mRNA_E-siliculosus-1a_F_contig1068.483.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: D7FSX8_ECTSI (Ubiquitin carboxyl-terminal hydrolase 64E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX8_ECTSI) HSP 1 Score: 2553 bits (6616), Expect = 0.000e+0 Identity = 1699/1969 (86.29%), Postives = 1717/1969 (87.20%), Query Frame = 1
Query: 1 RYLQVFKPRLDKFIKDHADVFMLQETETSGVEVLLLHRPGGGEGDSAEPPAGNAAESGVGGGPGADGSDPELEEVLRLSLQQQSAGQQSLAPANGTALADTAGDGXXXXXXXSAASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENHSLKTVKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLNPSSSSLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSDMGRARLSELTAHGPGMYLSKHLPDQSGHQANSPRXXXXXXXXXXXXXXXXXXDAGATSTATVPTLGDLDWGQPEGPLVLLWDGRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQPAWIDNILEQAGGFGRVPERRGSRAETSQTWRDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVSPDYLGSGRKRASGRGGGGAGASQMEAVQIAGPSGVFEEWKSSGVAGKGGAAAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVENLRSHSLPLAHDVAVATHEGQRVLLNLECDVHATSIPHLKALCLLGLVPALKENAIPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGNALDESSTGASLFATRITEGAQLMLQWGAPPATGKALVKFYVRVGNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMIKKAAEMTYIVEDDQERRIRLEALLGDSNTLVEELKDATDATAXXXXXXXXXXXXXXXXKPSKTNDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAAGEEGREKPEGGTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADKGAVTDDNDTGHKVDVDGPLFQSRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADANVGDGNGDGKAADPADTARGNAAAAGGGKSALQNRSSNPSSKVARGGGGAKGEGGEAG-SVPTGLSPSAVWPDEEAAWKKGDVERFRGDPVRLLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKATKASMAEAMRAAKEAXXXXXXXXXXXXAQAEGRFCEYVANLLRTGVGGDADGEVMDANELEDIRKIMMMKNNKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AGETAVPGTVDAPNGLGSSSANCSAFAGEGGADKLAASIDREGVKEVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLYSSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLEDMQNKRGVDIRALDLGWLTYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSMRTAVEKMKRSVKKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDNAGIAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNANSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASASEHGKXXXXXXXXXXXXK---PASKRAVPEVGLTLGG-DWDDGXXXXXXXXXXXXXXXSDMRF 5883
R+ +VFKPRLDKFIKDHADVFMLQETET+GVEVLLLHRPGGGEGD+AEPPAGNAAESGVGG PGADGSDPELEEVLRLSLQQQSAG QSLAPANGTALADTAGDG XXXX AASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEG ETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTEN SLKT KDSKEADLHGIKVTVWVPKLLQVQMPHLVPL+PSSS+LDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSDMGRARLSELTAHGPGMY SKHLPDQ GH+ANSPR XXXXXXXXXXXXXXXXXDAGATSTATVPTLGDLDW QPEGPLVLLW+GRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQ AWIDNILEQAGGFGRVPERRGSRAETSQTW DLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAV+PDYL SGRKRAS RGGGGAGA QMEAVQIAGPSGVFEEW+SSG+AGKGG+ AELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLV+ LRSHSLPLAHDVAVATHEGQRVLL+LECDVHATSIPHLKA CLLGLVPALKEN IPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGN LDESSTGASLFATRI+EGAQLMLQWGAPPATGKALVKFYVRVGNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARM+KKAAEMTYIVED XXXXXXXXXXXXX KPEGG EGXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX KGA TDDN HKVDVDGPLFQ RLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAAD KAADPAD ARGN SVPTGLSPSAVWPDEEAA KKGDVERFRGDPVRLLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKATKASMAEAMRAAKEA XXXXXXXXXX GEVMDANELEDIRKIMMMKNNK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGET VPGTVDAPNGLGSSSANCSA AGEGG DKLAASIDRE VKEVKEE ADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNL SSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLEDMQ KR VDIRAL+LGW TYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSM+TAVE KTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDNAGIAIAAAQLKSNREQESIAMEKE DKELEASDWGVPKARGNANSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEA EHGK XXXXX PASKRAVPEVGLTLGG DWDDGXXXXXXXXXXXXXXXSDMRF
Sbjct: 614 RWDKVFKPRLDKFIKDHADVFMLQETETNGVEVLLLHRPGGGEGDAAEPPAGNAAESGVGGAPGADGSDPELEEVLRLSLQQQSAGHQSLAPANGTALADTAGDGGXXXXKGLAASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGAETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENDSLKTAKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLDPSSSNLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSDMGRARLSELTAHGPGMYPSKHLPDQPGHRANSPRRXXXXXXXXXXXXXXXXXDAGATSTATVPTLGDLDWDQPEGPLVLLWEGRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQSAWIDNILEQAGGFGRVPERRGSRAETSQTWSDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVAPDYLDSGRKRASERGGGGAGAPQMEAVQIAGPSGVFEEWQSSGLAGKGGSGAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVDTLRSHSLPLAHDVAVATHEGQRVLLHLECDVHATSIPHLKAFCLLGLVPALKENTIPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGNTLDESSTGASLFATRISEGAQLMLQWGAPPATGKALVKFYVRVGNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMVKKAAEMTYIVEDXX--------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXKPEGGAEGXXXXXXXXXXXXXXASKXXXXXXXXXXXXXXXXXDGIPXXXXXXXXXXXXXXXXXXKGAATDDNGNKHKVDVDGPLFQDRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADXXXXXXXXXXKAADPADPARGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPTGLSPSAVWPDEEAARKKGDVERFRGDPVRLLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKATKASMAEAMRAAKEAQAXXXXXXXXXXX------------XXXXXXXXXXXGEVMDANELEDIRKIMMMKNNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETTVPGTVDAPNGLGSSSANCSAAAGEGGGDKLAASIDREWVKEVKEERADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLCSSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NLEDMQKKRDVDIRALELGWTTYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSMKTAVEXXXXXXXKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDNAGIAIAAAQLKSNREQESIAMEKETDKELEASDWGVPKARGNANSSGKKGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEAYR-EHGKGQAKTKKXXXXXXXXXPASKRAVPEVGLTLGGGDWDDGXXXXXXXXXXXXXXXSDMRF 2488
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A6H5JDC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDC1_9PHAE) HSP 1 Score: 1324 bits (3426), Expect = 0.000e+0 Identity = 1052/1237 (85.04%), Postives = 1064/1237 (86.01%), Query Frame = 1
Query: 2275 GNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMIKKAAEMTYIVEDDQERRIRLEALLGDSNTLVEELKDATDATAXXXXXXXXXXXXXXXXKPS--------KTNDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDAAGEEGREKPEGGTEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADKGAVTDDNDTGHKVDVDGPLFQSRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADANVGDGNGDGKAADPADTARGNAAAAGGGKSALQNRSSNPSSKVARGGGGAKGEGGEAGSVPTGLSPSAVWPDEEAAWKKGDVERFRGDPVR---------------------LLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKATKASMAEAMRAAKEAXXXXXXXXXXXXAQAEGRFCEYVANLLRTGVGGDADGEVMDANELEDIRKIMMMKNNKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAVPGTVDAPNGLGSSSANCSAFAGEGGADKLAASIDREGVKEVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLYSSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLEDMQNKRGVDIRALDLGWLTYNKASKNNRSPEQDRSMKAWKKELNARKERIDNTHLKEERPLDKEVKSMRTAVEKMKRSVKKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDTPDDNAGIAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNANSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFWRKNPLGDGGTLPIDEPEWPGPLKEVIVEDVSQPTLDNLHEALGKAYGIPATRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASAS---EHGKXXXXXXXXXXXXK--PASKRAVPEVGLTLGGDWDDGXXXXXXXXXXXXXXXSDMRF 5883
GNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMIKKAAEMTYIVEDDQERRIRLEALLGDSNTLVEELKDATDAT XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDA GE XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DKGAVTDDN GHKVDVDGPLFQ RLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADANVG+GNGDGKAADPAD ARGNAA K + G VPTGLSPSAVWPDEEAA KKGDVERFRGDPVR LLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKA KASMAEA+RAAKE AQ DADGEVMDANELEDIRKIMM KNNKN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AGET VPGTVDAPNGLGSSSANCSA AG+G DK AASIDR+GV+EVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNL SSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGD XXXXXXXXXXXXXXXXXXXXXXXXXXXX NLEDMQ KR VDIRALDLGW TY+KA KN RSPEQDR MK WKKELNARKERIDN HLKEERPLDKEVKSM+TAVEKMKRS+KKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDD PDDNA IAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTF RKNPLGDGGTLPIDEPEWPGPLKEVIVE+VSQPTLDNLHEALGKAYGIPA+RVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASAS EHGKXXXXXXXXXXXX PASKRA+PEVGLTLGGDWDDGXXXXXXXXXXXXXXXSDMRF
Sbjct: 21 GNSTATARDPTRSGSTFGPLEVIADLKEPVSALKARMIKKAAEMTYIVEDDQERRIRLEALLGDSNTLVEELKDATDATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDA-GEXXXXXXX--XXXXXXXXXXXEKEAGAASKTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKGAVTDDNGDGHKVDVDGPLFQDRLVEESGILGGQEIYLEDGRVPRPRELEITVLAYAPHFLGLAAAAAAERLKAKVSQISEISDAAADANVGNGNGDGKAADPADPARGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXKVGLVPTGLSPSAVWPDEEAARKKGDVERFRGDPVRVGVFFSGGETTQQGYISRQIRLLSLQRQLSMRTLGHFHIDERRSLTELRAILRGLLSEGLSKAMKASMAEAIRAAKE-------------AQXXXXXXXXXXXXXXXXXXQDADGEVMDANELEDIRKIMMRKNNKNPSKTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AGETTVPGTVDAPNGLGSSSANCSAAAGQGEGDKSAASIDRQGVEEVKEEHADSDDEIPLPEGMPGFQTLEEAMLVRELRKDRLPGKIIRSSDVGGNTAGGLFVGQTISELNLCSSVALVLCLRPRLPQTPLVQEASMSRREKLAEELLENGQANGDHGTXXXXXXXXXXXXXXXXXXXXXXXXXXXX-NLEDMQKKRDVDIRALDLGWTTYSKALKNTRSPEQDRLMKTWKKELNARKERIDNAHLKEERPLDKEVKSMKTAVEKMKRSIKKTEKEEDREKAAAQGLESASIFTRVKGVLFSGAKATFGFGRTDDAPDDNASIAIAAAQLKSNREQESIAMEKEMDKELEASDWGVPKARGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMASPETTLADLLRKREDEVERRRTDPVTDLHLWTFCRKNPLGDGGTLPIDEPEWPGPLKEVIVENVSQPTLDNLHEALGKAYGIPASRVRAIKHNWGKHQWVRLTREMGIKKMKKGKKGKRLVTNLREAPYSFKDGDVVAVVDKMEDESGEADLARADDEASASAYREHGKXXXXXXXXXXXXXXXPASKRAMPEVGLTLGGDWDDGXXXXXXXXXXXXXXXSDMRF 1238
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A6H5JBH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH2_9PHAE) HSP 1 Score: 680 bits (1755), Expect = 2.830e-222 Identity = 368/398 (92.46%), Postives = 376/398 (94.47%), Query Frame = 1
Query: 1090 AGATSTATVPTLGDLDWGQPEGPLVLLWDGRRIDGVEVPDPGPETRPIRLVVSVLKASEDMDQPAWIDNILEQAGGFGRVPERRGSRAETSQTWRDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVSPDYLGSGRKRASGRGGGGAGASQMEAVQIAGPSGVFEEWKSSGVAGKGGAAAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVENLRSHSLPLAHDVAVATHEGQRVLLNLECDVHATSIPHLKALCLLGLVPALKENAIPSSQIQALLPXXXXXXRGTAAAPASGAKEELALVGLVKTVRLENTKSGNALDESSTGASLFATRITEGAQLMLQWGAPPATGKALVKFYVRVGNS 2283
+GATSTATVPTLGDLDWGQPEGPLVLLWDGRRIDGVEVPDPGP TRPIRLVVSVLKASED+DQ AWIDNILEQAGGFGRVPERRGSRAET W DLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAV+PDYLGSGRKRAS RGGGGAGASQMEAVQIAGPSGVFEEWK GGA AELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVE LRSH LPLAHDVAVATHEGQRVLLNLECDVHATS+PHLKALCLLGLVPALKENA+PSSQIQALLP XXXX RGTA APASGAKEELALVGLVKTVRLE+TKSGNALDESSTGASLFA R+T+GAQLMLQWGAPPATGKALVKFYVRVG S
Sbjct: 56 SGATSTATVPTLGDLDWGQPEGPLVLLWDGRRIDGVEVPDPGPGTRPIRLVVSVLKASEDIDQSAWIDNILEQAGGFGRVPERRGSRAET---WSDLYTRAGVTASEVVELVSNRGPAEVSTSKMCISLLRNFSSAVTPDYLGSGRKRASERGGGGAGASQMEAVQIAGPSGVFEEWK-------GGAGAELAGLELSEGSELLVEEQGAVNKLIAMTEFSSLAEMEAARRSRLVRVEVEVDDDLVETLRSHGLPLAHDVAVATHEGQRVLLNLECDVHATSVPHLKALCLLGLVPALKENAVPSSQIQALLPPXXXXARGTATAPASGAKEELALVGLVKTVRLEDTKSGNALDESSTGASLFAARVTDGAQLMLQWGAPPATGKALVKFYVRVGES 443
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A6H5JBL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL7_9PHAE) HSP 1 Score: 230 bits (587), Expect = 3.630e-60 Identity = 133/171 (77.78%), Postives = 138/171 (80.70%), Query Frame = 1
Query: 1 RYLQVFKPRLDKFIKDHADVFMLQETETSGVEVLLLHRPGGGEGDSAEPPAGNAAESGVGGGPGADGSDPELEEVLRLSLQQQSAGQQSLAPANGTALADTAGDGXXXXXXXSAASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSL 513
R+ +VFKPRLDKFI DHADVFMLQETETSGVEVLLLHRPGGGEGD+AEPPAGNA PGADG QQSLAPANGTALADT GDGXXXXXXX ASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEG ETAYLLIYRSR++
Sbjct: 473 RWDKVFKPRLDKFIMDHADVFMLQETETSGVEVLLLHRPGGGEGDAAEPPAGNAXXXXXXXAPGADG-------------------QQSLAPANGTALADTVGDGXXXXXXXXXASKAVPPGAVDALASEKHGRWFSFDDRKVTPISIRDLQKPFEGAETAYLLIYRSRNI 624
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: UPI000BA83342 (ubiquitin carboxyl-terminal hydrolase 40-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA83342) HSP 1 Score: 61.6 bits (148), Expect = 2.020e-5 Identity = 48/176 (27.27%), Postives = 78/176 (44.32%), Query Frame = 1
Query: 385 SEKHGR-WFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENHSLKTVKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLNPSSSSLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFC 909
++K G WF F+D +V+PI +RD++K F G E+AY+L YR +SL R L G + + + P +D V EN L+ +++ E L+ I V + Q L PL + S +D L +D R+T+ L+ +++ E C
Sbjct: 469 NQKFGHNWFDFNDSRVSPIYVRDIEKQFSGRESAYMLFYRRKSLQ--------------------------RPLEGRGNPSYLIPQKLIDLVKQENEELQKQREAYEVALNTITVQIHFSVNHQYHQGALHPLKDALSVVD-----------LKIDYRKTLTCLRSAIMELSQELC 607
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A812JQY0_9DINO (USP40 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812JQY0_9DINO) HSP 1 Score: 61.2 bits (147), Expect = 3.260e-5 Identity = 38/134 (28.36%), Postives = 64/134 (47.76%), Query Frame = 1
Query: 382 ASEKH-------GRWFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSLDQEAGS-----PVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENHSLKTVKDSKEADLHGIKVTVWVPKL 747
ASE H G WF+F+D V+ + + D+ FEG+ AYLL+YRSR+++Q A + P + +A A++ VPP YW ++ E+ +L +D E + +++ V P +
Sbjct: 929 ASELHEQLAAQWGNWFAFNDSSVSAVGLHDVASGFEGSSCAYLLMYRSRTVEQTAAASRGEGPAAAGSLAPAIA------------------QPVPPEYWSRRIMRESDALARQRDRYEMKRNQVRLWVHSPSM 1044
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Match: A0A8C4S322_ERPCA (Ubiquitin specific peptidase 40 n=4 Tax=Polypteridae TaxID=8289 RepID=A0A8C4S322_ERPCA) HSP 1 Score: 60.5 bits (145), Expect = 5.260e-5 Identity = 56/207 (27.05%), Postives = 91/207 (43.96%), Query Frame = 1
Query: 397 GRWFSFDDRKVTPISIRDLQKPFEGTETAYLLIYRSRSLDQEAGSPVSPADIAAAVSASSAGSGGPRNLPGGLHMTSVPPSYWMDKVDTENHSLKTVKDSKEADLHGIKVTVWVPKLLQVQMPHLVPLNPSSSSLDQLPEALRSPLVLHLDDRQTVKDLKKEVVKRLGEFCREMGVSDMGRARLSELTAHG---PGMYLSKHLPDQS 1008
G+WF F+D V PI I+D+QK FEG E+AY+L YR L + + + +P P++ +++ + EN L+ ++ + + I++ V Q H N + DQ+ L LH D R+TV+DL++ + ++LG D G SELT G++L HL D +
Sbjct: 446 GQWFDFNDSIVLPIQIKDIQKQFEGKESAYMLFYRKSCLKRPSDARKNPKFKV--------------------------PAHLIEETEQENMKLQKLRADFDLAKNLIEIHVH-----QGSKYHFF--NGALHPFDQITSILN----LHFDKRKTVRDLREVIYQQLGS-------KDDG----SELTFAKRLPAGLHLYDHLTDDN 604 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1068.483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1068.483.1 >prot_E-siliculosus-1a_F_contig1068.483.1 ID=prot_E-siliculosus-1a_F_contig1068.483.1|Name=mRNA_E-siliculosus-1a_F_contig1068.483.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1941bp MLQETETSGVEVLLLHRPGGGEGDSAEPPAGNAAESGVGGGPGADGSDPEback to top mRNA from alignment at E-siliculosus-1a_F_contig1068:12430..37156- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1068.483.1 ID=mRNA_E-siliculosus-1a_F_contig1068.483.1|Name=mRNA_E-siliculosus-1a_F_contig1068.483.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=24727bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1068:12430..37156- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1068:12430..37156- >mRNA_E-siliculosus-1a_F_contig1068.483.1 ID=mRNA_E-siliculosus-1a_F_contig1068.483.1|Name=mRNA_E-siliculosus-1a_F_contig1068.483.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=11646bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1068:12430..37156- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |