mRNA_E-siliculosus-1a_F_contig107.498.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig107.498.1
Unique NamemRNA_E-siliculosus-1a_F_contig107.498.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: D7FIZ9_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ9_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 1.820e-151
Identity = 223/235 (94.89%), Postives = 225/235 (95.74%), Query Frame = 2 
Query:   71 MMDRLSFSIFAIAHFVTHAFVPATFPHLGVRRATGLRMRSSPADEGMSRGQVIRSVAAACVVSSTAWSTAAVGVSAKAPAPVMKLPDADDGVKPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 775
            MMDRLSFSIFAIA  VTHAFVPATFPHLGVRRATGLRM SSPADEGMSRG+V+RSVAAACV  STAWST AVGVSAKAPAPVMKLPD DD  KPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVAD GKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR
Sbjct:    1 MMDRLSFSIFAIAQLVTHAFVPATFPHLGVRRATGLRMCSSPADEGMSRGEVLRSVAAACVTGSTAWSTTAVGVSAKAPAPVMKLPD-DDSAKPALRSGGEGSIPPFTVLPSGVQITDIVAGDGPVADTGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 234
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A835YL48_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL48_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.740e-46
Identity = 85/156 (54.49%), Postives = 111/156 (71.15%), Query Frame = 2 
Query:  317 MKLPDADDGVKPALR--SGGEG-SIPPFTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR 775
            + LP  ++   P L+  SG E  ++P F  LPSGV+ITDI  G+G     G  V+L+WV+RRSNGY+V SSE    +PFIYRVGDA++AIKG D+GIRGMK GG RR++VPPELGYV+G  D  PGP+P G GP++Q+  R  EP  FEV+++ VR
Sbjct:  193 VNLPVVEEFDTPQLKGLSGDENPNLPQFRALPSGVRITDIQVGNGAEVKEGSTVSLQWVLRRSNGYFVDSSEAHNYDPFIYRVGDAQKAIKGFDEGIRGMKQGGKRRMIVPPELGYVQGAADNKPGPVPTGYGPQRQVTNRKNEPFFFEVEVSHVR 348
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BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A1Z5JCU4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCU4_FISSO)

HSP 1 Score: 137 bits (345), Expect = 5.450e-35
Identity = 71/137 (51.82%), Postives = 94/137 (68.61%), Query Frame = 2 
Query:  389 FTVLPSGVQITDIVAGDGP-VADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQI----NTRNKEP---LTFEVKLTKVR 775
            +  LPSGV   D+  G G  +A+ G  V L+WV+RRSNGY+V SSE   G PFI+ VGD K AI+G+D+G++GMK GG RRI++PP L YVEG +DG PGP+P G GP+QQ+    N R   P   +  EV+LT++R
Sbjct:   39 YKKLPSGVVYADLRPGSGTEMAEQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVQGMKVGGVRRILIPPALAYVEGLEDGKPGPLPAGFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 174
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A7S4J203_9STRA (Peptidylprolyl isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J203_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.690e-34
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 2 
Query:  398 LPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQI 721
            LPSGV   D+  G G V + GK V ++WV++RSNGY+V SS    G PFI+ VGD K A+ G+D+GIRGM+ GG RRI+VPP L YVEG +DG PGPIP G GPKQ++
Sbjct:  106 LPSGVMYVDLRPGSGDVVEEGKRVNVQWVLKRSNGYFVDSSSNNDGVPFIFTVGDPKGAMAGVDEGIRGMRVGGIRRIIVPPNLAYVEGVEDGKPGPIPAGFGPKQRM 213
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BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: B8C0A9_THAPS (Peptidylprolyl isomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0A9_THAPS)

HSP 1 Score: 136 bits (343), Expect = 1.210e-33
Identity = 73/136 (53.68%), Postives = 85/136 (62.50%), Query Frame = 2 
Query:  389 FTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQIN----TRNKEP---LTFEVKLTKVR 775
            +  L SGV   DI AG G     G  V L+WV+RRSNGY+V SS      PFI+ VGD K AI GLD  +RGMK GGTRRI++PP+L YV G  DG PGPIP G GP+QQ+      R   P   +  EVKLTKVR
Sbjct:  128 YNKLESGVIYADINAGSGETVKEGSRVNLQWVLRRSNGYFVDSSAVSDSVPFIFTVGDPKGAIAGLDQAVRGMKVGGTRRILIPPKLAYVGGVDDGKPGPIPAGFGPRQQMRRVMEVRKDVPGEYIFLEVKLTKVR 263
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BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A1Z5K3Y4_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K3Y4_FISSO)

HSP 1 Score: 134 bits (338), Expect = 2.490e-33
Identity = 71/137 (51.82%), Postives = 91/137 (66.42%), Query Frame = 2 
Query:  389 FTVLPSGVQITDIVAGDGP-VADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQI----NTRNKEP---LTFEVKLTKVR 775
            +  LPSGV   D+  G G   A  G  V L+WV+RRSNGY+V SSE   G PFI+ VGD K AI+G+D+G+RGMK GG RRI++PP L YVEG +DG PGP+P   GP+QQ+    N R   P   +  EV+LT++R
Sbjct:   92 YKKLPSGVVYADLRPGSGTETAQQGSRVNLQWVLRRSNGYFVDSSERNDGVPFIFEVGDGK-AIQGIDEGVRGMKVGGVRRILIPPSLAYVEGLEDGKPGPLPACFGPRQQMRRVMNVRKDVPGEYVFLEVQLTRLR 227
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A7S2E2F1_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E2F1_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.620e-33
Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 2 
Query:  398 LPSGVQITDIVAGDGP-VADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQIN----TRNKEP---LTFEVKLTKVR 775
            LPSGV   D+  G G  VA  G  V ++WV+R+SNGY+V SSE   G PFI+ VGD   AI G+D+GIRGMK GG RR+++PP+  YV G +DG PGP+P G GPKQQ+      R   P   +  E++LT++R
Sbjct:   14 LPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQMRRVMEVRRDVPGEYIFLEIQLTRLR 147
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A7S2E4F5_9STRA (Peptidylprolyl isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E4F5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.780e-31
Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 2 
Query:  389 FTVLPSGVQITDIVAGDGP-VADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQIN----TRNKEP---LTFEVKLTKVR 775
            +  LPSGV   D+  G G  VA  G  V ++WV+R+SNGY+V SSE   G PFI+ VGD   AI G+D+GIRGMK GG RR+++PP+  YV G +DG PGP+P G GPKQQ+      R   P   +  E++LT++R
Sbjct:  186 YKKLPSGVIYADLRVGSGEEVASEGSRVNIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKSGAIAGVDEGIRGMKVGGVRRLLIPPKFAYVTGVEDGKPGPVPAGFGPKQQMRRVMEVRRDVPGEYIFLEIQLTRLR 322
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BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A6U3UST0_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3UST0_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.300e-31
Identity = 64/136 (47.06%), Postives = 88/136 (64.71%), Query Frame = 2 
Query:  389 FTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQIN----TRNKEP---LTFEVKLTKVR 775
            +  LPSGV   D+  G+G  A  G    ++WV+R+SNGY+V SSE   G PFI+ VGD   AI G+D+GIRGMK GG RR+++ P+  YV G +DG PGP+P+G GPKQQ+      R   P   +  E++LT++R
Sbjct:  128 YKKLPSGVIYADLRVGNGEEAVEGSRANIQWVLRKSNGYFVDSSEVSDGVPFIFTVGDKNGAIAGVDEGIRGMKVGGVRRLLIQPKYAYVTGVEDGKPGPLPVGFGPKQQMRRVMEARKDVPGEYIFLEIQLTRIR 263
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Match: A0A7S1Y8I9_9STRA (Peptidylprolyl isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y8I9_9STRA)

HSP 1 Score: 129 bits (323), Expect = 4.170e-31
Identity = 65/136 (47.79%), Postives = 88/136 (64.71%), Query Frame = 2 
Query:  389 FTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSSEEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCKDGNPGPIPMGLGPKQQI----NTRNKEP---LTFEVKLTKVR 775
            +  LPSGV   D+  G   VA  G  V L+WV+R+SNGY+V SSE     PFI+ +GD   AI G+D+ +RGMK+GG RRI++PP L YV+G +DG PGP+P G GP+QQ+    N R   P   +  EV+ T++R
Sbjct:   99 YKKLPSGVIYADLRQGKDVVASEGSKVNLQWVLRKSNGYFVDSSERNADVPFIFTIGDGT-AIAGVDEAVRGMKAGGVRRILIPPSLAYVQGLEDGKPGPLPYGFGPRQQMRRVQNVRADVPGEYIFLEVQATRIR 233
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ9_ECTSI1.820e-15194.89Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YL48_9STRA2.740e-4654.49Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A1Z5JCU4_FISSO5.450e-3551.82Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A7S4J203_9STRA1.690e-3458.33Peptidylprolyl isomerase n=1 Tax=Odontella aurita ... [more]
B8C0A9_THAPS1.210e-3353.68Peptidylprolyl isomerase n=1 Tax=Thalassiosira pse... [more]
A0A1Z5K3Y4_FISSO2.490e-3351.82Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A7S2E2F1_9STRA2.620e-3350.00Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A7S2E4F5_9STRA1.780e-3148.91Peptidylprolyl isomerase n=1 Tax=Helicotheca tames... [more]
A0A6U3UST0_9STRA3.300e-3147.06Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S1Y8I9_9STRA4.170e-3147.79Peptidylprolyl isomerase n=1 Tax=Grammatophora oce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig107contigE-siliculosus-1a_F_contig107:33661..39002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size708
Model size1324
Exons7
Ec32 orthologEc-07_004980.1
Ec32 ortholog descriptionPlastid FKBP domain protein
Hectar predicted targeting categorychloroplast
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.O
EggNOG OGsCOG0545@1,KOG0552@2759
EggNOG free text desc.histone peptidyl-prolyl isomerization
Seed eggNOG ortholog2880.D7FIZ9
Seed ortholog evalue1.3e-120
Seed ortholog score439.1
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927571.4548738-UTR-E-siliculosus-1a_F_contig107:33660..337301622927571.4548738-UTR-E-siliculosus-1a_F_contig107:33660..33730Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig107 33661..33730 +
1696318591.420054-UTR-E-siliculosus-1a_F_contig107:33660..337301696318591.420054-UTR-E-siliculosus-1a_F_contig107:33660..33730Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig107 33661..33730 +
1622927571.5463147-UTR-E-siliculosus-1a_F_contig107:38456..390021622927571.5463147-UTR-E-siliculosus-1a_F_contig107:38456..39002Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig107 38457..39002 +
1696318591.5046175-UTR-E-siliculosus-1a_F_contig107:38456..390021696318591.5046175-UTR-E-siliculosus-1a_F_contig107:38456..39002Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig107 38457..39002 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927571.470219-CDS-E-siliculosus-1a_F_contig107:33730..338651622927571.470219-CDS-E-siliculosus-1a_F_contig107:33730..33865Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 33731..33865 +
1696318591.4307325-CDS-E-siliculosus-1a_F_contig107:33730..338651696318591.4307325-CDS-E-siliculosus-1a_F_contig107:33730..33865Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 33731..33865 +
1622927571.4809725-CDS-E-siliculosus-1a_F_contig107:35325..354521622927571.4809725-CDS-E-siliculosus-1a_F_contig107:35325..35452Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 35326..35452 +
1696318591.4422286-CDS-E-siliculosus-1a_F_contig107:35325..354521696318591.4422286-CDS-E-siliculosus-1a_F_contig107:35325..35452Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 35326..35452 +
1622927571.4907887-CDS-E-siliculosus-1a_F_contig107:35951..360271622927571.4907887-CDS-E-siliculosus-1a_F_contig107:35951..36027Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 35952..36027 +
1696318591.4499755-CDS-E-siliculosus-1a_F_contig107:35951..360271696318591.4499755-CDS-E-siliculosus-1a_F_contig107:35951..36027Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 35952..36027 +
1622927571.5017507-CDS-E-siliculosus-1a_F_contig107:36307..364521622927571.5017507-CDS-E-siliculosus-1a_F_contig107:36307..36452Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 36308..36452 +
1696318591.457849-CDS-E-siliculosus-1a_F_contig107:36307..364521696318591.457849-CDS-E-siliculosus-1a_F_contig107:36307..36452Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 36308..36452 +
1622927571.5142748-CDS-E-siliculosus-1a_F_contig107:37038..371311622927571.5142748-CDS-E-siliculosus-1a_F_contig107:37038..37131Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 37039..37131 +
1696318591.465718-CDS-E-siliculosus-1a_F_contig107:37038..371311696318591.465718-CDS-E-siliculosus-1a_F_contig107:37038..37131Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 37039..37131 +
1622927571.525839-CDS-E-siliculosus-1a_F_contig107:37677..377821622927571.525839-CDS-E-siliculosus-1a_F_contig107:37677..37782Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 37678..37782 +
1696318591.4806514-CDS-E-siliculosus-1a_F_contig107:37677..377821696318591.4806514-CDS-E-siliculosus-1a_F_contig107:37677..37782Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 37678..37782 +
