prot_E-siliculosus-1a_F_contig1066.472.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1066.472.1
Unique Nameprot_E-siliculosus-1a_F_contig1066.472.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length214
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1066.472.1 vs. uniprot
Match: A0A6H5KHE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE0_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 1.140e-134
Identity = 199/215 (92.56%), Postives = 203/215 (94.42%), Query Frame = 0 
Query:    1 MGCVPSS-FPEEPPARTVAGSAPLDGRTFADIMIRFMTENREGPSLEQGALLEYIRNQGTSADEGDGMCNKTPIQFASQHRLIVWLMFIIRRLNVSRPDFLGDALRDMNAVDPRPRATLKGDDLLKYDAVVKLLTVPATAVFLEGHYRGQTKETEEALTAAFKTLKHTVPEAREIPNEPPALAAWMMASTTAKLAIEAYNGGLWGLFTSCLKLAE 214
            MGCV SS   EEPPARTV GSAPLDGRTFADI+IRFMTENREGPSLEQG LLEYIRNQGTSADEGDGMCNKTPIQFASQHRLIVWLMFIIRRLNV RP+FLGDALRDMNAVDPR R TLKGDDL+KYDAVVKLLTVPATAVFLEGHYRGQTKETEEALTAAFK LK+T PEAREIPNEPPALAAWMMASTTAKLAIEAY GGLWGLFTSCLKLAE
Sbjct:    1 MGCVSSSSISEEPPARTVTGSAPLDGRTFADIIIRFMTENREGPSLEQGELLEYIRNQGTSADEGDGMCNKTPIQFASQHRLIVWLMFIIRRLNVFRPEFLGDALRDMNAVDPRLRRTLKGDDLVKYDAVVKLLTVPATAVFLEGHYRGQTKETEEALTAAFKALKYTAPEAREIPNEPPALAAWMMASTTAKLAIEAYTGGLWGLFTSCLKLAE 215
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1066.472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHE0_9PHAE1.140e-13492.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1066contigE-siliculosus-1a_F_contig1066:26064..31882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1066.472.1mRNA_E-siliculosus-1a_F_contig1066.472.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1066 26052..31882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1066.472.1 ID=prot_E-siliculosus-1a_F_contig1066.472.1|Name=mRNA_E-siliculosus-1a_F_contig1066.472.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=214bp
MGCVPSSFPEEPPARTVAGSAPLDGRTFADIMIRFMTENREGPSLEQGAL
LEYIRNQGTSADEGDGMCNKTPIQFASQHRLIVWLMFIIRRLNVSRPDFL
GDALRDMNAVDPRPRATLKGDDLLKYDAVVKLLTVPATAVFLEGHYRGQT
KETEEALTAAFKTLKHTVPEAREIPNEPPALAAWMMASTTAKLAIEAYNG
GLWGLFTSCLKLAE
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