mRNA_E-siliculosus-1a_F_contig10.48.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 911 bits (2355), Expect = 0.000e+0 Identity = 529/642 (82.40%), Postives = 543/642 (84.58%), Query Frame = 2 Query: 158 MDENIATSTAQAKDNKTLPVYNNRTNDVPSTRSXXXXXXXXXXXXRAAPYSGQDQLDAQPASSSVSSESPALHALNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSAPQPSICKSSASQPGGPGVPVLSAPPSSSAYQTAVPPVQEPLIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGSAFRELAAATVKSPPPCSINKG--------------SSGASSSSSHPKPEKTSATRGQVLKRANRPGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAVYCISHKKGPMVQLFRETPALPNKAGHTESAAAPVATRKATTGKRSQGPAAXXXXXXX-SVGAKKTRAPSNIDRNG--KARRGPQETEQDNDADVSGTHRSKKRRS-GGKDERDAISSATVTKENLTKSTGKTSASSLPSPAPAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAADDGIEERDGEVRGEGGATTPRGSNLGW*KVSPEVLSAPSSKQHGSGQGN*SSVGRGQKPSKQARSTAVAESG 2029
MDEN ATSTAQ DN TLPVYNNRTNDVPSTRS R PYSGQDQLDAQ A+SSVSSESPALH LNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSA QPS GGPGV VLS PSS A+ TAVPP +EP IPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTT+R+GALFRATREG+AFR+LAAATVKSPPPCSINKG SSGASSSSSHPKPE+TS TRGQVLKRANR GISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRA+YC +HKK PMVQLF+E PALPNKAG+ ATTGKRSQGPAAXXXXXXX SVGA KTRAPSNIDRNG KARRGPQETE+DND D G H SKKRRS GGKDER ISSA VT ENLTK T KTSASSLP PAPA E NPP S NNRLADSSGMAPSVEFLVLRQARE AKTEAEASGLGRRPRAPSRRALEAAGRLKG GAQWMSREKKAEDLRLKAELR QRKQYQAAGLKSGVVLEMFVPAATGTEAA DGIE+RDGEVRGEGGATTPRGSN GW KVSPE LSAPSSKQHGSGQG SSVGR QKPSKQARSTAVAESG
Sbjct: 1 MDENKATSTAQPTDNNTLPVYNNRTNDVPSTRSSSSSPTSSCSSSRVTPYSGQDQLDAQLANSSVSSESPALHDLNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSASQPSXXXXXXXXXGGPGVRVLSTSPSSPAH-TAVPPAKEPPIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATVKSPPPCSINKGDLVASDQSRLPSTGSSGASSSSSHPKPEETSGTRGQVLKRANRQGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAMYCFAHKKAPMVQLFKELPALPNKAGN------------ATTGKRSQGPAAXXXXXXXXSVGANKTRAPSNIDRNGAKKARRGPQETEEDNDVDSGGKHTSKKRRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATGTEAAGDGIEQRDGEVRGEGGATTPRGSNPGWHKVSPEALSAPSSKQHGSGQGKGSSVGRRQKPSKQARSTAVAESG 629
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 838 bits (2164), Expect = 3.830e-299 Identity = 491/651 (75.42%), Postives = 520/651 (79.88%), Query Frame = 2 Query: 158 MDENIATSTAQAKDNKTLPVYNNRTNDVPSTRSXXXXXXXXXXXXRAAPYSGQDQLDAQPASSSVSSESPALHALNTPGQAAAAGTKEGSGPYPLRPRPTHGAVVKQALSIFKSSAPQPSICKSSASQPGGPGVPVLSAPPSSSAYQTAVPPVQEPLIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGSAFRELAAATVKSPPPCSINKG--------------SSGASSSSSHPKPEKTSATRGQVLKRANRPGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAVYCISHKKGPMVQLFRETPALPNKAGHTESAAAPVATRKATTGK-RSQGPAAXXXXXXXSV----------GAKKTRAPSNIDRNG--KARRGPQETEQDNDADVSGTHRSKKRRSGGKDERDAISSATVTKENLTKSTGKTSASSLPSPAPAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAADDGIEERDGEVRGEGGATTPRGSNLGW*KVSPEVLSAPSSKQHGSGQGN*SSVGRGQKPSKQARSTAVAESG 2029
