prot_E-siliculosus-1a_F_contig1066.469.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1066.469.1
Unique Nameprot_E-siliculosus-1a_F_contig1066.469.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length225
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1066.469.1 vs. uniprot
Match: D7G0D1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D1_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 4.750e-134
Identity = 205/224 (91.52%), Postives = 209/224 (93.30%), Query Frame = 0
Query:    1 MCSGREWPTPEARPRRGDAKRRLQEVQDRQVASVCMGIEHLMNKRRRSAKGRGGAARVSPPVGQQARLFRDKSNDGAGDSCGGDHQXXXXXDHPSSCRLCESTLRVLSTALLHVRRCRHQQKQKQQHLDNGECNNNNKNKDVPPAFGCDACWMWSMVGERCASLGISLPNSLLFAASGNIEGGAGVGGGRVDGSRLPGGATTAATASEPDGPGLPVVGRVLYHE 224
            MCSGREWPTPEARPRRGDAKRRLQEVQD QVASVCMGIEHLMNKRRRS K RGGAARV PPVGQQARLFRDKS+D AGDSCGGDHQXXXXXDHPSSCRLCESTLRVLSTALLHVRRCRHQQKQKQQHLDNGE  NNN NKDVP A GCDAC MWSMVGERCASLGISL N+LLFAA+G+IEGGAGVGGGRVDGSRL GGATTAATASEPDGP L VVGRVLYHE
Sbjct:    1 MCSGREWPTPEARPRRGDAKRRLQEVQDLQVASVCMGIEHLMNKRRRSTKRRGGAARVFPPVGQQARLFRDKSSDDAGDSCGGDHQXXXXXDHPSSCRLCESTLRVLSTALLHVRRCRHQQKQKQQHLDNGESINNN-NKDVPTASGCDACRMWSMVGERCASLGISLSNNLLFAANGSIEGGAGVGGGRVDGSRLAGGATTAATASEPDGPALRVVGRVLYHE 223          
BLAST of mRNA_E-siliculosus-1a_F_contig1066.469.1 vs. uniprot
Match: A0A6H5KZ70_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ70_9PHAE)

HSP 1 Score: 331 bits (849), Expect = 5.150e-113
Identity = 175/224 (78.12%), Postives = 181/224 (80.80%), Query Frame = 0
Query:    1 MCSGREWPTPEARPRRGDAKRRLQEVQDRQVASVCMGIEHLMNKRRRSAKGRGGAARVSPPVGQQARLFRDKSNDGAGDSCGGDHQXXXXXDHPSSCRLCESTLRVLSTALLHVRRCRHQQKQKQQHLDNGECNNNNKNKDVPPAFGCDACWMWSMVGERCASLGISLPNSLLFAASGNIEGGAGVGGGRVDGSRLPGGATTAATASEPDGPGLPVVGRVLYHE 224
            MCSGREWPTPEARPRR DAKRRLQEVQD QVASVCMGIEHLMNKRRRS KGRGGAARVSPPVGQQ RLFRDKSN  AGDSC GDHQ     DHPSSCRLCESTLRVLSTALLHVRRC HQQ              N      PPA GCDAC MWS VGERC+SLGISLPN++LFAASGNIEG AG GGGRV+ +RL GGATTAATASEPDGP L VVGRV Y+E
Sbjct:    1 MCSGREWPTPEARPRRSDAKRRLQEVQDLQVASVCMGIEHLMNKRRRSTKGRGGAARVSPPVGQQTRLFRDKSNGDAGDSCSGDHQCGGDHDHPSSCRLCESTLRVLSTALLHVRRCLHQQXXXXXXXXXXXXXXNKDVPQAPPASGCDACRMWSTVGERCSSLGISLPNNILFAASGNIEGEAGDGGGRVECNRLAGGATTAATASEPDGPELRVVGRVFYNE 224          
BLAST of mRNA_E-siliculosus-1a_F_contig1066.469.1 vs. uniprot
Match: A0A6H5KLU7_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU7_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 9.380e-59
Identity = 130/234 (55.56%), Postives = 151/234 (64.53%), Query Frame = 0
Query:    1 MCSGREWPTPEARPRRGDAKRRLQEVQDRQVASVCMGIEHLMNKRRRSAKGRGGAARVSPPVGQQ-ARLFRDKSNDGAGDSCGGDHQXXXXXDHPSSCRLCESTLRVLSTALLHVRRCRHQQKQKQQHLDNGECNNNNKNKDVPPAF-----GCDACWMWSMVGERCASLGISLPN----SLLFAASGNIEGGAGVGGGRVDGSRLPGGATTAATASEPDGPGLPVVGRVLYHE 224
            MCSG EW  PEAR RR DAKRRLQE+Q+ QVASVC+GIEHLMNKRR+ AKG     R +PP GQQ ARL R+  +  A DSC  D +     DH   CRLCESTLRVLSTALLHV+RCRH +K+   HLD+ + + NN     PPA      GCDAC MWS VG+ CASLGI   N    S+LF+  G +EGG  VGGGRV GS     ATT +T    D     + GRVL +E
Sbjct:    1 MCSG-EWLIPEARVRRNDAKRRLQEIQELQVASVCLGIEHLMNKRRKCAKGAATRVRPAPPAGQQQARLSRESGD--ARDSCSSDGR-----DHQHPCRLCESTLRVLSTALLHVKRCRHNRKK---HLDDDKKSGNNAR--APPAVSSSGDGCDACRMWSAVGDCCASLGIPFSNGSSSSVLFSTGGGVEGG--VGGGRVVGSSRR--ATTLSTGGV-DPLDESLGGRVLVNE 216          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1066.469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0D1_ECTSI4.750e-13491.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ70_9PHAE5.150e-11378.13C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KLU7_9PHAE9.380e-5955.56C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1066contigE-siliculosus-1a_F_contig1066:2559..4582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1066.469.1mRNA_E-siliculosus-1a_F_contig1066.469.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1066 2120..4673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1066.469.1 ID=prot_E-siliculosus-1a_F_contig1066.469.1|Name=mRNA_E-siliculosus-1a_F_contig1066.469.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=225bp
MCSGREWPTPEARPRRGDAKRRLQEVQDRQVASVCMGIEHLMNKRRRSAK
GRGGAARVSPPVGQQARLFRDKSNDGAGDSCGGDHQCGGDHDHPSSCRLC
ESTLRVLSTALLHVRRCRHQQKQKQQHLDNGECNNNNKNKDVPPAFGCDA
CWMWSMVGERCASLGISLPNSLLFAASGNIEGGAGVGGGRVDGSRLPGGA
TTAATASEPDGPGLPVVGRVLYHE*
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