prot_E-siliculosus-1a_F_contig10670.481.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10670.481.1
Unique Nameprot_E-siliculosus-1a_F_contig10670.481.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length154
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10670.481.1 vs. uniprot
Match: D8LN65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN65_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 9.120e-100
Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0 
Query:   10 VKYQPNGERSEVTQYMYLRFRRGGNVHGVGYEESRKLCKITGKYKLNTRMNQTALALQCKFSNECDTVLFHGWGNGTGLVGNCYVREIDPFSALSGIPGIRQLSRDKYKGSFLMLKQAGMGGAKLRSMVHTRRVHKWAGACFPDD 154
            VKYQPNGERSEVTQYMYLRFRRGGNVHGVGYEESRKLCKITGKYKLN R NQTALALQCKFSNECDTVLFHGWGNGTGLVGNCY+REIDPFSA SGIPGIRQLSRDKYKGSFLMLKQ+GMGGAKLRSMVHTRRVHKWAGACFPDD
Sbjct:   26 VKYQPNGERSEVTQYMYLRFRRGGNVHGVGYEESRKLCKITGKYKLNARTNQTALALQCKFSNECDTVLFHGWGNGTGLVGNCYIREIDPFSAFSGIPGIRQLSRDKYKGSFLMLKQSGMGGAKLRSMVHTRRVHKWAGACFPDD 170
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BLAST of mRNA_E-siliculosus-1a_F_contig10670.481.1 vs. uniprot
Match: A0A6H5KY23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY23_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.890e-36
Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 0 
Query:   10 VKYQPNGERSEVTQYMYLRFRRGGNVHGVGYEESRKLCKITGKYKLNTRMNQTALALQCKFSNECDTVLFHGWGNGTGLVGNCYVREIDPFSALSGI 106
            V YQP+G R E+ Q+MYLRFR G  V+GVG+EE RK CKI+GKYK N   NQ A+ + C+FSN+ DTV+FHG GNGTGLVGNCY+RE+D FS+ S I
Sbjct:   99 VTYQPSGGRHEIVQHMYLRFREGA-VYGVGFEEGRKACKISGKYKRNEGANQMAVVMTCRFSNDVDTVMFHGSGNGTGLVGNCYIRELDRFSSFSQI 194
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10670.481.1 vs. uniprot
Match: D8LAZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAZ0_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.480e-13
Identity = 37/62 (59.68%), Postives = 45/62 (72.58%), Query Frame = 0 
Query:   10 VKYQPNGERSEVTQYMYLRFRRGGNVHGVGYEESRKLCKITGKYKLNTRMNQTALALQCKFS 71
            V YQP+G R EV Q+MYLRFR G  V+GVG+EE RK CKI+GKYK N   NQ A+ + C+ S
Sbjct:   42 VTYQPSGGRYEVVQHMYLRFREGA-VYGVGFEEGRKACKISGKYKRNEGANQVAVVMTCRSS 102
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10670.481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN65_ECTSI9.120e-10096.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY23_9PHAE1.890e-3663.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAZ0_ECTSI1.480e-1359.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10670contigE-siliculosus-1a_F_contig10670:139..1976 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10670.481.1mRNA_E-siliculosus-1a_F_contig10670.481.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10670 139..1976 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10670.481.1 ID=prot_E-siliculosus-1a_F_contig10670.481.1|Name=mRNA_E-siliculosus-1a_F_contig10670.481.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=154bp
PRSRSETQTVKYQPNGERSEVTQYMYLRFRRGGNVHGVGYEESRKLCKIT
GKYKLNTRMNQTALALQCKFSNECDTVLFHGWGNGTGLVGNCYVREIDPF
SALSGIPGIRQLSRDKYKGSFLMLKQAGMGGAKLRSMVHTRRVHKWAGAC
FPDD
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