MD+N+ATSTAQA D K LPVYN+RTND PSTRS RAAPYSGQDQ DAQPA+SSVSS PALHA+N PGQAAA G KEG GPYPLRPRPTHGAVVKQALS+ KSSA S PG G+PVLSA PSSSA+ T+VPP +E IP+ CQHRGCSNLARYGPLDSPP CQLHKRVGQFTT+R+GALFRATREG+AFR+LAAAT KSPPPCSINKG SSGA SSSSHPKP KTS TRGQVLKRANRPG+SGG+N SQSSR+ CLFPGCDARPDYGLPGATRAVYC SHKKGPMVQLF+ETPALP+ AG KATTGK RSQ P XXXXX GAKK RAP NIDRNG ARRG QETE+DN+AD SGTH+S+KR SGGKDER AISS+TVT ENLTK+T K +ASSLPSPAPAAE PP PNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELR QRK+YQAAGLKSGVVLEMFVPAATGTEAA DGIEERDGEVRGEGGATTP GSN GW KVSPE LSA S KQH +GQ SSVG GQKPSKQ R T VAESG
Sbjct: 1 MDDNVATSTAQATDKKKLPVYNHRTNDDPSTRSASLSSASSCSCSRAAPYSGQDQFDAQPANSSVSSNGPALHAINAPGQAAATGAKEGPGPYPLRPRPTHGAVVKQALSVLKSSA----------SHPGRAGMPVLSASPSSSAH-TSVPPAKELPIPVRCQHRGCSNLARYGPLDSPPCTCQLHKRVGQFTTNRHGALFRATREGNAFRKLAAATAKSPPPCSINKGNLAASDQSRLPSTGSSGAPSSSSHPKPGKTSGTRGQVLKRANRPGLSGGNNRESQSSRDSACLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDSAG------------KATTGKPRSQVPTESSXXXXXXXXXXXXXXXXXGAKKKRAPRNIDRNGAKNARRGRQETEEDNNADGSGTHKSEKRSSGGKDERGAISSSTVTGENLTKTTAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSNPGWQKVSPETLSAASPKQHSTGQRRESSVGTGQKPSKQVRPTTVAESG 628
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: D7G0U7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U7_ECTSI) HSP 1 Score: 579 bits (1493), Expect = 3.650e-201 Identity = 349/467 (74.73%), Postives = 361/467 (77.30%), Query Frame = 2 Query: 635 MHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGSAFRELAAATVKSPPPCSINKGSSGASSSSSHPKPEKTSATRGQVLKRANRPGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAVYCISHKKGPMVQLFRETPALPNKAGHTESAAAPVATRKATTGKRSQGPAAXXXXXXXSVGAKKTRAPSNIDRNG--KARRGPQETEQDNDADVSGTHRSKKRRSGGKDERDAISSATVTKENLTKSTGKTSASSLPSPAPAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAADDGIEERDGEVRGEGGATTPRGSNLGW*KVSPEVLSAPSSKQHGSGQGN*SSVGRGQKPSKQARSTAVAESG 2029
M CQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDR+GALFRATREG+AFRELAAATVKSPPPCSI KGSSG SSSSSHP P +TSATRG C+ARPDYGLPGATRAVYC SHKKGPMVQLF+E P+LPNKAG ESAAAPV TRKATTGKRSQGPA XXXXXXXSVGAKKTRAPS+IDRNG KARRG QETE+DNDADVSGTHRSKKRRSGGKDER AISSA VTKENLTK+T KTSA SLPSPAPAAEANPP SPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLR+KAELRQQRKQYQ KVSPE LSAP SKQHG+GQ +SVGRGQKPSKQARSTAVAESG
Sbjct: 1 MRCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRHGALFRATREGNAFRELAAATVKSPPPCSIFKGSSGRSSSSSHPMPGRTSATRG-------------------------------CEARPDYGLPGATRAVYCFSHKKGPMVQLFKEPPSLPNKAGQAESAAAPVVTRKATTGKRSQGPAXXXXXXXXSVGAKKTRAPSDIDRNGSKKARRGQQETEEDNDADVSGTHRSKKRRSGGKDERGAISSAQVTKENLTKTTAKTSAPSLPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRVKAELRQQRKQYQ---------------------------------------------------KVSPEALSAPYSKQHGTGQRKETSVGRGQKPSKQARSTAVAESG 385
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 572 bits (1474), Expect = 3.310e-198 Identity = 335/419 (79.95%), Postives = 344/419 (82.10%), Query Frame = 2 Query: 782 AFRELAAATVKSPPPCSINKGSSGASSSSSHPKPEKTSATRGQVLKRANRPGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAVYCISHKKGPMVQLFRETPALPNKAGHTESAAAPVATRKATTGK-RSQGPAAXXXXXXXSVGAKKTRAPSNIDRNG--KARRGPQETEQDNDADVSGTHRSKKRRSGGKDERDAISSATVTKENLTKSTGKTSASSLPSPAPAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAADDGIEERDGEVRGEGGATTPRGSNLGW*KVSPEVLSAPSSKQHGSGQGN*SSVGRGQKPSKQARSTAVAESG 2029
AFRELAAATVKSPPPCSINKG ANRPG+SGGHNGGSQSSRNR+CLFPGCDARPDYGLPGATRAVYC SHKKGPMVQLF+ETPALP+ G KATTGK RSQ P SVG K RAPSNIDRN KARRG QETE+DNDADVSGTHRSKKR SGGKDER AISS+TV ENLTK+T KTSA S PSPAPAAEANPP SPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVP ATGTEAA DGIEERDGEVRGEGGATT RGSN GW KVSPEVLSAPSSKQHG+GQ +SVGRGQKPSKQARSTAVAESG
Sbjct: 11 AFRELAAATVKSPPPCSINKG--------------------------ANRPGLSGGHNGGSQSSRNRSCLFPGCDARPDYGLPGATRAVYCFSHKKGPMVQLFKETPALPDNPG------------KATTGKPRSQAPT-EPAAAAASVGTKNPRAPSNIDRNAAKKARRGQQETEEDNDADVSGTHRSKKRSSGGKDERGAISSSTVAGENLTKTTAKTSAPSFPSPAPAAEANPPSSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATGTEAAGDGIEERDGEVRGEGGATTLRGSNPGWQKVSPEVLSAPSSKQHGTGQREETSVGRGQKPSKQARSTAVAESG 390
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: A0A6H5KLI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI4_9PHAE) HSP 1 Score: 263 bits (673), Expect = 2.770e-75 Identity = 200/462 (43.29%), Postives = 251/462 (54.33%), Query Frame = 2 Query: 641 CQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGSAFR--------------------ELAAATVKSPPPCSINKGSSGASSSSSHPKPEKTSATRGQVLKRANRPGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAVYCISHKKGPMVQLFRETPALPNKAGHTESAAAPVA--TRKATTGKRSQGPAAXXXXXXXSVGAKKTRAPSNIDRNGKARRGPQETEQDNDADVSGTHRSKKR-------------RSGGKDERDAISSATVTKENLTKSTGKTSASSLPSPA--PAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAADDGIEERDGEVRGEGGATTPRGSNLGW*KVSPEV 1915
C++ GC A+YG ++PP CQ HKR GQ+TT+R+G L ATR+G AFR E+A S P + GSSG SS SH KP++ ++ LKR NRPG S + S + +NR+CLFPGC ARP +GLPGA RAVYC SHKKG MV LF E A+ N + ++AAP +K T K+ + GAK+ R S+I K T +D+ G HR K+ SGG A ++A T E KS S A PA PP P +R +D GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE R+ +ELR++RK+ + AGLK GVVLE FVP A A E G +RG+G R +V+ E+
Sbjct: 115 CEYPGCPKSAKYGLREAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSEIAGTEAASARPRRRSTGSSG-SSVPSHRKPKENLSSSVHTLKRKNRPGTSSSRHEESPAPKNRSCLFPGCGARPTHGLPGAARAVYCFSHKKGSMVDLFSEALAVNNHEEKSVTSAAPTEGKKKKQTQAKKER---EMTGMTADQRGAKQARRESSIMEGNKGT-----TSKDD-----GGHRGAKKIRDNETKVNRGMGASGGSVGAIATAAAAGTSEMSVKSPAAKPLVKSTSEAKEPADTTAPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFVPRAPSRRAL-----EASGRLRGDGAQWMTREKKAEQARVNSEL 555
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: A0A6H5KYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF0_9PHAE) HSP 1 Score: 253 bits (645), Expect = 4.470e-73 Identity = 200/465 (43.01%), Postives = 251/465 (53.98%), Query Frame = 2 Query: 527 SSASQPGGPGVPVLSAPPSSSAYQTAVPPVQEPLIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGSAFR--------------------ELAAATVKSPPPCSINKGSSGASSSSSHPKPEKTSATRGQVLKRANRPGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAVYCISHKKGPMVQLFRETPALPNKAGHTESAAAPVATRKATTGKRSQGPAAXXXXXXXSV-----GAKKTRAPSNIDRNGKARRGPQETEQDNDADVSGTHR-------SKKRRSGGKDERDAISSATVTKENLTKSTGKTSASSLPSPA-------------PAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFV 1786
SS+ PG +S PP+S++ + Q P P C++ GC A+YG D+PP CQ HKR GQ+TT+R+G L ATR+G AFR E+A S P + GS+G SS SH KP+ ++ LKR +RPG S + S++ + +CLFP C ARP YGLPGA RA YC SHKKG MV LF E PA+ N + AAP T GKR + + GAKK R S+I + K T +D+ G HR +K + +GG +A A VT + TS S SPA PA PP P +R +D GMAPSVE L+LRQARE AKTEAEASG GRRPRAPSRRALEA+GRL+G GAQWM+REKKAE R+ +ELR++RK+ + AGLK GVVLE FV
Sbjct: 27 SSSLSPGVSPASSMSPPPTSTSSPKTL---QAPTAP-RCEYPGCPKSAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVPAVTVPPSPASSEIAGTEAASAQPRRRSTGSTG-SSVPSHRKPKAKLSSSVHALKRKSRPGTSSSRHEESRAPQYHSCLFPECGARPIYGLPGAARAAYCFSHKKGSMVDLFSEAPAVNNHEAKRVTPAAP------TEGKRKKQKKGHEERKMTGMTADQRGAKKARRESSIKEDNKGA-----TSKDD-----GGHRGAKKIRDNKTKVNGGMGASEASVGAIVTA-----AAAGTSEMSTKSPAAKPSVKPTRKVKEPADTIVPPPQPTSRPSD--GMAPSVEMLILRQAREAAKTEAEASGSGRRPRAPSRRALEASGRLRGDGAQWMTREKKAEQARVNSELRKKRKESREAGLKVGVVLEAFV 463
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: D8LGW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW8_ECTSI) HSP 1 Score: 249 bits (635), Expect = 1.270e-71 Identity = 202/455 (44.40%), Postives = 252/455 (55.38%), Query Frame = 2 Query: 527 SSASQPGGPGVPVLSAPPSSSAYQTAVPPVQEPLIPMHCQHRGCSNLARYGPLDSPPRACQLHKRVGQFTTDRYGALFRATREGSAFR--------------------ELAAATVKSPPPCSINKGSSGASSSSSHPKPEKTSATRGQVLKRANRPGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAVYCISHKKGPMVQLFRETPALPNKAGHTESAAAPVATRKATTGKRSQGPAAXXXXXXXSV-----GAKKTRAPSNIDRNGKARRGPQETEQDND----ADVSGTHRSKKRRSGGKDERDAISSATVTKENLTKSTGKTSASSLP------SPAPAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFV 1786