1622927571.5349803-CDS-E-siliculosus-1a_F_contig107:38429..384561622927571.5349803-CDS-E-siliculosus-1a_F_contig107:38429..38456Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 38430..38456 +
1696318591.4947126-CDS-E-siliculosus-1a_F_contig107:38429..384561696318591.4947126-CDS-E-siliculosus-1a_F_contig107:38429..38456Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 38430..38456 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig107.498.1prot_E-siliculosus-1a_F_contig107.498.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig107 33731..38456 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig107.498.1

>prot_E-siliculosus-1a_F_contig107.498.1 ID=prot_E-siliculosus-1a_F_contig107.498.1|Name=mRNA_E-siliculosus-1a_F_contig107.498.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=236bp
MMDRLSFSIFAIAHFVTHAFVPATFPHLGVRRATGLRMRSSPADEGMSRG
QVIRSVAAACVVSSTAWSTAAVGVSAKAPAPVMKLPDADDGVKPALRSGG
EGSIPPFTVLPSGVQITDIVAGDGPVADAGKGVTLKWVMRRSNGYYVSSS
EEGGGEPFIYRVGDAKRAIKGLDDGIRGMKSGGTRRIVVPPELGYVEGCK
DGNPGPIPMGLGPKQQINTRNKEPLTFEVKLTKVR*
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mRNA from alignment at E-siliculosus-1a_F_contig107:33661..39002+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig107.498.1 ID=mRNA_E-siliculosus-1a_F_contig107.498.1|Name=mRNA_E-siliculosus-1a_F_contig107.498.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5342bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig107:33661..39002+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGCCCACTGCCCCCTCTTCCTCCTCGGTCGCCTTGCTCACTTCCGTGCA
CACGAATCCCGACCGCAGAGATGATGGACCGATTGAGTTTCAGCATTTTC
GCCATTGCCCATTTCGTCACACATGCTTTTGTCCCCGCTACATTCCCGCA
TTTGGGTGTTCGTCGTGCAACCGGACTGCGCATGCGTTCCTCTCCTGCTG
ACGAGGTGTGTACAAGTTACCTTCCTGCAGTTGTTCAGCGCACATCGATG
CGGGTCAACTTGCGTTTCTATTTGCCTATGTCTTGAGAGTACGTGTTAGG
TTTTTGCCCTGTCTTTGCCGTGACGCCAGGGAAGTAAATAAGGCATTATG
TTCCGCGACCTGTACAACGTTAGTGCATCAAGCAGCAAACATGCGCACAC
AAACCATTCATCGTTTCAGGAGTCTGTAGCTTCAGCATGGTTGTCGATTG
GTAACATACCATATGCTGTGCTTATCTATGCTCATTCCTGCGACCGAAAG
CTGTTCGAGACTACGGAATCCCCAAAATATGTAACTCAAAGCCTGCCTTC
TGTCGGCGGACTGCTGGATTGTGTTGGATATCGACTGCCGTATACGCCGT
AAGATACCACACCCCCTGGACCGATTTTCAAAGCTCGATTACCGATTACT
CCACAACGAAGGGGATGCATCAACGAAACGGTGCGTTTTCGGAGAGCTCT
CGACCAGACGACTTCAACGCCGCTTTTTCGGCGCTGCGACTCTTTCTGCT
TTTGATAAATCGAGCTTCGAAAATCTGTCCAGGGAGTGTTTTATCTTGTG
TCGTACGTATACGCATGTATGGACATAGACTACCGTTTCCTGTGTGACTG
CGATGCGTTTGTAGAACTGTTGTGTGGTTTATTGTATTTGTTTTCAGCTT
GTAGAATGAGGGATTTGCCTGATGAAAGGTGAATAACTTGCAGCACTAAG
CACCTGGAACCTCCGAGCCCGAATTAGCTCAGCAAGACGCTCAATACGAT
CATCGCTTTTACTCCCAAAAGAGCTGGGAGGAAATAGGAGAACAGCTGAA
CCGTTACTTTGAACAGCACGCACCCGGCAAATCCTTCAATGGCACCTGTT
CGTGACCATGCGCCACAAATGTTCTTTGGAAGAAAACGGTTTTGTGTGGC
GGAGCATGCCCACCACGTAATTGCCGATGAGGGTTGGAAAACCATCGCTC
GCTGCGCACCAAATTTTCTTACTGGCACGTTTGCGGGATGCTACCGGCAG
CCTGAAGTTGGTGACTATTGTCACAAATGCAGATTGTTCATGAACAAAGG
CCGTGGCACATCACCATGCTCATGATGGTTTAAAGTACGCTCATCAAGAA
CCCGACCACCAGGTAGTCCTGGGGTCAAGGTGCTTTAAGAGCGACCGCTA
AACCGTCTCCAGATATCCATGCCGAGCAATACATCACGTTGCACGCACCG
CGTCCAGGAGGACTTCTTTGTATCCGAAATTCACCAGGAAGGCGCAGCAT
CTCGTAACAACGGATCCGTCGTGCACAGATTCAAGATGTCTGCAGAGTTT
AGTTGCAGATTAATTGGCATTGCGCATGAAATCGAGTTTTTCCGTACTGC
ACACGACTCACGGAAGATGTCTTCGCTTGACTTCCTCGCACAACAACGGC
TCATGTTTGCGCCAGGGCATGTCACGAGGACAAGTAATACGCAGCGTAGC
TGCAGCCTGCGTGGTCAGCAGTACGGCTTGGAGTACTGCGGCTGTCGGGG
TATCAGCCAAGGCGCCTGCACCTGTCATGAAGCTTCCGGACGGTGAGGAA
CAGGCGTTTTCCTTTGGCTGAACGCGATGTTTTGTCTCCACGGCAGAGAG
AAATATAGTAAGGTCATATAAATTAAGTGTTGTGACACTATCGTCAAATT
TGACGGCAACTCTGCGATCTGATTGATCCAACAAGAAGATTTGGCGTTGT
TGATAAATTTGTCTTCACGAAAGCTTGGCTCACGAGAACGGGAGGAAGCA
TCGACTGGATATGCTGTTGGGTGCGCTCTGCGATCATGTTGAGAATAGCA
TCTACCAATATTTAGTTATGAGACACGCAGCCAAGCCAGCCACGTTAAGT
CTCCGGCGTCGTGTGCGGAATGTCCAAGAATGTGTCAGGTTTGACGAACT
ATCGGGATTGGCGTATTTCTATTTGACTCAAACGATCAGCGTAAGGGTGC
AGTATGCACAATGCTATTAGTCTTGTGCGGCTTTAGTCTTCACCCCTTGT
CACCCCTTGCCTTTACGCGTGGTTTGTTGCCTTCTGTGGAGCAGATGACG
GTGTGAAGCCGGCACTGCGTAGCGGAGGCGAAGGAAGCATCCCACCCTTC
ACGGTCCTTCCATCCGGGTAATCTCAAAATAGCGTTTAGGTTCGTCAAAT
GTTTTCGAACACACGGAGTTGTTCGCCGCGCTCCCCATGAAGTCGAAAAG
GACATTATTCCGTGTATTTTCCTCCTTGCGATAGCCGCGCACCCGTTCGT
GCTTGAAACTGGGAGTTCACCTCTGATACGCGCTCGTGATGACTGAAGGC
TCTTTTTGCTTGCTCTGTGCGTCAGCGTACATTAGTTGGGACAAAGGGAC
TGTTTCAAACCCTCTTTGTTCCACGCCGCTCGCGGTCGATTGCCCAGGGT
CCAGATTACCGATATTGTTGCCGGTGATGGACCTGTTGCCGACGCCGGCA
AGGGTGTCACTCTGAAGTGGGTTATGCGCCGCTCGAACGGTTACTACGTC
AGTTCTTCCGAGGAGGGAGGAGGCGAGCCTTTCATCTACAGGGTGAGCGA
GACGCCTTTTAGGGAAAAGGCCGAGATTGACAAGCAACACACCGTGGTTT
CCTTGGTATGGTGCAGAATTGCGGTTGAAAGTTGAAAGTTGGGATCGGGA
CAAAATGTCGGTGAACCTATGCAGGGAAGGATGATGTTCCTACTCCCACT
GTTTGTGTATGCAAGTGTTTGAGAATTGTCCAAGGAAGAGTGGGATTTGC
ATTGTATATTGTCTCCCCAAAACCGAAAATTAAATAATTACCCACAAACA
CCAAAAAACAAAACAAAACACATATTCATTTATTAAGGATATGCATGTCG
ACGTCGAAAGAAGTGTTGACTTGGAATTGAAGCTGCCTGAGGATTTTTCA
AGCATGTGGTGAGTGGCGAACCTGCTGGATATTAAATGGAATCAGGCAAG
GGTCTCATGCACCACGGCACAGATCTAAGAAAAAAATGCTACAAAAGTTG
TTTGAGTGGTTTGCTCACCGTAAAAGCTGGAAGCAGGCACAAACCGAGGT
GACACAAGGAGAGAGGAGAGAAAGTTGAACAGAGAAGGCTGATAGGAAAT
ACCCTGTTGTTGCTTTTTTTCCTCCCAGGTGGGTGACGCGAAGCGAGCCA
TCAAGGGTTTGGACGATGGGATACGAGGAATGAAAAGCGGTGGCACTCGG
CGTATCGTGGTACCACCTGAGGTGAGTGCTGCCTACTCTCGGGCACACCA
CGAACATTGGAATTTTACCTACTTCGATGACCCTGAATGCACAGTACCTC
CAAGTACAGCAATGAGGTGGCTGAATTGGGAGATATTCATGCCCATTCGT
AAAGATATCGTAGTTTGTGACGCGAGTTGTAGGAGCGCCTCGGTAGGGGG
CAAGTGGAGGTGTTCTTCCTATGCATACGCCTTTCAACAAGACCTCTGTT
GCGAAAGCCCTACCGCGTGAACGCTTAGTATGCGATCCACCTCGTCAAAC
CGATAGACAGGGAGCATGCAAGCCCTGGAGTGAACAATGGTACATTTACA
CTCGCAGTAGAGTAGCTTATCTAATGAATATAGTTCCGTCCCAAAACTAG
GCTTGTTGAAACTAGGACAGAAGAGGAACCGCCCCACCTAGTATGAGGGC
ATCAGCGCAATGTTGCCTGGCTACCTTCCTTCATTGCTACCTACTCTGCG
CAACATTGCCGGTGTACGTGTGTGTGCTGCTGGGCCTCTTGTGTTTTTTT
TCACCCGCAACGCGCAGCTCGGCTATGTTGAAGGATGCAAGGACGGAAAT
CCGGGGCCGATCCCGATGGGCCTGGGGCCGAAGCAGCAGATCAACACCCG
CAACAAGGAGCCCCTGACCTTCGTGAGTGCTGAGTTAACCACCAGGCCTT
GATGGGCAATATTTCGCCAAGAAGAGCACGCCGGTGTCTATGTATTGCAG
TGTTTCAACAAGACGCCGGCGTCGGCATCGCGCTTGAAGCGCTATAATAG
ATACCACATGCTACCTAGCAGCAACATCTCGCTTCAGCAGCACAAACACC
AATGCGTGGGTTGAGGAAAACTCTTGAGGCGCTAGGATTGGTGCTGAATG
GGACAGTTCATTGGGCGAGACATGGCGAACAGAAACACCCAGCCGTAGAC
CAACTATGGGCAGATTGTTGGATTCGCTTCCCGACACAGTGGCCACGAGC
GCTGCGTCGAGTACACCGCTTCAGCTTTGCGAGATGGCTGCAACTCGGGT
TTTTGAAGACATTGCAAACTTCGACCGTTTGTTGTGACAAACGCGCACGT
TCACCTCTATCGATTTGTAGATTTGTCGGAGGTAAAGCATTCTTCGAGTG
CTACCAATCACTTGTCTTCAAAACGCATGTAAAAAAAAACAATCGAGTGT
TTTCGTGGCATGTGTTGTTGTTCTGGGTCAGGGTGAGATACGTCTTCACC
GTCATGGCTCGACGTATCCGCACGGTTTCCTGTCCTGTCTAACCGCTGAT
TGTTTGCTTTGGTTGGCAGGAGGTGAAATTGACCAAGGTTCGATAACGCG
TGGAATGAAGGAGAAAGAGAAAATCTGCTGCCGCGTCGACAATCATCAGA
TCAATGTGACTTTGACTGCGAGCAGGGCACGCTCGTTGGCATCGAATATA
AGCGTACAAACTTGACTAGACATTACGGGCTGTAATATTCATGTTTTTAG
AAGGTTGTGGGCGAAACAAGGAAGAAACCGACCTTGGGTCAGGGGGCATG
AGGGTATTAGTATTGACGGGATGTAGAGTATCGTCGGCAGGACCGTAGAG
TGTCGTCGGCAGGACAGCCAATAACGACAATCTGAAAAATGAATGCAGAA
ATTGACAACTCGGAGGATGAAAGCAGCGGTAAAAGTTGCCAATGCGCAGC
CTTCATCAAAACTACCGTAGAGAAGAATAGCAGAGCGCTTGACGCTTTGG
GGGCTCTGCCGCCGAATTGCAGCAGGTTAGTTTTTATGACGGACGCGTCA
CAACATTGCAGAGAGGGTATCGGAAACCTTGGAATCGCAATATCTACTGC
TCTCTGCGAGAGAGCATCCGCAAGCTTGGCGCTGTTTTTCCA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig107:33661..39002+

>mRNA_E-siliculosus-1a_F_contig107.498.1 ID=mRNA_E-siliculosus-1a_F_contig107.498.1|Name=mRNA_E-siliculosus-1a_F_contig107.498.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1416bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig107:33661..39002+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGATGGACCGATTGAGTTTCAGCATTTTCGCCATTGCCCATTTCGTCAC
ACATGCTTTTGTCCCCGCTACATTCCCGCATTTGGGTGTTCGTCGTGCAA
CCGGACTGCGCATGCGTTCCTCTCCTGCTGACGAGATGATGGACCGATTG
AGTTTCAGCATTTTCGCCATTGCCCATTTCGTCACACATGCTTTTGTCCC
CGCTACATTCCCGCATTTGGGTGTTCGTCGTGCAACCGGACTGCGCATGC
GTTCCTCTCCTGCTGACGAGGGCATGTCACGAGGACAAGTAATACGCAGC
GTAGCTGCAGCCTGCGTGGTCAGCAGTACGGCTTGGAGTACTGCGGCTGT
CGGGGTATCAGCCAAGGCGCCTGCACCTGTCATGAAGCTTCCGGACGGGC
ATGTCACGAGGACAAGTAATACGCAGCGTAGCTGCAGCCTGCGTGGTCAG
CAGTACGGCTTGGAGTACTGCGGCTGTCGGGGTATCAGCCAAGGCGCCTG
CACCTGTCATGAAGCTTCCGGACGCAGATGACGGTGTGAAGCCGGCACTG
CGTAGCGGAGGCGAAGGAAGCATCCCACCCTTCACGGTCCTTCCATCCGG
CAGATGACGGTGTGAAGCCGGCACTGCGTAGCGGAGGCGAAGGAAGCATC
CCACCCTTCACGGTCCTTCCATCCGGGGTCCAGATTACCGATATTGTTGC
CGGTGATGGACCTGTTGCCGACGCCGGCAAGGGTGTCACTCTGAAGTGGG
TTATGCGCCGCTCGAACGGTTACTACGTCAGTTCTTCCGAGGAGGGAGGA
GGCGAGCCTTTCATCTACAGGGGTCCAGATTACCGATATTGTTGCCGGTG
ATGGACCTGTTGCCGACGCCGGCAAGGGTGTCACTCTGAAGTGGGTTATG
CGCCGCTCGAACGGTTACTACGTCAGTTCTTCCGAGGAGGGAGGAGGCGA
GCCTTTCATCTACAGGGTGGGTGACGCGAAGCGAGCCATCAAGGGTTTGG
ACGATGGGATACGAGGAATGAAAAGCGGTGGCACTCGGCGTATCGTGGTA
CCACCTGAGGTGGGTGACGCGAAGCGAGCCATCAAGGGTTTGGACGATGG
GATACGAGGAATGAAAAGCGGTGGCACTCGGCGTATCGTGGTACCACCTG
AGCTCGGCTATGTTGAAGGATGCAAGGACGGAAATCCGGGGCCGATCCCG
ATGGGCCTGGGGCCGAAGCAGCAGATCAACACCCGCAACAAGGAGCCCCT
GACCTTCCTCGGCTATGTTGAAGGATGCAAGGACGGAAATCCGGGGCCGA
TCCCGATGGGCCTGGGGCCGAAGCAGCAGATCAACACCCGCAACAAGGAG
CCCCTGACCTTCGAGGTGAAATTGACCAAGGTTCGATAAGAGGTGAAATT
GACCAAGGTTCGATAA
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