Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
D7G0U6_ECTSI (DUSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U6_ECTSI)
HSP 1 Score: 468 bits (1203), Expect = 1.130e-158
Identity = 229/233 (98.28%), Postives = 232/233 (99.57%), Query Frame = 1
Query: 241 NGDGGDELGAGRASYGDDLDTLDRRRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYEAEVPLKYRREICEEPMRRAQVEVQKMRWRVEPEEARPPDKPQLCCCITERVIDCVFMSLFTCCSKWRRRCPWXXXXXXNAICPGRTSAAGGRYSRVTTGEDGEED 939
NGDG DELGAGRASYGDDLDTLDRRRTEEL+LIGEFDSANINPRRECWFIVDTKWLQ+WAKFVRGEGPPPGRISN+GLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYEAEVPLKYRREICEEPMRRAQVEVQKMRWRVEPEEARPPDKPQLCCCITERVIDCVFMSLFTCCSKWRRRCPWXXXXXXNAICPGRTSAAGGRYSRVTTGEDGEED
Sbjct: 55 NGDGEDELGAGRASYGDDLDTLDRRRTEELRLIGEFDSANINPRRECWFIVDTKWLQTWAKFVRGEGPPPGRISNKGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYEAEVPLKYRREICEEPMRRAQVEVQKMRWRVEPEEARPPDKPQLCCCITERVIDCVFMSLFTCCSKWRRRCPWXXXXXXNAICPGRTSAAGGRYSRVTTGEDGEED 287
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
A0A6U1BH02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BH02_9STRA)
HSP 1 Score: 166 bits (421), Expect = 4.680e-43
Identity = 82/196 (41.84%), Postives = 124/196 (63.27%), Query Frame = 1
Query: 256 DELGAGRASYGDDLDTLDRRRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYEAEVPLKYRREICEEPMRRAQVEVQKMRWRVEPE--EARPPDKPQLCCCITERVIDCVFMSLFTCCSKWRRRCP 837
D+LGA ++L+ L+ RR+ EL L+ +FD INPRRECWF++DT W++ W+ ++ G+ PGRISN L + D +T LV + DYRG++P +W++++E+YGKD+A +LCRY +D+Y V KYR + + +A+VEV MR PE E D+P +CCC+ +R + C FTCC+ +R P
Sbjct: 28 DDLGA---LTPEELELLEERRSAELALVSKFDKTEINPRRECWFLIDTTWIRDWSLYMEGKRDSPGRISNLNLFEADERTVKRKLVPKQDYRGLSPLMWYIFVELYGKDAAPELCRYSLDIYAPGVAGKYREQASKGAALQARVEVSNMREEFIPESDEESVDDEP-VCCCVYQRQLQCFLFHTFTCCAHLGKRGP 219
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
A0A7R9U3S0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3S0_9STRA)
HSP 1 Score: 128 bits (321), Expect = 7.390e-30
Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 1
Query: 292 DLDTLDRRRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYEAEVPLKYRREICEEPMRRAQVEVQKMRWRVEPEEARPPDKPQ------LCCCITERVIDCVFMSLFTC 810
D+D+ + RR +E++L+ E DS ++ +CW ++ T WLQ W+ +V GEGP PG + N L++ D +P GLV DYR VN V+ LY E+YG D +CRY +DLY V K++ P+ A++ Q++R R E PP +P CCC+T I+ + ++FTC