SS+ PG LS PP+S++ + + P C++ GC A+YG D+PP CQ HKR GQ+TT+R+G L ATR+G AFR E+A S P + GSSG S SH KP+ ++ LKR NRP S + S + +NR+CLFPGCDARP YGLPGA RAVYC SHKKG MV LF + PA+ N +A AP T GKR + XXXXXXXS+ GAKK R S+I + K T +D A + K R G ER + AT ++ + K+SA+ P + PA P P NR S GM+PSVE L+LRQARE AK EAEASG GRR RAPSRRALEA+GRL+G GAQWM+REK+AE R+ ELR++RK+ + AGL GVVLE FV
Sbjct: 27 SSSLSPGVSPTSSLSPPPTSTSSPKTLLAPKAP----RCEYPGCPKYAKYGLRDAPPSKCQAHKRAGQYTTNRHGELLMATRDGDAFRTPAVAVPVLAVTVPPSPASSEIAGMEAASAQPRRRSTGSSG-SLVPSHRKPKAKLSSSVHTLKRKNRPEPSSSGHEESPALQNRSCLFPGCDARPTYGLPGAARAVYCFSHKKGSMVNLFSQAPAVNNNEEKRVTAVAP------TEGKRKKXXXXXXXXXXXSMTADQRGAKKARRESSIKEDNKGA-----TSKDGGGYQGAKKIRDNEKKVNRGVGTSERSVGAIATAAAAGTSEMSTKSSAAKPPVKSTHIAKEPADTMALPPQPTNR--PSEGMSPSVEMLILRQAREAAKKEAEASGGGRRARAPSRRALEASGRLRGDGAQWMTREKRAEQARVNTELREKRKKSREAGLTVGVVLEAFV 463
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 197 bits (500), Expect = 2.520e-53 Identity = 171/381 (44.88%), Postives = 202/381 (53.02%), Query Frame = 2 Query: 764 ATREGSAFR--------------------ELAAATVKSPPPCSINKGSSGASSSSSHPKPEKTSATRGQVLKRANRPGISGGHNGGSQSSRNRTCLFPGCDARPDYGLPGATRAVYCISHKKGPMVQLFRETPALPNKAGHTESAAAPVATRKATTGKRSQGPAAXXXXXXXSV-----GAKKTRAPSNIDRNGKARRGPQETEQDNDADVSGTHRSKKRRSGGKDERD-------------AISSATVTKENLTKSTGKTSASSLPSPA--PAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFV 1786
ATR+G AFR E+A S P + GSSG S S KP+ ++ LKR NRPG S + S + +NR CLFPGC ARP YGLPGA AVYC SHKKG MV LF PA+ N H E P A T GKR XXX + GAKK R S+I + K T +D+ G HR K+ G + + + A ++A T E TK L S A PA PP P +R S GMAPSVE L+LRQARE AKTEAEASG GRR RAPSRRALEA+G+LKG GAQWM+REKKAE R+ ELR++RK+ + AGLK GVVLE FV
Sbjct: 2 ATRDGDAFRTPAVAVPVPAVTVPLSPASSEIAGTEAASAQPRRRSTGSSGPSVPSQC-KPKAKLSSSVHTLKRKNRPGTSSSGHEESPAPQNRPCLFPGCGARPIYGLPGAAHAVYCFSHKKGSMVNLFSRAPAVNN---HEEKMVTPAAP---TEGKRKXXXXXXXXRKMTGMTADQRGAKKARRESSIKEDNKGA-----TSKDD-----GGHRGAKKNRGNETKVNRGTGASEGSVGDVATAAAAGTSEMSTKLPAAKPLVKLTSKAEEPADTMAPPPQPTSR--PSEGMAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEAFV 363
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE) HSP 1 Score: 191 bits (486), Expect = 8.460e-52 Identity = 129/269 (47.96%), Postives = 172/269 (63.94%), Query Frame = 2 Query: 1238 TRAPSNIDRNG-----KARRGPQETEQDNDADVSGTHRSKKRRSGGKDERDAISSATVTKENL-TKSTGKTSASSLPSPAPAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAADDGIEERDGEVRGEGGATTPRGSNLGW*KVSPEVLSAPSSKQHGSGQGN*SSVGRGQKPSKQARSTAVAES 2026
