGNGG 405
DVGANLFIG LDPDVDEK+LYDTFSAFG I PK+MRDPDTG S+G+GF+SYD FEASD AIE M+ QYLCNRQI+V YAYKKDT+GERHG AER+LA+NNPS K + HTLF+ P ++ + G GG
Sbjct: 109 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQVNGTVGG 242
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: A0A6G0WNH8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNH8_9STRA) HSP 1 Score: 188 bits (478), Expect = 4.640e-53 Identity = 89/129 (68.99%), Postives = 104/129 (80.62%), Query Frame = 1
Query: 10 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPGKIEGSAPAAGG 396
D+GANLF+G LDPDVDEK+LYDTFSAFG I +TPK+MRDPDT +S+G+GFVSYD FEA+D AIECM+ QYLCNRQI VQYAYKK + ERHG QAERLLAS+NP+K K HT F+ + I P A G
Sbjct: 99 DIGANLFLGNLDPDVDEKLLYDTFSAFGGIVETPKIMRDPDTKVSRGFGFVSYDSFEAADLAIECMNAQYLCNRQIVVQYAYKKGSNNERHGSQAERLLASSNPNKMKPHTRFAFSTPAIPQPPPMAMG 227
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: W4GDM5_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=W4GDM5_9STRA) HSP 1 Score: 190 bits (482), Expect = 5.050e-53 Identity = 87/116 (75.00%), Postives = 100/116 (86.21%), Query Frame = 1
Query: 10 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVA 357
D+GANLF+G LDPDVDEK+LYDTFSAFG I +TPK+MRDPDT MS+G+GFVSYD FEA+D AIECM+ QYLCNRQI VQYAYKK + ERHG QAERLLAS+NP+K K HT F+ A
Sbjct: 98 DIGANLFLGNLDPDVDEKLLYDTFSAFGGIVETPKIMRDPDTKMSRGFGFVSYDSFEAADLAIECMNTQYLCNRQIVVQYAYKKGSNNERHGSQAERLLASSNPNKLKPHTRFAFA 213
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: A0A067GIM3_CITSI (Uncharacterized protein n=4 Tax=Citrus TaxID=2706 RepID=A0A067GIM3_CITSI) HSP 1 Score: 192 bits (487), Expect = 5.590e-53 Identity = 92/134 (68.66%), Postives = 107/134 (79.85%), Query Frame = 1
Query: 10 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPS--KFKVHTLFSVAPGKIEGSAPAAGGNGG 405
DVGANLFIG LDPDVDEK+LYDTFSAFG I PK+MRDPDTG S+G+GF+SYD FEASD AIE M+ QYLCNRQI+V YAYKKDT+GERHG AER+LA+NNPS K + HTLF+ P ++ + A G GG
Sbjct: 109 DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERILAANNPSSQKSRPHTLFASGPPSLQNAPQANGTVGG 242
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Match: A0A6A4C3Q0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4C3Q0_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.320e-52 Identity = 83/118 (70.34%), Postives = 100/118 (84.75%), Query Frame = 1
Query: 10 DVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGYGFVSYDGFEASDKAIECMHNQYLCNRQISVQYAYKKDTRGERHGGQAERLLASNNPSKFKVHTLFSVAPG 363
DVGANLF+G LDP+VDEK+LYDTFSAFG I +TPKVMRDPD+ S+G+GFVS+D FEA+D AIECMH QYLCNRQ+ VQ+A+KKD+R ERHG +AERLLA NP K + HT+F+ PG
Sbjct: 96 DVGANLFLGNLDPEVDEKLLYDTFSAFGGIVETPKVMRDPDSQASRGFGFVSFDSFEAADLAIECMHGQYLCNRQVVVQFAFKKDSRNERHGSEAERLLAQRNPDKLQPHTMFAFTPG 213 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10801.724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10801.724.1 >prot_Ecto-sp13_S_contig10801.724.1 ID=prot_Ecto-sp13_S_contig10801.724.1|Name=mRNA_Ecto-sp13_S_contig10801.724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=474bp QANDVGANLFIGQLDPDVDEKMLYDTFSAFGFITQTPKVMRDPDTGMSKGback to top mRNA from alignment at Ecto-sp13_S_contig10801:453..5126- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10801.724.1 ID=mRNA_Ecto-sp13_S_contig10801.724.1|Name=mRNA_Ecto-sp13_S_contig10801.724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4674bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10801:453..5126- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10801:453..5126- >mRNA_Ecto-sp13_S_contig10801.724.1 ID=mRNA_Ecto-sp13_S_contig10801.724.1|Name=mRNA_Ecto-sp13_S_contig10801.724.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1422bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10801:453..5126- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |