mRNA_E-siliculosus-1a_F_contig1067.476.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI) HSP 1 Score: 1112 bits (2876), Expect = 0.000e+0 Identity = 610/678 (89.97%), Postives = 624/678 (92.04%), Query Frame = 1 Query: 28 AVHSLSVLCKRRPACLSTVLDCFQASIVETTKIMVDDDPESSXXXXXXXXXXXXXXXXXXXXXXR-RKLTVCILLYTIGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGACALGFSAGDIIGGSLTEHHRGAACLVSAAFATASLLSLALFGWRETAPPLVGEGWQRWLWWRME---KVDDAVVGIINYDDDVGANGENGGRDVAAVLQGGDAAAAATASVDSFVRDDDGRQXXXXXXRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLISLAVAWWPLRKLDKTKNNVLPDHDASPRGWEPPTPAPTRAPAAGDEVQHAAEGGVLATAGGAADDNNVSTANAGGLVKAAEGNPQNCADLVSDLSVLADGRAPLLASNSDDRVVD-----DDLPEREEQDEEQGMGGAGVGEGMRQPLLAVPA 2034
+ SLSVLCK RPACLSTVLDCFQASIVETTKIMVDDDPESS XXXXXXXXXX RKLT CILLYTIGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGA ALGFSAGDIIGGSLTEHHRGAACLVSAAF+ ASLLSLALFGWRETAPPLVGEGWQRWLWWR+E ++DDAVVG+ N DDDVGAN GRDVAAV+QGGDA A TASVDSFV DDDG+Q RARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSV+VSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISL+SLAVAWWPLRKLDKTKN VLPDHDASPRGWEPPTPAPTRAPAAGDEVQHAAEGGVLAT GGAADDNNVSTANAGGLVKAAE NPQNCAD+VSDLS+LA RAPLLA NSDDRVVD D+LPEREEQDEEQG+ GAGV EGM Q LLAVPA
Sbjct: 8 SARSLSVLCKCRPACLSTVLDCFQASIVETTKIMVDDDPESSETALLSEGDRGRXXXXXXXXXXXXRKLTACILLYTIGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGASALGFSAGDIIGGSLTEHHRGAACLVSAAFSAASLLSLALFGWRETAPPLVGEGWQRWLWWRVEEQERIDDAVVGM-NDDDDVGANRGICGRDVAAVVQGGDAVEA-TASVDSFVWDDDGKQGAGGRGRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVMVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLVSLAVAWWPLRKLDKTKNIVLPDHDASPRGWEPPTPAPTRAPAAGDEVQHAAEGGVLAT-GGAADDNNVSTANAGGLVKAAEDNPQNCADVVSDLSLLARSRAPLLAINSDDRVVDVSPGDDELPEREEQDEEQGIDGAGVDEGMGQLLLAVPA 682
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: A0A6H5L7V6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V6_9PHAE) HSP 1 Score: 477 bits (1227), Expect = 1.070e-157 Identity = 263/325 (80.92%), Postives = 272/325 (83.69%), Query Frame = 1 Query: 127 MVDDDPESSXXXXXXXXXXXXXXXXXXXXXX-RRKLTVCILLYTIGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGACALGFSAGDIIGGSLTEHHRGAACLVSAAFATASLLSLALFGWRETAPPLVGEGWQRWLWWRME---KVDDAVVGIINYDDDVGANGENGGRDVAAVLQGGDAAAAATASVDSFVRDDDGRQXXXXXXRARRSGRKQLNPLSVLKVFLESRALLR 1089
MVD DPESS RKLT CILLYTIGASMMTQVYPKIILLS GGDDGEASKYRGWLAAGVSVIQL+FVPAISG SDVVGRK VVCFAQVLHA SVLALAAMADSL WATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGACALGFSAGDIIGGSL EHHRGAACLVSAAFATASLLSL LFGWRETAPPLVGEGWQRWLWWRME +VDDAVVGI +DDVGANG NGGRD+ AV+QGGDA A+TASVDSFV DDD R+ RARRSGR+QLNPLSVLKVFLE+R LR
Sbjct: 1 MVDVDPESSETALLPGGFQGRPNRDDDAAAAVHRKLTACILLYTIGASMMTQVYPKIILLSSGGDDGEASKYRGWLAAGVSVIQLLFVPAISGSSDVVGRKVVVCFAQVLHASSVLALAAMADSLVWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGACALGFSAGDIIGGSLAEHHRGAACLVSAAFATASLLSLMLFGWRETAPPLVGEGWQRWLWWRMEEQERVDDAVVGIN--EDDVGANGGNGGRDIVAVVQGGDAVGASTASVDSFVWDDDRRKGAGCRGRARRSGREQLNPLSVLKVFLETRRTLR 323
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: D7FNH6_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH6_ECTSI) HSP 1 Score: 317 bits (812), Expect = 3.340e-93 Identity = 192/484 (39.67%), Postives = 269/484 (55.58%), Query Frame = 1 Query: 220 RRKLTVCILLYTIGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLS----PDRGKGATHGLGIAFGACALGFSAGDIIGGSLTEHHRGAACLVSAAFATASLLSLALFGWRETAPPLVGEGWQRWLWWRMEKVDDAVVGIINYDDDVGANGENGGRDVAAVLQGGDAAAAATASVDSFVRDDDGRQXXXXXXRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEA--------PFFLATAISLISLAVAWWPLRKLDKT 1635
RR+L+VC+ L+ +G ++++QVYPK++L D+GEAS++ GWL ++QLI +P + G SDV+GR+A++ A L A S +L S+A +VC++ + V ILP+SQA++IDLS G THGLG+ A L S G ++GGSLTE H G AC +SA+ + +LSL FGW ETAP A QG A A ++ + + AR S + +NP SVLKVFLES L+++A F LSLNVF+ YNY D+R+ W+P +IS FF+T+ IL+AL G +IRF+VPKRL+ +G L G+++Q S + GL +GWM Y LV LQ ITEPC+Q +MA VG + QGSLQGAV LR V +G+A ++ Q+FS G S E A P F A+ +L +AW+ LRK +T
Sbjct: 50 RRRLSVCLFLHIVGVAIISQVYPKVVLEHFDHDNGEASRFTGWLTLVSCIVQLIAIPTLCGASDVIGRRAILAGALALTAVSSFSLGLAPSSIAVVSVCQVVSGVANAILPISQAVVIDLSHWGAAAGGGEVTHGLGLIGAAFGLAVSVGPVLGGSLTEDHAGTACWLSASMSVLGVLSLKFFGWEETAP--------------------------------------------AATQGAGGATANASAGGGWKK-----------LCARGSSSRIVNPFSVLKVFLESSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLFFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQSSSTTLFGLASQGWMCYVVLVATVLQYITEPCIQGVMANHVGADRQGSLQGAVQCLRNVSQGLAGVLYGQIFSLGVSTRVENALGFVLPGLPLFCASGCGATALTIAWYALRKAGET 478
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: A0A835YXD6_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD6_9STRA) HSP 1 Score: 157 bits (397), Expect = 6.010e-36 Identity = 125/480 (26.04%), Postives = 208/480 (43.33%), Query Frame = 1 Query: 265 SMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGACALGFSAGDIIGGSLTEHHRGAACLVSAA-----------FATASLLSL---ALFGWRETAPPLVGEGWQ----------RWLWWRMEKVDDAVVGIINYDDDVGANGENGGRDVAAVLQGGDAAAAATASVDSFVRDDDGRQXXXXXXRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFSAGASVGFEEA---------PFFLATAISLISLAVA 1605
++ QVYPK++L GGDDG+ + + GW++ G S++Q + P+++ DV GR+ ++ A A +++ A + T +C V++PVSQAI+ D++ G A HG G+ G LG G ++GG LT HR AAC +A +A +LL+L ++GW ET P + + R+ W + V A++G + + + R + + Q A + + + + AC YF ++ F + Y +DYRFGW P +I F A + + + VIR +VP+ +T+ + G+++Q + + G+ +GW LY AL + A GSLQGA+ SLR++ +G+A P++ +F+ G S +A F A SL LA A
Sbjct: 202 AIQAQVYPKVVLSYYGGDDGKTASFLGWVSGGSSMLQFVLSPSLTASCDVRGRRGLLLAAAGAQALICFIWGFSPNNIGLAAAVAVITGMCGVVIPVSQAIISDVTRHDGAAAAHGFGVIAGTFGLGLCIGPLLGGWLTNVHRPAACFTAAGAALLAHCWWRWWAGTALLALLVATVWGWEETYVPDAADASRAALRRSMSSTRYHWQVVNPV--AIIGTVLH--------KRRTRRLPSAAQAARAQTVVSGPLSAA------------------GCTRXXXXXXXXXXXXXXXXXXXXACVYFCACTAIGSFNSWYTLLDYRFGWGPVQIGAFCAAFGLGITAVQSLVIRAVVPRLMTQARAVPVGMAIQALGMGLFGIANKGWELYAITPISALSS----------AAATDASRLGSLQGALFSLRILSQGLAGPLYGALFNLGISDALRDALGGTRLPGLAFLAAALASLAGLAFA 643
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: A0A2S6NDD1_9HYPH (Tetracycline resistance MFS efflux pump n=1 Tax=Rhodoblastus sphagnicola TaxID=333368 RepID=A0A2S6NDD1_9HYPH) HSP 1 Score: 100 bits (248), Expect = 1.520e-18 Identity = 111/425 (26.12%), Postives = 168/425 (39.53%), Query Frame = 1 Query: 256 IGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGL-GIAFGACALGFSAGDIIGGSLTEHHRGAACLVSAAFATASLLSLALFGWRETAPPLVGEGWQRWLWWRMEKVDDAVVGIINYDDDVGANGENGGRDVAAVLQGGDAAAAATASVDSFVRDDDGRQXXXXXXRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFS 1527
I ++ V PK+I+ GGD AS++ G+ +++Q + P + SD GR+ VV + + L +A +A SL W + RLA+ +QA + D++P + A GL G FG +GF G IGG L E +AAF SLL+ A++G+ L E R WR V+G + + GR+ L +FL A + C LFV+ Y D+R+ WTP+E A I + G ++R V K+ E A+ G+ V + + GW A+ AL + P +Q++ FV QG+LQGAV SLR V + FTQ+ +
Sbjct: 23 IALGVIVPVLPKLIVSFRGGDFSAASRWVGYFGIAWAMMQFMCQPVLGALSDRFGRRPVVLLSNIGLGVDYLVMA-LAPSLTWLFIGRLASGAAAASFSTAQAYIADITPPEKRAAKFGLLGAVFG---VGFVIGPAIGGWLGEIDLRLPFWGAAAF---SLLN-AIYGYFVLPESLAPENRTRKFVWRSAN----VIGALKF-----------------------------------------------------LGREPGLALVTTAIFLSLLAHESLPC---LFVI----------YTDFRYHWTPTETGLALAAVGITQTIVAGGLVRQSV-KKFGETPSAVAGLLFGVAGFVGFAVAPAGWAFIAAIPLIALWGLAAPAMQSMATRFVNVSEQGTLQGAVSSLRGVSGMIGPITFTQLLA 368
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: A0A212PX24_RHOAC (MFS transporter, DHA1 family, tetracycline resistance protein n=2 Tax=Rhodoblastus acidophilus TaxID=1074 RepID=A0A212PX24_RHOAC) HSP 1 Score: 96.3 bits (238), Expect = 2.750e-17 Identity = 108/425 (25.41%), Postives = 167/425 (39.29%), Query Frame = 1 Query: 256 IGASMMTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADSLAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGL-GIAFGACALGFSAGDIIGGSLTEHHRGAACLVSAAFATASLLSLALFGWRETAPPLVGEGWQRWLWWRMEKVDDAVVGIINYDDDVGANGENGGRDVAAVLQGGDAAAAATASVDSFVRDDDGRQXXXXXXRARRSGRKQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLRVVGEGVAAPVFTQVFS 1527
+ ++ V PK+I+ GD AS++ G+ +++Q +F P + SD GR+ VV + V L +A +A SL W + RLA+ +QA + D++P + A GL G FG +GF G IGG L E +AAF+ A+ A++G+ L E WR V+G + + R+ L V +FL A + C LFV+ Y D+R+ WTP+E A + + G ++R V KR E A+ G+ V + + GW ++ AL + P +Q++ FVG QG+LQGAV SLR V + FTQ+ +
Sbjct: 23 VALGIIVPVLPKLIVSFRDGDFSAASRWVGYFGIAWAMMQFMFQPVLGALSDRFGRRPVVLLSNVGLGVDYLVMA-LAPSLTWLFIGRLASGAAAASFSTAQAYIADITPPEKRAAKFGLLGAVFG---VGFVLGPAIGGWLGEIDLRLPFWGAAAFSFAN----AVYGFFVLPESLAPENRTPKFVWRSAN----VLGSLKF-----------------------------------------------------ISREPGLALIVSAIFLSLLAHESLPC---LFVI----------YTDFRYHWTPTETGLALAAVGVTQTIVAGGLVRQTV-KRFGETPSAVAGLLFGVAGFVGFAVAPVGWAFIASIPLIALWGLAAPAMQSMATRFVGVSEQGTLQGAVSSLRGVSGMIGPITFTQLLA 368
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: A0A520H1E7_9SPHI (MFS transporter (Fragment) n=1 Tax=Pedobacter sp. TaxID=1411316 RepID=A0A520H1E7_9SPHI) HSP 1 Score: 91.3 bits (225), Expect = 6.800e-16 Identity = 60/203 (29.56%), Postives = 96/203 (47.29%), Query Frame = 1 Query: 1030 KQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVD-YRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSLR----VVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLISLAVAWWPLRK 1623
K+ NP+ LK+ + A+ +A S+FL L+ T +NY YRF WT + A +L+ + + +V K L +E+ G+ + +++ + WM++ LV L + P LQA +A++V P QG LQGA+ SL + G + +F +A A V F F L L+ +AW LRK
Sbjct: 146 KRANPIGSLKMLRSTPAIAGLAVSFFLIYLAAQAVQTNWNYFTMYRFHWTEKMVGISLAVVGLLVGGVQAGLTKVVVQK-LGKERSIYLGLGLYTLGLVLFAFATQSWMMFVFLVPYCLGGVAGPSLQATLASYVPPNQQGELQGALTSLMSLTTIFGPLIMNYLFEYFTTASAPVHFPGVSFLLGAIFMLVGAIIAWTVLRK 347
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: UPI000E6B09B3 (TCR/Tet family MFS transporter n=1 Tax=Lysobacter tabacisoli TaxID=2315424 RepID=UPI000E6B09B3) HSP 1 Score: 91.7 bits (226), Expect = 1.100e-15 Identity = 63/206 (30.58%), Postives = 98/206 (47.57%), Query Frame = 1 Query: 1015 RRSGR---KQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYN-YVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSL----RVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLISLAVAW 1608
RRS R NP+ L + + +A FL L+ V+ + + + DYR+GW P E+SY A + + ++ +V K L E + LFG+ V + L RGWM Y L AL + P QA++ VG ++QG +QGA+MSL + G + A F A + APFF+A+A+ ++ + W
Sbjct: 207 RRSARFDWSHANPVGSLLLLKRYPQVFGLAAVVFLANLAHYVYPSVFVLFADYRYGWGPGEVSYVLALVGVFSVIVNALLVGRVV-KALGERRTLLFGLGCGVVGFFIYALADRGWMFYVGLPISALWALAAPATQALITRQVGADVQGRIQGALMSLVSLAGIAGPALFAGSFGWFIRDAAPLKLPGAPFFIASAVLASAVLIGW 411
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: A0A0A0EV76_9GAMM (MFS transporter n=2 Tax=Lysobacter TaxID=68 RepID=A0A0A0EV76_9GAMM) HSP 1 Score: 89.4 bits (220), Expect = 5.900e-15 Identity = 49/157 (31.21%), Postives = 81/157 (51.59%), Query Frame = 1 Query: 1150 YVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSL----RVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLISLAVAW 1608
+ DYRFGW P ++++ A + + G ++ +V K + E + L G+S V ++ GL GWM + + AL + P QA++ VG ++QG +QGA+MSL ++G + A F A V AP+FLA + ++A+AW
Sbjct: 247 FADYRFGWGPRDVAWVLAVVGVCSVIVNGALVGRVV-KAIGERRALLLGLSCGVTGFVLYGLASEGWMFWLGIPVSALWALAAPSTQALITRQVGAQVQGRIQGALMSLVSLAGIIGPSLFAGSFGYFIGKSAPVHLPSAPWFLAAGLLACAVAIAW 402
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Match: A0A508A2J3_9GAMM (TCR/Tet family MFS transporter n=3 Tax=Lysobacter TaxID=68 RepID=A0A508A2J3_9GAMM) HSP 1 Score: 89.0 bits (219), Expect = 8.410e-15 Identity = 58/178 (32.58%), Postives = 85/178 (47.75%), Query Frame = 1 Query: 1150 YVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQVFSVLVSGLCFRGWMLYPALVFGALQNITEPCLQAIMATFVGPELQGSLQGAVMSL----RVVGEGVAAPVFTQVFSAGASVGFEEAPFFLATAISLISLAVAWWPLRKLDKTKNNVLPDHDASP 1671
+ DYRFGW P E+ + A + L ++ +V L E + L G+ V LV GL RG + + AL + P QA++ VGPE+QG +QGA+MSL +VG G+ A F A V AP+ +A AI +++ +AW +L V D A+P
Sbjct: 247 FADYRFGWGPREVGWVLAAVGVCSILVNALLVGRVVGW-LGERRTLLLGLGAGVVGFLVYGLADRGGLWLLGIPISALWALASPATQALVTREVGPEVQGRIQGALMSLIAMAGIVGPGLFAGSFGYFIDAARPVAHPGAPWLIAAAILAVAVVIAWAKAPRLAPRGYPVEADGPATP 423 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1067.476.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1067.476.1 >prot_E-siliculosus-1a_F_contig1067.476.1 ID=prot_E-siliculosus-1a_F_contig1067.476.1|Name=mRNA_E-siliculosus-1a_F_contig1067.476.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=637bp MVDDDPESSETALLPGGDRGRQQRDDAAAAVRRKLTVCILLYTIGASMMTback to top mRNA from alignment at E-siliculosus-1a_F_contig1067:5371..13370+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1067.476.1 ID=mRNA_E-siliculosus-1a_F_contig1067.476.1|Name=mRNA_E-siliculosus-1a_F_contig1067.476.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8000bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1067:5371..13370+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1067:5371..13370+ >mRNA_E-siliculosus-1a_F_contig1067.476.1 ID=mRNA_E-siliculosus-1a_F_contig1067.476.1|Name=mRNA_E-siliculosus-1a_F_contig1067.476.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3822bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1067:5371..13370+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |