mRNA_E-siliculosus-1a_F_contig107.494.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig107.494.1
Unique NamemRNA_E-siliculosus-1a_F_contig107.494.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: D7FIZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ5_ECTSI)

HSP 1 Score: 660 bits (1704), Expect = 9.640e-237
Identity = 329/341 (96.48%), Postives = 337/341 (98.83%), Query Frame = 1
Query:    1 LQHCTAVHGQGRHSEVDVNMEHRSAIGLFLSLAVHVNRPAAALNTRLPIGRGVRALHTTTAAADAGDTSSYIVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEELIAYIEMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQFFGMATL 1023
            LQHCTAVHGQGRHS VD+NMEHRSAIGLFLSLAVH+NRPAAALNTRLPIGRGVR LHTT AAADAG++SSYIVDVDANLLHADLSNDIDHHIQ+ASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEEL AYI+MGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRV+AECLGLPFEEVA+ATLQNSRQFFGMATL
Sbjct:    6 LQHCTAVHGQGRHSGVDINMEHRSAIGLFLSLAVHLNRPAAALNTRLPIGRGVRGLHTT-AAADAGESSSYIVDVDANLLHADLSNDIDHHIQIASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEELTAYIDMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRVLAECLGLPFEEVAQATLQNSRQFFGMATL 345          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: A0A835Z870_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z870_9STRA)

HSP 1 Score: 317 bits (812), Expect = 7.430e-102
Identity = 153/268 (57.09%), Postives = 202/268 (75.37%), Query Frame = 1
Query:  214 IVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASH-GLPPCLVHCFTGSEEELIAYIEMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQFFGM 1014
            +VDVDANL H  L+ D   HI +A  VGV+Q VVPGS + DS+ +L+LAR+ P +++ TAG+HPY V+ CG LE AM+++A L A     CVGECGLD+SEGFP  ELQLP+FERQV+LA + +KPLFLHER A   F++VLR  +A+  GLPPCLVHCFTG+  EL  Y++MGF++ V G + ++  G  LR  ++++PLDRLMVETDAPYLGF GCRKGH +PK+Q PNVPSALP VV+ VA+ +G+   +VA  + +N+R+FFGM
Sbjct:   50 LVDVDANLCHEALAADAAVHIDMARDVGVRQMVVPGSDLADSKAALDLARKYPGILYPTAGIHPYCVKDCGELEPAMSTLAELLADPLFTCVGECGLDFSEGFPEPELQLPFFERQVQLAVETRKPLFLHERLASRPFTDVLRAANAAPPGLPPCLVHCFTGTGSELSVYLQMGFYIGVTGFLLKKPHGNVLRGCLQQVPLDRLMVETDAPYLGFPGCRKGHSQPKRQYPNVPSALPLVVQAVADAMGVSALDVAAHSTRNARKFFGM 317          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: K3WCX9_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum TaxID=2052682 RepID=K3WCX9_GLOUD)

HSP 1 Score: 266 bits (680), Expect = 1.760e-82
Identity = 128/271 (47.23%), Postives = 186/271 (68.63%), Query Frame = 1
Query:  214 IVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHG--LPPCLVHCFTGSEEELIAYIEMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDK-PKKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQFFGMA 1017
            + D D NL H D+  D++ H+Q  ++ GV + +VPG+T+E+S+ +++L R+ P  +F TAGVHPYH     + E+ +A+++ LA  EE R VGECGLDYS  FP A+LQ  WF+ Q++LAC+L+KPLFLHER A  DF  ++++         PP +VHCFTG+E+EL  Y+  GF++ + G IC+++ GA+LRA V+ IPL +L++ETDAPY+GF  CR+     PKKQ PNVPSALP VV  +A  LG   +E+A  T  N+R+F  ++
Sbjct:   19 LFDFDCNLTHDDMVADVEMHMQHGAAAGVTEMLVPGATLEESQAAIDLCRKYPTQLFPTAGVHPYHALALPTPEE-LATLSDLAQLEECRAVGECGLDYSPSFPDAKLQQEWFKVQLDLACRLQKPLFLHERLAHDDFMALIKQCQQKFNDYFPPVVVHCFTGNEQELREYVRQGFYIGITGFICKKEHGASLRAMVQHIPLQKLVIETDAPYMGFPKCRRYEPSHPKKQYPNVPSALPQVVEAIATALGKTPQEIALITKANARRFLRLS 288          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: A0A662WGG9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG9_9STRA)

HSP 1 Score: 258 bits (660), Expect = 7.150e-79
Identity = 136/273 (49.82%), Postives = 185/273 (67.77%), Query Frame = 1
Query:  214 IVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVL----RRYDASHGLPPCLVHCFTGSEEELIAYIEMG--FFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKP---KKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQF 1005
            + D D NL H DL  D+   +  A+SVGV + +VPGST+E+S+ ++EL R+ P  +F TAGVHPYH     + E+ +A++  L    E R VGECGLDYS GFPA ELQ  WF  Q+ LAC+L+KPLFLHER A  DF +++    +++D     PP +VHCFTG+E EL AY+  G  +++ V G IC+++ GAALR  V+ +PLDRL++ETDAPY+GF  CR+  D+P   KKQ PNVPSALP VV+ VA  LG   +E+ + T  N+R+F
Sbjct:   64 LFDFDCNLTHDDLKGDVAAVMTQAASVGVTEMLVPGSTLEESQRAIELCRQYPTQLFPTAGVHPYHALASPTTEE-LATLRDLLELGEVRAVGECGLDYSPGFPAPELQKKWFVEQLALACRLRKPLFLHERLAHEDFLKLVDDATKQFDGY--FPPAVVHCFTGNERELQAYLARGDDWYIGVTGFICKKQHGAALREMVRHVPLDRLVLETDAPYMGFPKCRR--DEPNDRKKQYPNVPSALPQVVQAVAAALGRSPQEIGKITKANARRF 331          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: A0A5D6YB90_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB90_9STRA)

HSP 1 Score: 254 bits (649), Expect = 4.000e-77
Identity = 130/271 (47.97%), Postives = 175/271 (64.58%), Query Frame = 1
Query:  214 IVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHG--LPPCLVHCFTGSEEELIAYIEMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCR-KGHDKPKKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQFFGMA 1017
            + D D NL H DL+      +  A++ GV + +VPG+T+++SR +L L+R  P+ +F+TAGVHPY+        + +  +  LA   E R VGECGLDYS GFP AE Q  WF  Q+ELAC+L++PLFLHER A  DF   +    A  G   PP +VHCFTG+E EL AY+  GF++ V G +CR++ GA LR  ++ +PL RL++ETDAPY+GF  CR +    PKKQ PNVPSALP V   VA  LGL  +EVA AT  N+R+F  ++
Sbjct:   72 LFDFDCNLTHDDLTPLALDAMVRAAAAGVSEMLVPGATLDESRAALTLSRDHPHTLFATAGVHPYNAHAAPETHE-LEELEALAVLPECRAVGECGLDYSPGFPPAEPQREWFRAQLELACRLRQPLFLHERLAHDDFVATVASCQARFGDAFPPAVVHCFTGTERELRAYVARGFYIGVTGFVCRKELGAPLREMLRLVPLQRLVIETDAPYMGFPKCRGREPTDPKKQYPNVPSALPLVAETVAAALGLTAQEVATATRANARRFLRLS 341          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: A0A075LY60_PHYSO (TatD related DNase n=1 Tax=Phytophthora sojae TaxID=67593 RepID=A0A075LY60_PHYSO)

HSP 1 Score: 253 bits (647), Expect = 5.010e-77
Identity = 131/269 (48.70%), Postives = 180/269 (66.91%), Query Frame = 1
Query:  214 IVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHG--LPPCLVHCFTGSEEELIAYIEMG--FFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDK-PKKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQF 1005
            + D D NL H DL +++   +Q A +VGVK+ +VPG+T+++S+ ++EL R+ P  +F TAGVHPY+ +   + ++ + ++  L    E R VGECGLDYS  FP  E Q  WF  Q+ LAC+LKKPLFLHER A  DF +++    A  G   PP +VHCFTG+EEEL AY+  G  +++ V G IC+ K GAAL+  VK +PL+RLM+ETDAPY+GF  CR+     PKKQ PNVPSA+P V + VA  LG   +EVA+ T  N+R+F
Sbjct:   58 LFDFDCNLTHEDLRDNVAALMQQAEAVGVKEMLVPGATIDESQRAVELCRQHPTKLFPTAGVHPYNARAMPTQQE-LTTLKGLMELPEVRAVGECGLDYSPSFPEPEFQKKWFAEQLLLACELKKPLFLHERLAHQDFIQLIDEATAKAGGYFPPAVVHCFTGNEEELKAYVARGDDWYIGVTGFICK-KQGAALQEMVKHVPLERLMLETDAPYMGFPKCRRAEKSDPKKQYPNVPSAMPLVAQAVATALGRSPQEVAKITRANARRF 324          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: M4B6D3_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis TaxID=272952 RepID=M4B6D3_HYAAE)

HSP 1 Score: 252 bits (644), Expect = 1.280e-76
Identity = 132/276 (47.83%), Postives = 183/276 (66.30%), Query Frame = 1
Query:  199 DTSSYIVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVL----RRYDASHGLPPCLVHCFTGSEEELIAYIEMG--FFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPK-KQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQF 1005
            D    ++D D NL H DL ++I+  +Q A+SVGVK+ +VPG+++E+S+ ++EL  + P  +F TAGVHPY+ Q    +E+ + ++  L   E+ R VGECGLDYS  FP  E Q  WF  Q+ +AC L+KPLFLHER A  DF E++    R  D     PP +VHCFTGSEEEL AY+  G  +++ + G IC+ + GAAL+  +K +PLDRL++ETDAPY+GF  CR+     + KQ PNVPSA+P V + VA  LGL  +EVAR T  N+R+F
Sbjct:   50 DVDLELIDFDCNLTHQDLQHNIESLMQQAASVGVKEMLVPGASIEESQRAIELCSQHPTKLFPTAGVHPYNAQAMPKVEE-LTTLQDLLKLEQVRAVGECGLDYSPSFPEREYQRNWFAEQLAMACALRKPLFLHERQAHHDFIELIDAATRNCDGY--FPPAVVHCFTGSEEELKAYVARGDEWYIGITGFICKPQ-GAALKKMLKHVPLDRLVLETDAPYMGFPKCRRAELTGRNKQYPNVPSAIPLVAQTVASALGLSPQEVARITRANARRF 321          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: A0A8K1FN21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN21_PYTOL)

HSP 1 Score: 249 bits (637), Expect = 3.670e-76
Identity = 126/273 (46.15%), Postives = 181/273 (66.30%), Query Frame = 1
Query:  199 DTSSYIVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHG--LPPCLVHCFTGSEEELIAYIEMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCR--KGHDKPKKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQF 1005
            D+ + + D DANL H DL  D    ++ A+SVGV + +VPG+T+++S  ++ L R+ P  +F TAGVHPYH +   + +  +  +  +AA ++   VGECGLDYS  FP A+ Q  WF  Q+ELAC+L+KPLFLHER A  DF  ++    A      PP +VHCFTG+E+EL+ Y+   F++ V G IC++  GAALR  ++ +PL++L++ETDAPY+GF  CR  +  DK KKQ PNVPSALP V  VVA+ LG   +++A+ T  N+R+F
Sbjct:    6 DSETVLFDFDANLTHDDLVQDAAAVMERAASVGVTEMLVPGATLDESEATIALCRQHPTNLFPTAGVHPYHAEALPT-DAELERLRGMAAQQDVLAVGECGLDYSPSFPDAKWQKAWFTVQLELACELQKPLFLHERLAHADFLALISECQAKFNGYFPPAVVHCFTGTEDELLEYVRRDFYIGVTGYICKKDRGAALRDMLRHVPLNKLVIETDAPYMGFPKCRSVESADK-KKQYPNVPSALPQVCEVVAQVLGKTPQDIAQITRANARRF 276          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: A0A6A3Y5D0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y5D0_9STRA)

HSP 1 Score: 251 bits (641), Expect = 3.930e-76
Identity = 128/269 (47.58%), Postives = 179/269 (66.54%), Query Frame = 1
Query:  214 IVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHG--LPPCLVHCFTGSEEELIAYIEMG--FFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGH-DKPKKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQF 1005
            + D D NL H DL  ++   +Q AS+VGVK+ +VPG+T+++S+ ++EL R+ P  +F TAGVHPY+ +   S ++ + ++  L   +E R VGECGLDYS  FP  E Q  WF  Q+ +AC+LKKPLFLHER A  DF +++    A  G   PP +VHCFTG+EEEL AY+  G  +++ + G IC+ K GAAL+  VK +PL+RL++ETDAPY+GF  CR+      KKQ PNVPSA+P V +  A  LG   +EVA+ T  N+R+F