Sbjct: 34 DIDS-EERRMDEMELVREADSTQLDAYEDCWVLLPTSWLQEWSAYVAGEGPRPGVVRNHELLELD-NSPKPGLVKVRDYRAVNCRVYALYAELYGTDCTPAVCRYEVDLYAPSVMGKFKEAALRGPLLEARIAAQEVRKRYE----YPPSEPDSDTDVICCCCVTRTCIENMLYAIFTC 206
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
A0A7S3M225_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M225_9STRA)
HSP 1 Score: 114 bits (284), Expect = 1.540e-23
Identity = 70/181 (38.67%), Postives = 106/181 (58.56%), Query Frame = 1
Query: 313 RRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRG-EGPP-PGRISNRGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYEAEVPLKYRREICEEPMRRAQVEVQKMRWRVE------PEEARPPDKPQ-LCCCITERVIDCVFMSLFTCCSKWRR 828
R+ +ELKL+ +FD + IN +ECWF+VD+ WL W+ FV G +G PG +S + L+ D P+ L+ DYRGV P V+F++LE+YGKDS+ +LCRY ID+Y++ P+ + + + RAQ ++Q R R + EE D+P CC +T+ ++ TC S RR
Sbjct: 41 RKKQELKLVKKFDKSAINVAKECWFLVDSDWLNKWSAFVNGGDGEDSPGPLSTKELL-DAQDIPLLNLMPIRDYRGVPPIVYFIFLELYGKDSSPELCRYQIDIYKS--PVSVAKLVNIQLTGRAQAKIQVNRVRPKWLKWDRGEEDEGEDQPLGWCCGLTKEHLEAFIYWAITCWSNRRR 218
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
A0A6H5L668_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L668_9PHAE)
HSP 1 Score: 95.9 bits (237), Expect = 4.710e-20
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 1
Query: 472 LVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCR 603
LVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCR
Sbjct: 30 LVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCR 73
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
A0A6G0XFM4_9STRA (DUSP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFM4_9STRA)
HSP 1 Score: 100 bits (248), Expect = 6.160e-18
Identity = 49/144 (34.03%), Postives = 79/144 (54.86%), Query Frame = 1
Query: 307 DRRRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVKD------------DLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYEAEVPLKYRREICEEPMRRAQVEVQKM 702
+RRR EEL + + ++ +I+ R +CWF++D +W+ W K+ +GPPPG ISN G+V++ D P + L VDY V P VW + +E++G + RY D+Y +P R +I + P+ +A V V+ M
Sbjct: 6 ERRRKEELFFVQQHEATSIS-RGQCWFMLDAQWMDRWWKYATNDGPPPGPISNEGIVQEGWELRLHGDAPGDADLPRENLQLSVDYHCVTPLVWCVLVELHGSSRMPPMARYTKDIYSTPLPAVAREKILKTPLMQADVLVKTM 148
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
C5K6W1_PERM5 (DUSP domain-containing protein (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5K6W1_PERM5)
HSP 1 Score: 83.2 bits (204), Expect = 1.860e-13