TRAPS++D+ G ++R+ + + D + + + ++ +GGKD R S T+E+L T + +T+ SSLPSP AA P SP NR D++GMAPSVEF +LRQARE AK EA SG GRRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R+KAELR+QR+QY+AAG KSGVVLE FV A GT DG+ G G ATT G + W KVSPE+L+A + ++ + + S ++PSK+ R A S
Sbjct: 29 TRAPSSVDKTGANNAWQSRKAKNDGYSTDGGDKNSSSKKRRGSNGGKDNRGEASKGNATREDLPTTVSVETTVSSLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGGVAGKIGVGSATTKHGRDPAWQKVSPEMLAASAEQEQATEKEELLSASAEKRPSKRPRPPAAPNS 297
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI) HSP 1 Score: 192 bits (488), Expect = 1.620e-51 Identity = 140/271 (51.66%), Postives = 176/271 (64.94%), Query Frame = 2 Query: 1241 RAPSNIDRNG--KARRGPQETEQDNDADVSGTHRSKKRR---SGGKDERDAISSATVTKENL-TKSTGKTSASSLPSPAPAAEANPPFSPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPAATGTEAADDGIEERDGEVRGE---GGATTPRGSNLGW*KVSPEVLSAPSSKQHGSGQGN*SSVGRGQKPSKQARSTAVAES 2026
RAPSN+D+ G KA +G + T+ + D + S K+R +GGKD R +S T+E+L T + +T+ SSL SP AA P SP NR D++GMAPSVEF +LRQARE AK EA ASG GRRPRAPSRRALEA+G+LK GAQWM+RE+KAE+ R KAELR+QR+QY+AAGLKSGVVLE FV A GT A DG+ G V GE G ATT G + W KVSP +L+A ++ + Q S ++PSK+ R A S
Sbjct: 80 RAPSNVDKTGANKAWQGRKATKDRDSTDGGDKNSSSKKRRGSNGGKDNRGEVSKVNATREDLPTTVSVETTVSSLRSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGV---GGGVAGELGVGSATTKHGRDPAWQKVSPGILAASPEQEQATEQEETLSPSS-ERPSKRPRPPAAPNS 346 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 15 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10.48.1 >prot_E-siliculosus-1a_F_contig10.48.1 ID=prot_E-siliculosus-1a_F_contig10.48.1|Name=mRNA_E-siliculosus-1a_F_contig10.48.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=580bp MDENIATSTAQAKDNKTLPVYNNRTNDVPSTRSSSSSSASSCSSSRAAPYback to top mRNA from alignment at E-siliculosus-1a_F_contig10:130731..139588+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig10.48.1 ID=mRNA_E-siliculosus-1a_F_contig10.48.1|Name=mRNA_E-siliculosus-1a_F_contig10.48.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8858bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:130731..139588+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10:130731..139588+ >mRNA_E-siliculosus-1a_F_contig10.48.1 ID=mRNA_E-siliculosus-1a_F_contig10.48.1|Name=mRNA_E-siliculosus-1a_F_contig10.48.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3480bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:130731..139588+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |