prot_E-siliculosus-1a_F_contig10659.468.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10659.468.1
Unique Nameprot_E-siliculosus-1a_F_contig10659.468.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length131
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: D7FXB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB5_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 9.070e-34
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 0
Query:    7 SIADSL--VMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAADLKGNLDTECFVFTVRHDKHKLKRANHIRDTDLHINNCTRARFTDDSLSTIFHPSF 106
            SIADSL  +MYG  D++HPLPETV  +Q++V EYV +VT +AC AA++KG LDTECFV  VR+DK K KR   + D ++HI NCTR R+ DD+L T++HP+F
Sbjct:   23 SIADSLPMMMYGFGDEQHPLPETVAYMQEVVGEYVQYVTDKACKAAEVKGKLDTECFVLAVRNDKAKFKRVKELLDMNVHIKNCTRQRYVDDNL-TVYHPTF 123          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: Q8QN93_ESV1K (EsV-1-196 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN93_ESV1K)

HSP 1 Score: 75.1 bits (183), Expect = 2.190e-15
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
Query:   13 VMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAA 50
            +MYGA DDEHPLPETVDC+QQLVAEYVSHVTSEACL +
Sbjct:   32 MMYGAGDDEHPLPETVDCMQQLVAEYVSHVTSEACLVS 69          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: D8LPL2_ECTSI (EsV-1-193/196 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL2_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 1.180e-14
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0
Query:   13 VMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAA 50
            +MYGA DDEHPLPETV C+QQLVAEYVSHVTSEACL +
Sbjct:    1 MMYGAGDDEHPLPETVGCMQQLVAEYVSHVTSEACLVS 38          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: Q8QN96_ESV1K (EsV-1-193 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN96_ESV1K)

HSP 1 Score: 72.0 bits (175), Expect = 2.040e-14
Identity = 32/38 (84.21%), Postives = 35/38 (92.11%), Query Frame = 0
Query:   13 VMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAA 50
            +MYGA DDEHPLPETV C+QQLVAEYVSHVTSEACL +
Sbjct:    9 MMYGAGDDEHPLPETVACMQQLVAEYVSHVTSEACLVS 46          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: F0WG55_9STRA (Uncharacterized protein AlNc14C88G5585 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG55_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.230e-8
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    7 SIADSLVMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAADLKGNLDTECFVFTVRHDKHKLKRA 75
            S+ D ++ +G  DD  P+ E+V  +++ V EY+  +T +A   + +KG LDTECF+FT+R D+ K  R 
Sbjct:   58 SVRDMMIGFG--DDMEPMEESVAVMKEFVVEYIHCMTKKAVDVSAVKGKLDTECFIFTIRKDQEKYGRV 124          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: A0A5D6XFL5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFL5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.640e-7
Identity = 25/62 (40.32%), Postives = 38/62 (61.29%), Query Frame = 0
Query:   13 VMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAADLKGNLDTECFVFTVRHDKHKLKR 74
            +M+G  D+  PL ET   ++ +  EYV  +T +A   A +KG LDTECF+F +R D  + +R
Sbjct:  123 MMFGFGDEVEPLDETAALMEDMTVEYVHAMTKKALDLAQVKGKLDTECFIFLIRKDPERYER 184          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: M4B2B9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2B9_HYAAE)

HSP 1 Score: 56.2 bits (134), Expect = 3.640e-7
Identity = 38/108 (35.19%), Postives = 57/108 (52.78%), Query Frame = 0
Query:    8 IADSL--VMYGAADDEHPLPETVDCLQQLVAEYV------SHVTSEACLAADLKGNLDTECFVFTVRHDKHKLKRANHIRDTDLHINNCTRARFTDDSLSTIFHPSFE 107
            + DS+  +++G  D+  PL ET   +++LV EYV      S  T +A   A +KG LDTECF+F +R D  +  R   +    L  N+  RA     +L++ F PS E
Sbjct:   70 LVDSIKHMLFGFGDENEPLDETAQLMEELVVEYVHAMVFESAYTKKAMDLAAVKGKLDTECFIFLIRKDPERYNRVAEL----LRANDEFRA-----ALNSGFDPSDE 168          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: A0A6A6XXP3_9PLEO (TFIID-18kDa-domain-containing protein n=1 Tax=Melanomma pulvis-pyrius CBS 109.77 TaxID=1314802 RepID=A0A6A6XXP3_9PLEO)