Identity = 41/112 (36.61%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 289 DDLDTLDRRRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYE 624
D +TL R E + + +FD+ + P + ++IV TKW+ SW +F+ E PG ISN L DDLKT + V DYRG+N +W +L YG + R+ +D+Y+
Sbjct: 91 DTEETLRLRARYEAEFVRKFDTVRLPPG-DIYYIVSTKWIDSWKRFISEEKELPGPISNNLLFHDDLKTLLPRFVRSKDYRGINQRIWSFWLARYGGGPL--ITRFTLDIYD 199
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
A0A662YFZ9_9STRA (DUSP domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFZ9_9STRA)
HSP 1 Score: 84.7 bits (208), Expect = 1.890e-13
Identity = 48/120 (40.00%), Postives = 61/120 (50.83%), Query Frame = 1
Query: 295 LDTLDRRRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVK--------DDLKTPVD----GLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDL 618
L+ D RR ELKLI FD + +ECWF+V+T W+ W FV GP PG ISN L++ DD D GL DYR V P VW L + ++G A L RY +D+
Sbjct: 442 LEDADLRRRLELKLIMSFDRKELK-FKECWFVVNTAWMNRWVLFVGKGGPEPGPISNDELLQPGWETHLSDDTPGRADVVRSGLQLTKDYRCVAPLVWSLLVALHGSGKAPTLARYALDI 560
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
A0A662Y400_9STRA (DUSP domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y400_9STRA)
HSP 1 Score: 84.3 bits (207), Expect = 2.230e-13
Identity = 48/120 (40.00%), Postives = 61/120 (50.83%), Query Frame = 1
Query: 295 LDTLDRRRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVK--------DDLKTPVD----GLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDL 618
L+ D RR ELKLI FD + +ECWF+V+T W+ W FV GP PG ISN L++ DD D GL DYR V P VW L + ++G A L RY +D+
Sbjct: 396 LEDADLRRRLELKLIMSFDRKELK-FKECWFVVNTAWMNRWVLFVGKGGPEPGPISNDELLQPGWEAHLSDDTPGCADVVRSGLQLAKDYRCVAPLVWSLLVALHGSGEAPTLARYALDI 514
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Match:
A0A7J6S9E6_PEROL (Uncharacterized protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6S9E6_PEROL)
HSP 1 Score: 79.0 bits (193), Expect = 1.070e-11
Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 289 DDLDTLDRRRTEELKLIGEFDSANINPRRECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVKDDLKTPVDGLVSRVDYRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYE 624
D ++L R E + + ++D+ + P+ + ++IV TKW+ SW F+ PG ISN L +DDLKT + LV DYRG+N +W +L YG + R +D+Y+
Sbjct: 82 DTQESLRLRARYEAEFVRKYDTVRL-PQGDTYYIVSTKWINSWKHFISEGKGLPGPISNNVLFRDDLKTLLPRLVRSRDYRGINQTIWSFWLARYGGGPL--VTRLTLDIYD 190
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10.50.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 13
0 1 Expect = 1.13e-158 / Id = 98.28 Expect = 4.68e-43 / Id = 41.84 Expect = 7.39e-30 / Id = 37.43 Expect = 1.54e-23 / Id = 38.67 Expect = 4.71e-20 / Id = 100.00 Expect = 6.16e-18 / Id = 34.03 Expect = 1.86e-13 / Id = 36.61 Expect = 1.89e-13 / Id = 40.00 Expect = 2.23e-13 / Id = 40.00 Expect = 1.07e-11 / Id = 34.82 Sequence D7G0U6_ECTSI A0A6U1BH02_9STRA A0A7R9U3S0_9STRA A0A7S3M225_9STRA A0A6H5L668_9PHAE A0A6G0XFM4_9STRA C5K6W1_PERM5 A0A662YFZ9_9STRA A0A662Y400_9STRA A0A7J6S9E6_PEROL
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10.50.1
>prot_E-siliculosus-1a_F_contig10.50.1 ID=prot_E-siliculosus-1a_F_contig10.50.1|Name=mRNA_E-siliculosus-1a_F_contig10.50.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=332bp
MMMMEETAEVGAANGGRAARAVAGGGRSAAAAARNNNSRNLQEQAAADGG SSGGINGDGGDELGAGRASYGDDLDTLDRRRTEELKLIGEFDSANINPRR ECWFIVDTKWLQSWAKFVRGEGPPPGRISNRGLVKDDLKTPVDGLVSRVD YRGVNPAVWFLYLEMYGKDSAQDLCRYVIDLYEAEVPLKYRREICEEPMR RAQVEVQKMRWRVEPEEARPPDKPQLCCCITERVIDCVFMSLFTCCSKWR RRCPWWLCCCCNAICPGRTSAAGGRYSRVTTGEDGEEDQDSDLDDDDDDD DDVDFGAREEEEDLYRLRRGRGGAGAPKRSG* back to top mRNA from alignment at E-siliculosus-1a_F_contig10:140987..148474-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10.50.1 ID=mRNA_E-siliculosus-1a_F_contig10.50.1|Name=mRNA_E-siliculosus-1a_F_contig10.50.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7488bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:140987..148474- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)TGGCACGGGAAATACGCCAGCAGATAGATAGCAGATGTACCGACAGAGGA
AACAGCCTCCCTGGCAAAAACCACG ATGATGATGATGGAGGAGACAGCAG
AAGTGGGGGCAGCCAACGGAGGAAGAGCAGCACGAGCAGTAGCAGGAGGA
GGCCGGAGCGCAGCAGCAGCAGCAAGAAATAACAACAGCCGAAATTTACA
AGAACAAGCGGCGGCGGACGGAGGAAGCAGCGGCGGAATCAACGGTGATG
GAGGGGACGAGCTAGGGGCCGGGAGAGCCTCTTACGGGGACGACCTCGAC
ACGCTCGACAGGCGCAGGACGGAGGAGCTCAAGCTCATTGGAGAATTTGA
TTC GTGAGTTATGTAGTTCTCGCCCCGGAAATTGCCCGCTCTCTCTTTCT
CTCCCCTAGACAAAAGGTCGACAGAGAGGCAATGCTGCTGAGCCTGTGGC
CTTCTTACCTCTCCCACTCGTGCCCAGTACTCCCTGCTTGTACGAGGGTT
GGTTTACTCTGTCCGCGTGCGTGTGCTCTTCCCTTCGTGTAGGTTTCACA
GGCAAGCACAATTGCGTGACAGCTATTCAAGAATAGATGCCACCGGTGAC
GAGTGTACCCGGGGGTGCGGAGGATTAGGATTGTATCCAGGAGTACCAGC
AGTAGCAGACCGCGAAGGTTAGTGCACACGAACGACGACGCACTCATATT
TTACTCTTGACGCACTGCGCAAGTAGTGATATCTGTTGTACCCACGATAG