Sbjct:   58 LFDFDCNLTHEDLRGNVATLMQQASTVGVKEMLVPGATIDESQRAIELCRQHPTKLFPTAGVHPYNARAIPSQQE-LTTLKGLMELQEVRAVGECGLDYSPSFPEPEFQKKWFAEQLSVACELKKPLFLHERLAHEDFIQLIDEATAKSGGYFPPAVVHCFTGTEEELKAYVARGDDWYIGITGFICK-KQGAALQEMVKHVPLERLVLETDAPYMGFPKCRRAEVSDQKKQYPNVPSAMPRVAQAAATALGRSPQEVAKITRANARRF 324          
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Match: A0A024TGJ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGJ1_9STRA)

HSP 1 Score: 250 bits (639), Expect = 4.910e-76
Identity = 133/273 (48.72%), Postives = 179/273 (65.57%), Query Frame = 1
Query:  199 DTSSYIVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEELIAYIEMGFFVSVAGGICREKSGAALRA--AVKRIPLDRLMVETDAPYLGFSGCRKGHDKP--KKQNPNVPSALPAVVRVVAECLGLPFEEVARATLQNSRQF 1005
            D +  + D D N+ H +     D  +Q A  V V Q +VPGST+E+S   L LAR+ P+ VF TAGVHPY+       E+  A+++ LAA  E   VGECGLDYS+GFP+ +LQL WF  Q+ LA  L+KPLFLHER A   F + L  +     LPP  VHCFTG+ +E   YI+MGF++ + G +C+E  GAAL++  A   +PLDRL+VETDAPY+GF GCR G +    K+Q PNVP++LP VV+ +A+C+G+   EVAR T +N+RQF
Sbjct:   41 DDTVDLFDFDCNVTHPEFKGQEDALVQCARRVRVTQMLVPGSTIEESHECLALARQHPSTVFPTAGVHPYNATKPFDAEE-FATLSVLAANTEIVAVGECGLDYSDGFPSPDLQLSWFGPQLSLAVSLQKPLFLHERLAHEPFLDALTPH--LDNLPPACVHCFTGTTDEAQVYIKMGFYIGITGFVCKEPHGAALQSMLAAGILPLDRLVVETDAPYMGFPGCR-GFESTGGKRQFPNVPTSLPKVVQAIADCVGVSPAEVARITTRNARQF 309          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ5_ECTSI9.640e-23796.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z870_9STRA7.430e-10257.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3WCX9_GLOUD1.760e-8247.23Uncharacterized protein n=2 Tax=Globisporangium ul... [more]
A0A662WGG9_9STRA7.150e-7949.82Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A5D6YB90_9STRA4.000e-7747.97Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A075LY60_PHYSO5.010e-7748.70TatD related DNase n=1 Tax=Phytophthora sojae TaxI... [more]
M4B6D3_HYAAE1.280e-7647.83Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]
A0A8K1FN21_PYTOL3.670e-7646.15Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3Y5D0_9STRA3.930e-7647.58Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A024TGJ1_9STRA4.910e-7648.72Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig107contigE-siliculosus-1a_F_contig107:7671..12096 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size969
Model size1483
Exons9
Ec32 orthologEc-07_005020.1
Ec32 ortholog descriptionTatD family
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.L
EggNOG OGsCOG0084@1,KOG3020@2759
EggNOG free text desc.hydrolase activity, acting on ester bonds
KEGG koko:K03424
Seed eggNOG ortholog2880.D7FIZ5
Seed ortholog evalue7.8e-177
Seed ortholog score626.3
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927570.9004827-UTR-E-siliculosus-1a_F_contig107:7670..77271622927570.9004827-UTR-E-siliculosus-1a_F_contig107:7670..7727Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig107 7671..7727 +
1696318591.0320392-UTR-E-siliculosus-1a_F_contig107:7670..77271696318591.0320392-UTR-E-siliculosus-1a_F_contig107:7670..7727Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig107 7671..7727 +
1622927571.0174003-UTR-E-siliculosus-1a_F_contig107:11639..120961622927571.0174003-UTR-E-siliculosus-1a_F_contig107:11639..12096Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig107 11640..12096 +
1696318591.144952-UTR-E-siliculosus-1a_F_contig107:11639..120961696318591.144952-UTR-E-siliculosus-1a_F_contig107:11639..12096Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig107 11640..12096 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927570.9113958-CDS-E-siliculosus-1a_F_contig107:7727..79491622927570.9113958-CDS-E-siliculosus-1a_F_contig107:7727..7949Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 7728..7949 +
1696318591.0456223-CDS-E-siliculosus-1a_F_contig107:7727..79491696318591.0456223-CDS-E-siliculosus-1a_F_contig107:7727..7949Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 7728..7949 +
1622927570.9210927-CDS-E-siliculosus-1a_F_contig107:8112..82081622927570.9210927-CDS-E-siliculosus-1a_F_contig107:8112..8208Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 8113..8208 +
1696318591.0576215-CDS-E-siliculosus-1a_F_contig107:8112..82081696318591.0576215-CDS-E-siliculosus-1a_F_contig107:8112..8208Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 8113..8208 +
1622927570.9316225-CDS-E-siliculosus-1a_F_contig107:8770..88731622927570.9316225-CDS-E-siliculosus-1a_F_contig107:8770..8873Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 8771..8873 +
1696318591.0697036-CDS-E-siliculosus-1a_F_contig107:8770..88731696318591.0697036-CDS-E-siliculosus-1a_F_contig107:8770..8873Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 8771..8873 +
1622927570.9416587-CDS-E-siliculosus-1a_F_contig107:9288..93891622927570.9416587-CDS-E-siliculosus-1a_F_contig107:9288..9389Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 9289..9389 +
1696318591.07944-CDS-E-siliculosus-1a_F_contig107:9288..93891696318591.07944-CDS-E-siliculosus-1a_F_contig107:9288..9389Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 9289..9389 +
1622927570.952756-CDS-E-siliculosus-1a_F_contig107:9636..96901622927570.952756-CDS-E-siliculosus-1a_F_contig107:9636..9690Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 9637..9690 +
1696318591.0937128-CDS-E-siliculosus-1a_F_contig107:9636..96901696318591.0937128-CDS-E-siliculosus-1a_F_contig107:9636..9690Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 9637..9690 +
1622927570.9637349-CDS-E-siliculosus-1a_F_contig107:9902..99741622927570.9637349-CDS-E-siliculosus-1a_F_contig107:9902..9974Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 9903..9974 +
1696318591.1050289-CDS-E-siliculosus-1a_F_contig107:9902..99741696318591.1050289-CDS-E-siliculosus-1a_F_contig107:9902..9974Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 9903..9974 +
1622927570.9759362-CDS-E-siliculosus-1a_F_contig107:10246..103361622927570.9759362-CDS-E-siliculosus-1a_F_contig107:10246..10336Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 10247..10336 +
1696318591.1141999-CDS-E-siliculosus-1a_F_contig107:10246..103361696318591.1141999-CDS-E-siliculosus-1a_F_contig107:10246..10336Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 10247..10336 +
1622927570.9903872-CDS-E-siliculosus-1a_F_contig107:10677..107761622927570.9903872-CDS-E-siliculosus-1a_F_contig107:10677..10776Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 10678..10776 +
1696318591.12514-CDS-E-siliculosus-1a_F_contig107:10677..107761696318591.12514-CDS-E-siliculosus-1a_F_contig107:10677..10776Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 10678..10776 +
1622927571.005808-CDS-E-siliculosus-1a_F_contig107:11507..116391622927571.005808-CDS-E-siliculosus-1a_F_contig107:11507..11639Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 11508..11639 +
1696318591.1351755-CDS-E-siliculosus-1a_F_contig107:11507..116391696318591.1351755-CDS-E-siliculosus-1a_F_contig107:11507..11639Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig107 11508..11639 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig107.494.1prot_E-siliculosus-1a_F_contig107.494.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig107 7728..11639 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig107.494.1

>prot_E-siliculosus-1a_F_contig107.494.1 ID=prot_E-siliculosus-1a_F_contig107.494.1|Name=mRNA_E-siliculosus-1a_F_contig107.494.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=323bp
MEHRSAIGLFLSLAVHVNRPAAALNTRLPIGRGVRALHTTTAAADAGDTS
SYIVDVDANLLHADLSNDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLEL
ARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLD
YSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDAS
HGLPPCLVHCFTGSEEELIAYIEMGFFVSVAGGICREKSGAALRAAVKRI
PLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRVVAECLGL
PFEEVARATLQNSRQFFGMATL*
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mRNA from alignment at E-siliculosus-1a_F_contig107:7671..12096+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig107.494.1 ID=mRNA_E-siliculosus-1a_F_contig107.494.1|Name=mRNA_E-siliculosus-1a_F_contig107.494.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4426bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig107:7671..12096+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGCAACACTGCACTGCGGTGCACGGGCAAGGCAGGCACAGCGAAGTAGA CGTTAACATGGAACACCGGAGTGCTATTGGTCTCTTTTTGTCGCTTGCAG TCCACGTGAATCGCCCGGCGGCAGCACTCAATACCCGCCTTCCTATCGGA CGCGGGGTTCGAGCACTTCACACAACAACCGCAGCAGCGGACGCAGGCGA CACGAGCAGTTATATCGTTGATGTCGATGCAAATCTGCTGCATGCCGACC TCTCCAACGACATCGACCATCACATACAGGTATTGAGTAGTCCAGATAAT GTGTTGGTGGGAATGCAAAGCGGGAGCATATGGCAAGCGCGCGTACTGCA TATGCGATATTGACAGCGGTTGACCCACGTCCTCATATGTTCACCGACCG CATGATCGCGATGTTCTGGTCATGATTTGCTTTGCGGTCCAGGTAGCCTC TTCGGTTGGGGTGAAGCAATTCGTGGTACCTGGGAGCACAGTGGAAGACA GCCGGGGCTCTTTGGAACTGGCGCGACGAAAACCCAATGTGAGCAGCACA TCCTACTTACTGCTTATGCGTATATATCAACTCTTTATGTACAAGCATCC ACAGTTGTCAAATCTTTGTTTGTCCCCAACATAGCCATACGAGGAACCAC ATCTACACACTTGCGCGAAGTTGTTACGTTTGATAGCCTTGCTTGACCAA GCCGACACCTGCGTCCAAGGCGTGGTCATACATGAATCAGACGTTTCTGC CATCCGTATTGAATGTGCGTTTTAGCGACGAGCGAGTTGTGTTACCCGTC CGTTGCATTCGCCAGTGCCCATGTATTTACACTATGAGTGAGTAGGTCTC GGTAAACCCCATGCTGCGCGTGCACTGGCCTTTGTAGATCGCTGTCTGTT ACCTATGCATACGTGCATTGGTTGCTGCAACATGCGCATTTATTCAGCGA CCACAATGTACAGCAGTCGCCAGTTTCTGTTTTGCGTTTGACTAGTAAAA AGAAACGACAAGCTTACTACACATCGAAGGGCGCAACGTATCACTGCATC TTCCCCACAAGAAGACTCCTTTGTCGGCTCCTCGCACGTTATGCCGCAAG GTTGTGTTTTCGACTGCTGGGGTCCATCCATACCACGTCCAGGGGTGCGG CTCGCTCGAGGATGCCATGGCGAGCATCGCCACTCTCGCAGCAACTGAGG AAGGTGAACGTTAGCGTTTGCAGTAGGAGAAGCGCGTTCCTCGCAACTTC TCGTCGATCTTCGTAGTACACATTTTGTACACACGCAGACATCATTGGTG AGGCTAGGGCTTGGTGAGCTCTGTTCCCTTGTCCCGAACGGAGCCCAAAC GGGATAAACTTGTTTATCTACGCCGCACATACTGAAAGCGAATTTGCAGG ACGTGAGCCGCTGGGTCTGCACAATATTGATGATTGCGAACTGAAGTCGT CCCGCTGGGAAGACTAGCTCTATCTCGCTATGTTTTCTTCGCCACTCGTT TGGGCCGATGCACTACATGGCGCGCCCTGCGCTCTACGGCGGAGCGCCTT AGTTCTTCAAAATCGTGACGCCGGCACTGAGCCTTTTCAACCATAACGTG GTCCACTTGCGTGCGAAGCTCGTTGCGTGGGAGAATGCGGTTTGGACTAC TCAGAAGGCTTTCCCGCGGCCGAACTGCAGCTGCCGTGGTTTGAGAGACA AGTTGAGCTTGCGTGCAAGGTGAGCGACGGTGATAAGCATGGGCATGCGA TATTCCGCTTCGAGAGCAGGCTTGCTTGTCTTGCTTGTCCCTTGCGCCGA TGCGGAGCCTGCCGTACTTGCCGTTGGACAGGGATGCGGTAGCCAAGCAC GGTGATTGTTCGGGTCGGCGTTATCGTGCGACTTGGAAGGTTATCGTGCA ATTTGGTGCAGAAAAGTTGCCGAACTTAATTCACCTGCCGGCCTTGTCAT GAACCGTTCCATGCAGTTGAAGAAGCCACTTTTCCTTCACGAGCGTGCGG CATTCGTCGATTTTTCGGAGGTGAGGAAGTCAGCGCATGTCCGCTTCGCT ACCCGAATAGTGGTGCTTTTGTGTTGTCCCAAAGTGCACTCTTTGAGCTG CTGAATTTGGTCCTCCAGCACTGAGTATATAGCAAAGATGTAAAGATTGA ATAAGGCCAGATAGATTGCCAAACCGACACCACCGACTGCTGAGTACCAC ACCCGATTTACTCTACGCTGGCGGCATGGCAGGTTCTACGGCGATACGAT GCCTCGCATGGTCTGCCTCCGTGCTTGGTGCATTGTTTTACTGGATCAGA GGAGGTAAAAGGGCTTGCTTGTCGTCAATATGCAAGGCCGGCTCTGTCCC TAGGATGGCGATCGCTTGTATTTCGTACGTTGGACTGGAGACATCTCTTT ATGTCAAGTCTATGGCGTTGTCGAGAGGATGGCTGCTGCTTACGAATGTT TCAATCAAGCGGTTTATTTCGTCTGGGGGGCCTTGGCACGTGGATTCGCT TCCTGACCCCGTACATTTTCTCCCCATCCCGACGTTTTCGTCCTTTTGCA CCGGGCTGCTGTGGCCACACTTAAAGGAGTTGATTGCGTACATTGAAATG GGCTTCTTCGTGAGCGTGGCTGGGGGTATCTGCAGGGAGAAGAGTGGGGC GGCACTTCGAGCAGCGGTGAGGGCCGCGGAAGCCGATCGTTGTAGGCACG CGATGCTGTCTTGTAGTCGATACTGGCTGAGGGCTTTCGACCGTGCTTAT AGCGGTAGTGCTGGGTTGTGATGAAGTGGCGTGTGGTTCACGACCTGTGT CATGAAAATATCAAAACGTGTCCGTCCTTTTTATATTTTTGAGCCCGAAC CTTGGAGAGGGCATGTTGCTCGTTTATTGTCGCTTCTCTCGGTGGCCATC GGTCGCATCGTACCCATCGTACTCAGTGATCTCGCTCTTTTTACTTTTCA GAGCCCTCTGCTATGGGATAATTATAGTTCACGGGCTCAATCTTTTCCAA ATCCCAGGTGAAGCGGATTCCGTTGGATAGGCTTATGGTTGAAACGGATG CACCTTATCTGGGCTTCTCGGGGTGCCGAAAGGGACACGACAAACCGAAG AAACAGGTACGATGGGTTTGGCTGATATACTGCTACAGTGTACGCAACCA CGCAGGCACCACATACCCACACCTCTGATTTCGGCAGAGGTTCGGAGACG TATCTCATCTAGAACATGAAGAGGAGGGAGCAACACTATCGTCCACGATT TGGGTCGCACAAATGGCATAGTGACAGCAAATACCATATCTACTTGTGTG GAGGTTTACGCGATCATGTCTGTGGATCCCAACTCCCAAGTGTTACAACA ATACCTACTCGATGTTGCGTTCGCTTCAAGATTATAGATGGATTCGTGTG TGACGTGCCGATTATTTGCTCAACGTGTAGTGTGGCATACATCCAGCCCT CTATCCCGCCTTGCGCTGACAAACGTGTCGCAACAACAAGTTCGTGTGGA ACCAGTTAGACTACGCAGCAGGTTGTTACAGTGTGATTCCAATAACCCTG TTTACAAACGTAATGAGTGGTAAATGGCAAATGAACCTTTTTTGTTGGTG TGCAGTTCGTTGGTGTGCTATGTAGACGCCGCCAAGTTAGCGAGACATGA GAGCATTCCACAGAAGGCTTTTATGCGCGAAACCCACAAGAGCCTGCCGA TGTGGAACACTGGTGCGTTCTTGCCGAGCCCCACCAATACCACGAAAAAC AAACGCGCCTTGTTCGTTCGGAGTCTCGTTTTTATGTTTTGACAACCCCC ACCCTCTTCTTTCGTTCGCGTCTTTGGGTCCATGCAGAATCCGAACGTAC CTTCCGCGCTACCAGCGGTGGTTCGGGTTGTGGCGGAATGTCTTGGTCTA CCGTTTGAGGAAGTTGCTCGGGCGACCCTACAGAACAGTCGACAATTTTT CGGGATGGCAACGCTTTAGTCGCCATTTTCGGGATGATAACAACGCTTTT GTTGCGAACAGTTGGGTGTCACTTCAGCAGCTGCCGCTTGAGGAAGTGTT TGCTTCAAGAAATGTTGGGATCAAAGTGCTCGCAAGTACGTAGCGGTCAT GTTACGGCTTGATATGGGTTCCCTGTCGGAATGTTCGCATGAGCGATAAG TGAAGACCAACGACATGCCCCTGCGCGCAACCAAAACCGCCGCCCCCGAG TGCCTTGCCTCTATCGTGGAAACATTGGAGTTGTCGTATTGCGCGCATTC GAGTACGGAGAACAAGAGATGGTTCCGTTTACCCCCGAGGCAGAAATTAC CTCTCCGGACAGGCTGGAGTGCTTGTTCAGAAACGGCCAACAAGGTTAAG ATTCCTTCTGGAAGATCCAGAGTCGCGTTCGTTGGGTATGGACTGCTCGT GGCAGATATGTCTTATCCGTTTGCCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig107:7671..12096+

>mRNA_E-siliculosus-1a_F_contig107.494.1 ID=mRNA_E-siliculosus-1a_F_contig107.494.1|Name=mRNA_E-siliculosus-1a_F_contig107.494.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1938bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig107:7671..12096+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGAACACCGGAGTGCTATTGGTCTCTTTTTGTCGCTTGCAGTCCACGT
GAATCGCCCGGCGGCAGCACTCAATACCCGCCTTCCTATCGGACGCGGGG
TTCGAGCACTTCACACAACAACCGCAGCAGCGGACGCAGGCGACACGAGC
AGTTATATCGTTGATGTCGATGCAAATCTGCTGCATGCCGACCTCTCCAA
CGACATCGACCATCACATACAGATGGAACACCGGAGTGCTATTGGTCTCT
TTTTGTCGCTTGCAGTCCACGTGAATCGCCCGGCGGCAGCACTCAATACC
CGCCTTCCTATCGGACGCGGGGTTCGAGCACTTCACACAACAACCGCAGC
AGCGGACGCAGGCGACACGAGCAGTTATATCGTTGATGTCGATGCAAATC
TGCTGCATGCCGACCTCTCCAACGACATCGACCATCACATACAGGTAGCC
TCTTCGGTTGGGGTGAAGCAATTCGTGGTACCTGGGAGCACAGTGGAAGA
CAGCCGGGGCTCTTTGGAACTGGCGCGACGAAAACCCAATGTAGCCTCTT
CGGTTGGGGTGAAGCAATTCGTGGTACCTGGGAGCACAGTGGAAGACAGC
CGGGGCTCTTTGGAACTGGCGCGACGAAAACCCAATGTTGTGTTTTCGAC
TGCTGGGGTCCATCCATACCACGTCCAGGGGTGCGGCTCGCTCGAGGATG
CCATGGCGAGCATCGCCACTCTCGCAGCAACTGAGGAAGGTTGTGTTTTC
GACTGCTGGGGTCCATCCATACCACGTCCAGGGGTGCGGCTCGCTCGAGG
ATGCCATGGCGAGCATCGCCACTCTCGCAGCAACTGAGGAAGCTCGTTGC
GTGGGAGAATGCGGTTTGGACTACTCAGAAGGCTTTCCCGCGGCCGAACT
GCAGCTGCCGTGGTTTGAGAGACAAGTTGAGCTTGCGTGCAAGCTCGTTG
CGTGGGAGAATGCGGTTTGGACTACTCAGAAGGCTTTCCCGCGGCCGAAC
TGCAGCTGCCGTGGTTTGAGAGACAAGTTGAGCTTGCGTGCAAGTTGAAG
AAGCCACTTTTCCTTCACGAGCGTGCGGCATTCGTCGATTTTTCGGAGTT
GAAGAAGCCACTTTTCCTTCACGAGCGTGCGGCATTCGTCGATTTTTCGG
AGGTTCTACGGCGATACGATGCCTCGCATGGTCTGCCTCCGTGCTTGGTG
CATTGTTTTACTGGATCAGAGGAGGTTCTACGGCGATACGATGCCTCGCA
TGGTCTGCCTCCGTGCTTGGTGCATTGTTTTACTGGATCAGAGGAGGAGT
TGATTGCGTACATTGAAATGGGCTTCTTCGTGAGCGTGGCTGGGGGTATC
TGCAGGGAGAAGAGTGGGGCGGCACTTCGAGCAGCGGAGTTGATTGCGTA
CATTGAAATGGGCTTCTTCGTGAGCGTGGCTGGGGGTATCTGCAGGGAGA
AGAGTGGGGCGGCACTTCGAGCAGCGGTGAAGCGGATTCCGTTGGATAGG
CTTATGGTTGAAACGGATGCACCTTATCTGGGCTTCTCGGGGTGCCGAAA
GGGACACGACAAACCGAAGAAACAGGTGAAGCGGATTCCGTTGGATAGGC
TTATGGTTGAAACGGATGCACCTTATCTGGGCTTCTCGGGGTGCCGAAAG
GGACACGACAAACCGAAGAAACAGAATCCGAACGTACCTTCCGCGCTACC
AGCGGTGGTTCGGGTTGTGGCGGAATGTCTTGGTCTACCGTTTGAGGAAG
TTGCTCGGGCGACCCTACAGAACAGTCGACAATTTTTCGGGATGGCAACG
CTTTAGAATCCGAACGTACCTTCCGCGCTACCAGCGGTGGTTCGGGTTGT
GGCGGAATGTCTTGGTCTACCGTTTGAGGAAGTTGCTCGGGCGACCCTAC
AGAACAGTCGACAATTTTTCGGGATGGCAACGCTTTAG
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