HSP 1 Score: 55.1 bits (131), Expect = 1.110e-6
Identity = 30/87 (34.48%), Postives = 47/87 (54.02%), Query Frame = 0
Query:   12 LVMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAAD--LKGNLDTECFVFTVRHDKHKLKRANHIRDTDLHINNCTRARFTDD 96
            L+ +G  DD+HPLPETV CL ++V +Y+     EA   A    +  +  + F F +R D  KL R + + +TD  +    +A  TD+
Sbjct:   24 LIAFG--DDDHPLPETVKCLDEIVTDYIIETCHEAASVAHHARRAKIKLDDFKFMLRRDTTKLGRVSEMLETDKELKRKRKAFDTDE 108          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: A0A397E7E0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397E7E0_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.490e-6
Identity = 22/70 (31.43%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   13 VMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAADLKGNLDTECFVFTVRHDKHKLKRANHIRDTD 82
            +M+G  D   P  +TV+ ++++  EY+  +T +A   + ++G LD +C +F+VR D+  L RAN + + +
Sbjct:   16 MMHGFGDVWEPDTDTVELMEEIAVEYIRSMTKKAMEISAIRGKLDVDCLLFSVRKDEETLDRANQLLEAN 85          
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Match: W4FSD5_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=W4FSD5_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.650e-6
Identity = 22/70 (31.43%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   13 VMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAADLKGNLDTECFVFTVRHDKHKLKRANHIRDTD 82
            +M+G  D   P  +TV+ ++++  EY+  +T +A   + ++G LD +C +F+VR D+  L RAN + + +
Sbjct:   91 MMHGFGDVWEPDTDTVELMEEIAVEYIRSMTKKAMEISAIRGKLDVDCLLFSVRKDEETLDRANQLLEAN 160          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10659.468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FXB5_ECTSI9.070e-3457.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
Q8QN93_ESV1K2.190e-1586.84EsV-1-196 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPL2_ECTSI1.180e-1484.21EsV-1-193/196 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Q8QN96_ESV1K2.040e-1484.21EsV-1-193 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
F0WG55_9STRA1.230e-839.13Uncharacterized protein AlNc14C88G5585 n=1 Tax=Alb... [more]
A0A5D6XFL5_9STRA1.640e-740.32Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
M4B2B9_HYAAE3.640e-735.19Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6A6XXP3_9PLEO1.110e-634.48TFIID-18kDa-domain-containing protein n=1 Tax=Mela... [more]
A0A397E7E0_9STRA1.490e-631.43Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
W4FSD5_9STRA5.650e-631.43Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 11..48
e-value: 1.6E-8
score: 35.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 12..47
IPR003195Transcription initiation factor IID, subunit 13PFAMPF02269TFIID-18kDacoord: 13..77
e-value: 7.3E-13
score: 48.4
IPR003195Transcription initiation factor IID, subunit 13PANTHERPTHR11380TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATEDcoord: 12..77
NoneNo IPR availablePANTHERPTHR11380:SF5TRANSCRIPTION INITIATION PROTEIN SPT3 HOMOLOGcoord: 12..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10659contigE-siliculosus-1a_F_contig10659:1546..2157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10659.468.1mRNA_E-siliculosus-1a_F_contig10659.468.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10659 1546..2157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10659.468.1 ID=prot_E-siliculosus-1a_F_contig10659.468.1|Name=mRNA_E-siliculosus-1a_F_contig10659.468.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=131bp
MEGGSDSIADSLVMYGAADDEHPLPETVDCLQQLVAEYVSHVTSEACLAA
DLKGNLDTECFVFTVRHDKHKLKRANHIRDTDLHINNCTRARFTDDSLST
IFHPSFEAVAPPQQTIPASDGVAGGGKETL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003195TFIID_TAF13
IPR009072Histone-fold