CACGGTGGAGCTGTGCATATATAATGCGCAGCGGGGGGGATTTCAAACGA
GGTGGTGCTGCGGCGAGTGTCCCTCCCAGCTACGGCACACGACACGCATC
ACATCGCGCTCCGGAATGCACGATAAATGGGCCTGTGGCCTGTGCACCCT
GTCGTCCTCTCTGTAGTTTTCCCCTGTTCCTTGACCGCCGCGCAGTTTCC
ATGTACCTTTCTTACCCGAAGATATCCGATCCGGGTTCGCACGTTTGAAT
TTCTCTGCGGCTACTGCTCACAGCTTGATCCCCTATGCGAGAAATGTTAA
CCCGCACTAGGCAACACCGCCGTTCTACTGCTTACAATTCATGGTTAAGA
AATGCGAGACTAAAACAAGACTCGCCGGTCTTCGGACTCTCAGAGCCTAT
TGTAGGTGCTAAACATGTGCGGCGTGATCTTGTAGTGCTGATTCAACGAG
ATGACCGCAGCAGTCCAGACGCTGTAGCTTCCCCTGATTTTAAAGCGTAG
CCGAAGCTTTCTTATTTCTCATGCAAGGTACATAGTACGACGAAACACAA
ACAAATAATAAATGTCTTCCACAGACGAGAGTCTGAGATAGATTGGCAAC
AACGTTTTTTGTTTTCCCGCGTGGGGTGGCTGCAGTACAAACGAACGTCA
ATCACTATTCCTCAACGAGCATGAGACGTTTGTGTCCGTACTTTTAGCTT
TTCTGTCTACGGCGTTTGGATCAAGACCTTGTTCGATTATATATTATCAT
ACGCTGCGCTACAAGCAGTTGTCACAGGTGTTGCCGTGCAGCACGATCTC
AGCCAAGGTTCGGCAACCGGGAAACGTCTGCCTACCGAGCACGACCGTTT
TCTGCCGATCTCGCGCGACGCACATTACGCCCCACCGAGGGTGACCTAGT
CACCTTGCTCCTAAGCGAATGTGACTCCACAGCAGTATTAAGTAGCAACC
TGTGAGTGGCCGGAAGCGACTTCGGGAGCGGGCCCCAAGAATCCGCTTCG
GTAGTCTAGGCTTGAAAATGGAACACGGCCTTCTCTCCAACGCTGCTGAA
AGCTAGATTGCTCGCAATCAGGCGATCTACGCAGTAACGCTCTCACGTAT
CTATGCATACGAACACCCTTTTTGAGTGGCTGCGTGAGAGTGGTGATTCA
AAGTTCACGCCGGGGGTTCACTGCTGGCAACGCAAGCCGGGCTGTTGCTA
ATTCCGCCGGCGAGTTCATAACCTTGCGGGCTGTGCTGCGGCCTTGAAAG
ACACATCGCCCCTGCCTTGCAGAAGCGGGCCGTTCTTGTTGTTTACGCTG
AGCGCGAGACGCTGAAATTATAGACACGGTGGATGTGCCACCAACACAGC
GGTGGGGTACAACAATAGCTCGGCATGGTACGCACATCCGAAGAAAACCG
CGTCTTCGCGTTTTGACGCCGAAGCCCTTGTGTTCGGTTTGAAGAGTTGT
TTCCCCCGGCCCACCCCCGTTGTAACACCATCCCCAGGGCGAACATCAAC
CCTCGTCGCGAGTGCTGGTTCATCGTGGACACCAAGTGGTTGCAGAGCTG
GGCGAAGTTCGTTCGCGGAGAGGGGCCTCCGCCTGGGCGCATCAGCAACA
GGG GTGCGCCTACAACGGAATAGCGTAGTCCCGGCTGCGCAACTACAGAG
CAACAACACCAGTAGTCAGGCGGAGGCCGGCACATCGTGTGCGTTCGTAG
GGCGAACTAGGAAGACCTCGGCGCCCACAGCAGTAGGCTCCCCCTTTTTG
CTATTGATGTGTCATCTATGGATGCCCTCAACGGGCACTCTTTTTTTTTT
TTTGCTGTCAGAACTCCAACCACCCTTCGGCCGAACAAAGCAACAACAAG
CAGTTGCACAGCAGCAGGCTATAGTCGACAGCGTGGTGTCTATCCCGCTA
ATTCCAGCATATCTGTTCCAACATCTTGGTCCCGTCTCCTCTGAACCCTG
CCCGTAGATCCTTGACCGTTCAGTGAGGAAATGGCACAGCTTCTTGGATA
TTTTAAGTAGCGCACCACCGTACCCGAAAATCCAGACTTGGATATCCCTT
AGTCGATGTGTCCAAAACTTGAACCTTTAGAACGCAAGTGAGGGTTCCAA
TCACTGGTGTGGGGAGGAAAGGATCGTGGACGTCTCCAGCCGATGTGCGG
TCGGGCTATTCGGTAGAGTTCGGAGTGGACGTGCAAAAGGTACAAAGAAG
ATTTAGAGCGGTGAAGCTGGCGCGGAACAACCGATTGAAAGAGGGGTCCA
ATCATGCTTTGGCGACGGCTGCTGCTGTTGCTGGCTGCTGTATCTAGCCC
CACCGGTCTCCCGAATGCTGCCGACCTCTCGAACGTGTGACCCACGCCCG
CGCTGCGTATCCCCTCGCTTGTTTTCACCCTCGACGATCGAACTCGAGGC
AGGCTTGGTGAAGGACGACCTCAAGACGCCGGTGGACGGGCTGGTGTCGA
GGGTGGACTACCGCGGCGTTAACCCCGCCGTCTGGTTCCTTTATCTCGAG
ATGTACGGGAAGGACAGCGCTCAGGACCTGTGCAG GCGAGCTTGTTTGAG
CCACTACCGTGCCTCCTTACGAACGTAAACGAGCTTGATTTACAGCACTT
CAGCCTGTTTCTAACAAAACCGGACGTGCTCCAACCCGGCTTAGCAAAAA
TGCGTAGTCTACGGTTCTTAACGCATCATGAGCCCGAGTATCCCCTCGTT
GCCCATGTTCTTCATACCTATTACCCAACCCAGAGTAGTGATACTTGATT
TCATTCCGCACAGAACGGGTGGTGCGCTGTCGCGTTTTGCGGCGAATGGG
TGGGTGCCTCGCTTCAACCTGTTGCCAGGGGGAGTACGCATGCCTCTTTT
CCGTCTCCACTGGTGCTTGGCTTCTTTTCCGGCCCTTGTTCGTTGTGGGT
GTTGTTTCCCCACGGTGGTGTGCAGACGTGTTGCTTTGCCCGCTGTGAAC
GACGGAAACAAATGGCCCTTGGTCATCGTTTTGGGGCAGGGAGCCTGGTG
GTTTTTTCAGGGTTGGGGAATCGTCGGCTTGCTCGTCACGTTCTCTTGCG
TGCTTGGCGACGTTGAACCAACCGATCCTTCGGCTGAACACCATGCTCGT
GGCAAAATATTTTCCTGTGAAGAGGCTGGGCAATTATGGAGTAACCGGTA
CCAGTCACGCTCGGGATCCCTTCCCTCATCCCACTGTCTGAGTAGCCGGT
ACCGGAACCATAGCAATCGCGCAACCACCACCGAAGGATCAAAACTCCGT
TCTAGGTAGTACGCGCCCCGTTGCGTACAGTAGCCTTTGGGTGGAGGGAG
AACATGGAAAGGCATGCACGTCAACGACGCAATAGAGACGTACAGGTAGA
GAGTACTCGAGCGTTGCAGGGAGGAACAACTCCCGCCCAATGGATTGATG
TTACACCGCGATGGCGTAGAGGTAGACAGCAGTCAAGACGCGATCGTTGT
CTGACGGATGAACGCGCATGCGGCAGTCACGCCGATTTAATAGGGTCTAC
ATCATGCCGGGAAAAGGGCAAATGCGACTACCCTGCGAAAAATGGTCTCT
TGGTGGTGTCTGTCTTGGGAGCAGATAGGGAGCAGACACGGCAATGTCAC
CCAGGCAATGCACAGCACCCGCCCGCCCTTTTGTACCTCCTCTTGTTACA
CACACGACGCTCGAACCATGCACAACGCCAGGTACGTGATCGATCTGTAT
GAGGCAGAGGTGCCCCTCAAGTACCGACGAGAGATCTGCGAGGAGCCCAT
GCGAAGAGCACAGGTCGAG GTGAGGCTTGTTTCTCGTTCGGCATTGCTGT
TGCTGTGGCTCGTGGCAAGAGGACCGGTATAGCGAGGAGCGCGGATAAAA
GGCTTCGAACACACGCGCCTTCGTTGAGTCCTGGGCGATGAGTCTATTTG
GCGAAGAAGGATTCGGACTTGAAATCTCAGCTCCTGTGGCCCGTTTGTGA
AACGTCGTGCGAGTCCAGGCGTCAGAGCTGTTCAACTGCTCTCGAGTTGT
CTTGTAGACAGTTGAAACGTGCTTCCCTGACGCCTGACCGGCTGTAGTCT
ATGTCTTGCAAGGCCGAGGTTGACTGCTGTCAGTGTTTAATTGGGCATGC
GCAGTGCTTGGCGCTACGGGTCACGTCATGTTTCTGGTTTCTAAAGGTAT
ATGTACAGCCATACTAAATCCTAAACAATAAACGTTACGGGTGTGCCTCG
GTGTCTCTGCCTCGCCGTGCCTGCCCCAGGTGCAGAAGATGCGGTGGAGG
GTCGAGCCCGAAGAAGCGCGTCCGCCTGACAAACCTCAGCTCTGCTGCTG
CATCACCGAGAGG GTAAGTACGTTGTGCCATCGGTCCATAACCCGTAGCT
TGAGCTACCCCCCCTCAACCTGCTTGTTTATGTTCAGGCCTTGGCGATGT
CAAACCAATTCTTCTCCGTGCCATCACCAATGTTGGGTGGCATTGGAGAG
ATATATTCTCTCGTACGCAGAAATCAAGGGCTAGCCGTTAGCGCTAGCCG
TGTCTCAGATTTGCTGATTTTGTGGGATCTAGTGCTGCGACCTTGCACAC
AGCTCTCCGTACAACTTGTGCCTGCGCGGTAGCCGAAAGCGTGGATTAGC
CTTGAGGGCCGTAGGGCTGCCCAGTATTCTTCCCAAGACGCATTCACGTC
TACTTCATTTTCCGAACTGTCTGGTGGGAATTGCCAGTGCCGCTGCTGCG
GCTGCCATTGTTGTGGTGGTTTTTACCATACAAACAGGTCTGGCGCATTA
CAAGCAACTCGGTCTTTCGTGCTCTTGAAGCCCAGAGAACAGTTTTCGTG
GGGCTACCTACAAACCCAAGCTGAGGGAGAACAATAGTGACAAGACCCCA
GAAAATGTGCACCACATGCCAACAAGAGAAAATTTCAGAGATGGTTGAAT
CCGTGCAGAGAAGCAAGTATGGCAGAAAATGCCGAAGGAAAAGTAGAGCC
TGCCGCTGAACTCGGAAGTTGAGTTACCACGAACCTTCCGCAGTATTGAA
GTTACCCTCATGACTAACGGCAGAGCTGGAGAAGCTGCAGTAAGTGCGAG
TGAGTGGATACCCCCCAGGCCGAATTTTATAGCTTTATTGCCTCAAAACC
AAGAGGCTTTCGGCAGAAAATGTGTTGCTGGAAGATGTCGCCGAAAGCTT
TACTTGCGTGTGTTGCTCAGTTTTAGTACACGCTTCGGTTGTGGGGAATT
GGAACTTTGGGTCTGTTGAGATGAGGTTTTCGAGCCGGCCGTGACACGCA
TACACCAGTGGTGTGTGGGACCACTCGCACTTCTTTAGCATTTTCGCAAG
CCTGCCAAGCGCTTGAGTTGTGAATTTCCTTTTTTCGCCGACCCAGGCCA
CCCGCACAGCCCCTGCAGCACTCTGGTGTCGTGAAACAGCATCACGACCC
GAAGCGAAAGCGACATCGCGCATCGTGACAAAGAAGCACGAACTATCCCA
GACAAGGCTTGGTTGTTTCGTTTCGCAGCGTTGACGATCCCAAGCAAGAA
TTGGATGCGAGCATAGGCGGAGCACCCCAAGACAACCGTGTCGGGCAACG
TGCTTGAACTGATTTCGTCCCGTGCGTGTCCCTTCCACGCCAGGTGATCG
ACTGCGTGTTCATGTCGCTCTTTACCTGCTGCTCAAAGTGGCGCCGACGC
TGTCCGTGGTGGCTCTGCTGCTGCTGCAACGCCATCTGCCCCGGCCGCAC
GAGCGCAGCCGGCGGGCGATACAGTCGCGTCACGACAGGCGAAGACGGAG
AGGAGGACCAAGACAGTGATCTAGACGACGACGACGACGATGACGACGAC
GTCGATTTTGGCGCGAGAGAAGAGGAAGAAGACTTGTACCGGCTCAGGAG
AGGCAGAGGCGGGGCGGGGGCGCCGAAACGGAGCGGCTAA GTTTCCTATT
CGCCGAGACCCCGCGGTTTCGGATCGGTCGAGAGTGCGGAGATGGAACTG
GGGCCCCGTGCGGGACCGGTACAACTATTTCTACAGCTTCAGGATGATGT
GGGACGGTGGTTGTGCTGGTGAATGAAGTGAACGTGAATGCTGAAGGATT
TTGGTGATCGTTGATGCGATGCTATGTAGTGAACCCAAGTACTCGATCGC
CTGAGAAATGAGGTTGTATGTTTGAGATAAGGATATCGGCAGTACAGGTG
ATTGTCTTCATGGACGAGAGCTTGTTGCAGGTGTTTCTTATGGAGAACAA
GTTGGCCGTATCGCCGTATCCGCTTTTTGCACGCAAGCCCGGTGTGAAAG
CTGTGCATTTGTGTGATGCTACGAACATGCGAAATTTCGAATTTTTAGGA
CCCATAGATGTGTGTCGTTATCCGCCATGGTCATTGTGCTTCCACCACGA
ATTTGTTTGGGCCTTCCCGAGAGCCAGCGTAGACTTTTGAAGTGTATCCC
CCGTGCCAATCTCACGACCGAATGAGTCGGTCAGTACTTGAGCATCAACC
GAATGTAGCCGGAATGGAGTTTGGAGTCTAACCTGACGCACCGAACCAAT
CGGCCAGTACTTGTAGCCGGAAGAATGTCTTGGCACCTTGAGCAATGCAG
GGATCATTGGTACCTGCTATGGGAGTGTGCCTACCACAGTAGTACTGGAA
GGAGGATATTTCCGACGGTGTTGAAACCCGGTTGCGTTGTGCATTGTGTC
GTCCGTGTGCTCAAGATATCCGGAGCACGGCATTTCTCAGTGGCGGCGCG
GTCGCTCCCTCATCTGAAAATGACTTTTTTCCTTGCCG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10:140987..148474-
>mRNA_E-siliculosus-1a_F_contig10.50.1 ID=mRNA_E-siliculosus-1a_F_contig10.50.1|Name=mRNA_E-siliculosus-1a_F_contig10.50.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1992bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:140987..148474- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGATGATGATGGAGGAGACAGCAGAAGTGGGGGCAGCCAACGGAGGAAG AGCAGCACGAGCAGTAGCAGGAGGAGGCCGGAGCGCAGCAGCAGCAGCAA GAAATAACAACAGCCGAAATTTACAAGAACAAGCGGCGGCGGACGGAGGA AGCAGCGGCGGAATCAACGGTGATGGAGGGGACGAGCTAGGGGCCGGGAG AGCCTCTTACGGGGACGACCTCGACACGCTCGACAGGCGCAGGACGGAGG AGCTCAAGCTCATTGGAGAATTTGATTCATGATGATGATGGAGGAGACAG CAGAAGTGGGGGCAGCCAACGGAGGAAGAGCAGCACGAGCAGTAGCAGGA GGAGGCCGGAGCGCAGCAGCAGCAGCAAGAAATAACAACAGCCGAAATTT ACAAGAACAAGCGGCGGCGGACGGAGGAAGCAGCGGCGGAATCAACGGTG ATGGAGGGGACGAGCTAGGGGCCGGGAGAGCCTCTTACGGGGACGACCTC GACACGCTCGACAGGCGCAGGACGGAGGAGCTCAAGCTCATTGGAGAATT TGATTCGGCGAACATCAACCCTCGTCGCGAGTGCTGGTTCATCGTGGACA CCAAGTGGTTGCAGAGCTGGGCGAAGTTCGTTCGCGGAGAGGGGCCTCCG CCTGGGCGCATCAGCAACAGGGGGCGAACATCAACCCTCGTCGCGAGTGC TGGTTCATCGTGGACACCAAGTGGTTGCAGAGCTGGGCGAAGTTCGTTCG CGGAGAGGGGCCTCCGCCTGGGCGCATCAGCAACAGGGGCTTGGTGAAGG ACGACCTCAAGACGCCGGTGGACGGGCTGGTGTCGAGGGTGGACTACCGC GGCGTTAACCCCGCCGTCTGGTTCCTTTATCTCGAGATGTACGGGAAGGA CAGCGCTCAGGACCTGTGCAGGCTTGGTGAAGGACGACCTCAAGACGCCG GTGGACGGGCTGGTGTCGAGGGTGGACTACCGCGGCGTTAACCCCGCCGT CTGGTTCCTTTATCTCGAGATGTACGGGAAGGACAGCGCTCAGGACCTGT GCAGGTACGTGATCGATCTGTATGAGGCAGAGGTGCCCCTCAAGTACCGA CGAGAGATCTGCGAGGAGCCCATGCGAAGAGCACAGGTCGAGGTACGTGA TCGATCTGTATGAGGCAGAGGTGCCCCTCAAGTACCGACGAGAGATCTGC GAGGAGCCCATGCGAAGAGCACAGGTCGAGGTGCAGAAGATGCGGTGGAG GGTCGAGCCCGAAGAAGCGCGTCCGCCTGACAAACCTCAGCTCTGCTGCT GCATCACCGAGAGGGTGCAGAAGATGCGGTGGAGGGTCGAGCCCGAAGAA GCGCGTCCGCCTGACAAACCTCAGCTCTGCTGCTGCATCACCGAGAGGGT GATCGACTGCGTGTTCATGTCGCTCTTTACCTGCTGCTCAAAGTGGCGCC GACGCTGTCCGTGGTGGCTCTGCTGCTGCTGCAACGCCATCTGCCCCGGC CGCACGAGCGCAGCCGGCGGGCGATACAGTCGCGTCACGACAGGCGAAGA CGGAGAGGAGGACCAAGACAGTGATCTAGACGACGACGACGACGATGACG ACGACGTCGATTTTGGCGCGAGAGAAGAGGAAGAAGACTTGTACCGGCTC AGGAGAGGCAGAGGCGGGGCGGGGGCGCCGAAACGGAGCGGCTAAGTGAT CGACTGCGTGTTCATGTCGCTCTTTACCTGCTGCTCAAAGTGGCGCCGAC GCTGTCCGTGGTGGCTCTGCTGCTGCTGCAACGCCATCTGCCCCGGCCGC ACGAGCGCAGCCGGCGGGCGATACAGTCGCGTCACGACAGGCGAAGACGG AGAGGAGGACCAAGACAGTGATCTAGACGACGACGACGACGATGACGACG ACGTCGATTTTGGCGCGAGAGAAGAGGAAGAAGACTTGTACCGGCTCAGG AGAGGCAGAGGCGGGGCGGGGGCGCCGAAACGGAGCGGCTAA back to top