mRNA_E-siliculosus-1a_F_contig1065.460.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1065.460.1
Unique NamemRNA_E-siliculosus-1a_F_contig1065.460.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: A0A6H5KZM9_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM9_9PHAE)

HSP 1 Score: 961 bits (2484), Expect = 0.000e+0
Identity = 503/563 (89.34%), Postives = 517/563 (91.83%), Query Frame = 1
Query:    7 EGARAVTEVGVRRARRWARIRRRGYGTGGASPGTARSDGAQARSSRSVGDSGGGGNTGPRAQLLISNPGEXXXXXXXXXXXXXXXXXXXXXXGATAVVMGLLAVASAQEETTYPAAAVGVMVPLTPAGLQYTADVTVASGNYSSTAALIVDTTASMVAFPVCSNVTGVEEGDSADEEGGGGDGNACIPFEDTLDEAGEKPCRAGTLDGGTVSLHPEDPPGSQFLPYLQDQAREVSLSTNVSASGSVFATFNTTVADNSGTLDGWDGAAGVLGLARFPHTTCMSDGTEVNGSLRSVFSQMDGADSVFALDLGDEGYNSTLEIGGYSGSLSDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPVEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDDGDQPSNSSSINDGDDRRLCVTREAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSSYYLTA 1695
            +GA+A TEVGV RARRWARIR+RGYGTGG SPG ARS+G Q R S SVGD   G  TGPRA LLISNP E    XXXXX             GA AVV+GLLAV SAQEETTYPAAAVGVMVPLTPAGLQYTA+VTVASGNYSSTA LIVDTT SMVAFPVCSNVTGVE+G SADEEGGGGDG  CIPFEDTLDEAGEKPCRAGTLDGGTVSLHPEDPPGSQFLPYLQDQA EVSLSTNVSASGSVFATFNTTVADNSGTLDGWDGAAGVLGLARFPHTTC SDGTEVNGSLRSVFSQMDGADSVFALDLGDE YNSTLEIGGYSGS SDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLP EFFDSLMSWLPVEG CPDPENGGMCSISAENAAMELPSLSFRLSQHGQELY+PLS LLL+DGDQPSNSSS+NDG+DRRLCVTREAAIRQSGW+FELPSMQPVVSLGTLPLRSLYAVVDTE+GRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRF+ESYNACEDPSCSSYYLTA
Sbjct:  150 DGAQAATEVGVCRARRWARIRKRGYGTGGPSPGNARSNGRQGRVSISVGDRDSGDVTGPRAPLLISNPRERRRAXXXXXKSPSCAAETLLSKGARAVVVGLLAVTSAQEETTYPAAAVGVMVPLTPAGLQYTANVTVASGNYSSTATLIVDTTVSMVAFPVCSNVTGVEDGGSADEEGGGGDGKVCIPFEDTLDEAGEKPCRAGTLDGGTVSLHPEDPPGSQFLPYLQDQASEVSLSTNVSASGSVFATFNTTVADNSGTLDGWDGAAGVLGLARFPHTTCTSDGTEVNGSLRSVFSQMDGADSVFALDLGDESYNSTLEIGGYSGSSSDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPHEFFDSLMSWLPVEGHCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYVPLSVLLLEDGDQPSNSSSVNDGNDRRLCVTREAAIRQSGWIFELPSMQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFRESYNACEDPSCSSYYLTA 712          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: D8LIV0_ECTSI (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIV0_ECTSI)

HSP 1 Score: 776 bits (2003), Expect = 1.210e-278
Identity = 391/410 (95.37%), Postives = 396/410 (96.59%), Query Frame = 1
Query:  472 MVAFPVCSNVTGVEEGDSADEEGGGGDGNACIPFEDTLDEAGEKPCRAGTLDGGTVSLHPEDPPGSQFLPYLQDQAREVSLSTNVSASGSVFATFNTTVADNSGTLDGWDGAAGVLGLARFPHTTCMSDGTEVNGSLRSVFSQMDGADSVFALDLGDEGYNSTLEIGGYSGSLSDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPVEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLD-DGDQPSNSSSI--NDGDDRRLCVTREAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSSYYLT 1692
            MVAFPVCSNVTGVEEGDSADEEGGGGDGNACIPFEDTLDEAGEKPCRAGTLDGGTVSLHPEDPPGSQ LPYLQDQ  EVSLSTNVSASGSVFATFNTTVADNSGTLDGWDGAAGVLGLARFPHTTCMSDGTEVNGSLRSVFSQM+GADSVFALDLGDE YNSTLEIGGYSGS SDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLM NIT FWPAVVSTGSACLGLPQEFFDSLMSWLPVEGDCPDPENGG+CSISAENAAMELPSLSFRLSQHGQELYLPLSALLLD DGDQPSNS+S   NDG DRRLCVTREA IRQSGW+FELPSMQPVVSLGTLPLRSLYAVVDTE+GRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCS YYLT
Sbjct:    1 MVAFPVCSNVTGVEEGDSADEEGGGGDGNACIPFEDTLDEAGEKPCRAGTLDGGTVSLHPEDPPGSQVLPYLQDQ--EVSLSTNVSASGSVFATFNTTVADNSGTLDGWDGAAGVLGLARFPHTTCMSDGTEVNGSLRSVFSQMEGADSVFALDLGDESYNSTLEIGGYSGSSSDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMGNITTFWPAVVSTGSACLGLPQEFFDSLMSWLPVEGDCPDPENGGICSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDEDGDQPSNSTSTSTNDGVDRRLCVTREATIRQSGWVFELPSMQPVVSLGTLPLRSLYAVVDTEIGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSYYYLT 408          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: A0A0G4J090_PLABS (Peptidase A1 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J090_PLABS)

HSP 1 Score: 136 bits (343), Expect = 4.290e-31
Identity = 103/306 (33.66%), Postives = 151/306 (49.35%), Query Frame = 1
Query:  805 AAGVLGLARFPHTTCMSDGTEVNGSLRSVFSQMDGADSV-----FALDLGDEGYNSTLEIGGYSGSLSDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPVEGDCPDPENGGMCSISAENA-----AMELPSLSFRLSQHGQELYLPLSALLLDDGDQPSNSSSINDGDDRRLCVTREAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVD-TEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSSYYL 1689
            A G+LGLA     T    G   N S  + F ++ G   +      ++DLG  G    L IG   G+ +  V   QW  R+  + P    F    L+VCG S+ +N T  W A+V TG++CL LP EFFD++M+W+P   D P   NG   S+  +        + LPSLSF ++  G  +YLP+  LLL     PS+      G  RR+C+ R+     S  +     ++P+ S G L + +L+A  D +   RVGLA +       +   G N +C A A C+G Q +    NAC+DP CS+Y +
Sbjct:  149 AQGLLGLAYESIATLSCPG-RANASC-TPFERLAGFTGMSYRPLVSIDLG--GPAPQLLIGDVPGARAPPV---QWSDRIPYSRPFFHHFTIHSLSVCGVSMFANYTQHWDAIVDTGASCLSLPGEFFDTVMAWIPSSCDAPVHVNGQYGSMMYQTCYVNETVVNLPSLSFTVTNGGDPIYLPIQNLLL-----PSS------GGRRRICMFRDIDAFSSTAV----QLRPI-SFGALAMTALFASFDMSSAQRVGLANQ-----PGINGTGANDNCKAPAPCIGQQTYWAPLNACQDPDCSNYLV 426          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: L1J2B6_GUITC (Peptidase A1 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J2B6_GUITC)

HSP 1 Score: 125 bits (315), Expect = 5.470e-27
Identity = 84/283 (29.68%), Postives = 125/283 (44.17%), Query Frame = 1
Query:  919 VFALDLGDEGYNSTLEIGGYSGSLSDTVGDVQWGQRLTAAFPSSWGF---------PAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPV-----------------EGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDDGDQPSNSSSINDGDDRRLCVTREAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSSYYL 1689
            +F+LDL D   +S + +G  +G      GD+QW +    A  SS  +           F L +CG  L  NI++ W A+V TG+ACL LPQE FD ++SW P                     C + +N  +C +       +LP LSFR+S+ G  L+LPL++L+++D         +N  D   + + R   I+   +        P +S GTL LR+L+   D     VG+  K     +     G    C+    C G Q F    N C DP C  +Y 
Sbjct:  256 IFSLDLNDPKEDSWMHLGAPAGGW----GDLQWSETQPIAILSSSSYNLRYAFHSLEIFHLQLCGVDLFDNISSHWTAMVDTGAACLSLPQELFDMVVSWTPALNCGPELVPRFDFTDCANSACTESKNLTICYLREGMKEEDLPVLSFRMSEDGPLLFLPLASLMINDRPSGKPRVCLNPADS--IAMYRTEQIKDLLYF-------PKISFGTLALRNLFTSFDMRAMSVGMKNKMTFDSTTYAEIG---VCSKPVTCRGAQTFYAPMNTCVDPDCEQFYF 522          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: A0A7S2TJM4_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJM4_9EUKA)

HSP 1 Score: 120 bits (301), Expect = 6.220e-26
Identity = 100/279 (35.84%), Postives = 135/279 (48.39%), Query Frame = 1
Query:  886 SVFSQMDGAD-SVFALDLGDEGYNSTLEIGGYSGSLSDTVGDVQWGQRLTAAFPSSWG-----FPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPVEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDDGDQPSNSSSI-ND---GDDRRLCVTR-EAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSSYYL 1689
            SVF  + G + SVFALDL     N  LE+      L     D ++   LT       G     F   DL VCG  L  N TA WPA++ T SACL LP+E FD +++W P+         G  C +SA      LP L+F+L+  G+   L LS LLL++ D   N +S+ ND      RRLC+ +  + + Q+G L     + P+ ++G   LR LY   + E GR+G+A K   G         N  C     C GMQ +  S N CEDP C  Y+L
Sbjct:   40 SVFQAITGGNASVFALDL-----NPPLEVNNLPSELHVGGIDPKYEDHLTWTGIQQDGNTTGQFIIHDLRVCGVQLDPNRTA-WPALIDTSSACLTLPKEMFDVIVTWAPLTCLV-----GKECYLSAGRFP-RLPHLTFKLTDKGKTFQLDLSDLLLEETD---NVTSLRNDKTWSQKRRLCMIQGPSMLDQNGHLVN--PLAPI-NIGIRALRHLYVAFNVEDGRIGIASKLSDGSP------TNVQCKEKVPCKGMQSYASSTNMCEDPKCHEYFL 294          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: A0A7S0HVL5_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HVL5_9CRYP)

HSP 1 Score: 121 bits (303), Expect = 2.210e-25
Identity = 85/286 (29.72%), Postives = 131/286 (45.80%), Query Frame = 1
Query:  919 VFALDLGDEGYNSTLEIGGYSGSLSDTVGDVQWGQRLTAAFPSS-------WGFPA---FDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPV-----------------EGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDDGDQPSNSSSINDGDDRRLCV--TREAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSSYYL 1689
            +F+LDL      S + +G  +G   D    ++W +    A  ++       + F +   F L VCG  L  N ++ W A+V TG+ACL LPQE FD ++SW P                     C + +N  +C +   +   +LP LSFR+S+ G  LYLPLS+L+++D  +PS           R+C+  T   A+ ++  + +L    P +S GTL LR+L+   D +   VG+  K     S     G    C+    C G Q +    N C DP C  +Y 
Sbjct:  282 IFSLDLNAPQVESWMYLGAPAGGWKD----MEWSETQPIAIVAASSSYNLRYAFHSLEIFHLQVCGVDLFDNFSSHWTAMVDTGAACLSLPQELFDMVLSWTPALHCVPELVPKFDFTDCANSACTESKNLTICYLGEGSGEEDLPVLSFRMSEEGPLLYLPLSSLMIND--RPSGKP--------RVCLNPTDSIAMYRTEQIKDLLYF-PKISFGTLALRNLFTSFDMQAMSVGMKNKIVFDPSTYSEIGK---CSVPVTCQGAQTYYAPMNTCLDPDCEQFYF 549          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: A0A7S1CM82_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM82_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.080e-23
Identity = 87/271 (32.10%), Postives = 127/271 (46.86%), Query Frame = 1
Query:  919 VFALDL--GDEGYNSTLEIGGYSGSLSDTVGDVQWGQRLTAAFPSSWGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPVEGDCPDPENGG-----MCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDDGDQPSNSSSINDGDDRRLCVTREAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLAQKGDVGDSALGNAGNNT--------SCNAAAVCVGMQRFQESYNACEDPSCSSYY 1686
            V+ALD      G  STL I G   + +D   D+QW ++      + W  P FD ++CG  L  + ++  P ++ + + CL LP E FD+LM+W P   D              C +  +    ELP LSF+L++ GQ L++PLS+L++     P + +  +    R  CV R  AI+ S      P M PV   G+L LRSLY V DT+  +V  A+K  V  S L   G N         +      C G Q +  + N C  P C + Y
Sbjct:  291 VYALDFLAPSSGMLSTLTIDGVDPAYAD---DLQWSEQTYGGENTPWSAPVFDTSICGVRLY-DASSHIPLLIDSSAVCLTLPAEAFDTLMTWAPALCDFAAAAAHSDTFVPPCYLPDDVDEDELPWLSFKLAEDGQRLFVPLSSLIV-----PGDGAEASPDGRRYYCVLRGTAIQASVSSTSDPRM-PVAVGGSLLLRSLYVVFDTDSSKVAFARK--VAPSELATVGRNAKEVEFAGCATPTLGACRGAQVWHAARNVCVAPDCGNLY 549          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: A0A7S3YA41_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA41_HETAK)

HSP 1 Score: 96.7 bits (239), Expect = 2.590e-19
Identity = 57/161 (35.40%), Postives = 88/161 (54.66%), Query Frame = 1
Query: 1078 VCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLP-VEGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDDGDQPSNSSSINDGDDRRLCVTREAAIRQS----GWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLA 1545
            VCG+ L++ ++  WP +V TG+ACL LP+EFF  L+ WL  VE     P+    C +++ + +  LP L+FRL++ G  LYLPLS LLLDDG +              +C+  + ++  +    G         P +S G+L ++SLY   D +  R+GLA
Sbjct:   50 VCGQDLLAGLSGHWPMLVDTGAACLSLPREFFSKLLVWLENVECVANAPDGIKRCYLNSTSDS--LPVLTFRLTEEGGTLYLPLSDLLLDDGQE--------------ICLREDPSVLTTNLDVGSAETYVDPPPYISFGSLAVKSLYFAADFDAQRMGLA 194          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: A0A7S0U0K4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U0K4_HEMAN)

HSP 1 Score: 95.9 bits (237), Expect = 1.130e-18
Identity = 75/237 (31.65%), Postives = 109/237 (45.99%), Query Frame = 1
Query: 1012 QWGQRLTAAFPSSWGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPVE-----------GDCPDPENGGMCSISA----ENAAME-LPSLSFRLSQHGQELYLPLSALLLDD--GDQPSNSSSINDGDDRRLCVTREAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDP 1668
            Q G +L  AF +   F  F L+VCG  ++   ++ W A+V TG+ACL LPQE FDS+ +W P+E            +C DP+   +  I+     E A  E LP +SFRL +  +EL++PLS L++ D  G +P            R+CVT    +     +    ++ P +S GTL L +L    D     VG+  K      A        SC+   VC   Q +    N C  P
Sbjct:   19 QGGGQLPYAFHT---FEVFHLSVCGVDMLQEYSSHWTAMVDTGAACLTLPQELFDSVAAWAPLECARETVPGLDYTECLDPQCTTLKPITVCYLREGADPEHLPVVSFRLGEDAEELHIPLSRLVISDRPGGRP------------RVCVTPGEGVSSYEGVSGA-AVFPKISFGTLALSNLVTTFDLRSMSVGMRSKKRYPPEAF------ASCSLRVVCSKSQTYDARTNTCLPP 233          
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Match: A0A1R4ABR5_BABMR (Uncharacterized protein n=1 Tax=Babesia microti (strain RI) TaxID=1133968 RepID=A0A1R4ABR5_BABMR)

HSP 1 Score: 78.6 bits (192), Expect = 1.060e-11
Identity = 57/216 (26.39%), Postives = 98/216 (45.37%), Query Frame = 1
Query: 1057 FPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPVE-GDCPDPEN-GGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDDGDQPSNSSSINDGD-DRRLCV--TREAAIRQSGWLFELPSMQPVVSLGTLPLRSLYAVVDTEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESYNACEDPSCSSYYL 1689
            F  ++  +C   L    ++ W A++     CLGLP+ F+ SLM  LPV+  DC + EN   +C + +    + + S + +      +L +PL +LL            +ND D ++RLC+  T  + + +S  +   PS    +  G   LR+    VD    ++G   +G          G++  C+A   C G Q +  + N C +P CS + L
Sbjct:  271 FTVYNFKMCNVELFGQTSSNWEAIIDPTCRCLGLPKNFWLSLMKHLPVDPNDCLNDENLPRLCKLKSPFPKLPIISFTLKDDPRSPKLEIPLQSLLF----------KLNDNDTEQRLCIVPTDISGVNRSKAITTFPS----IKFGYQVLRNFKVAVDQGNCKIGFLNRGKF-------IGSDEVCSAKVTCKGDQVYCAAMNTCLNPECSIWLL 465          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1065.460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5KZM9_9PHAE0.000e+089.34Peptidase A1 domain-containing protein n=1 Tax=Ect... [more]
D8LIV0_ECTSI1.210e-27895.37Peptidase A1 domain-containing protein n=1 Tax=Ect... [more]
A0A0G4J090_PLABS4.290e-3133.66Peptidase A1 domain-containing protein n=1 Tax=Pla... [more]
L1J2B6_GUITC5.470e-2729.68Peptidase A1 domain-containing protein n=2 Tax=Gui... [more]
A0A7S2TJM4_9EUKA6.220e-2635.84Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S0HVL5_9CRYP2.210e-2529.72Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S1CM82_9STRA1.080e-2332.10Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3YA41_HETAK2.590e-1935.40Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0U0K4_HEMAN1.130e-1831.65Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A1R4ABR5_BABMR1.060e-1126.39Uncharacterized protein n=1 Tax=Babesia microti (s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1065contigE-siliculosus-1a_F_contig1065:8706..17635 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1695
Model size1697
Exons11
Ec32 orthologEc-20_001630.1
Ec32 ortholog descriptionAspartic peptidase domain
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2DZGB@1,2S70F@2759
Seed eggNOG ortholog2880.D8LIV0
Seed ortholog evalue7.4e-223
Seed ortholog score780.0
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927565.0375838-CDS-E-siliculosus-1a_F_contig1065:8705..91431622927565.0375838-CDS-E-siliculosus-1a_F_contig1065:8705..9143Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 8706..9143 +
1696318588.6236377-CDS-E-siliculosus-1a_F_contig1065:8705..91431696318588.6236377-CDS-E-siliculosus-1a_F_contig1065:8705..9143Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 8706..9143 +
1622927565.050065-CDS-E-siliculosus-1a_F_contig1065:10091..102741622927565.050065-CDS-E-siliculosus-1a_F_contig1065:10091..10274Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 10092..10274 +
1696318588.6353562-CDS-E-siliculosus-1a_F_contig1065:10091..102741696318588.6353562-CDS-E-siliculosus-1a_F_contig1065:10091..10274Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 10092..10274 +
1622927565.059163-CDS-E-siliculosus-1a_F_contig1065:11033..111141622927565.059163-CDS-E-siliculosus-1a_F_contig1065:11033..11114Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 11034..11114 +
1696318588.6429062-CDS-E-siliculosus-1a_F_contig1065:11033..111141696318588.6429062-CDS-E-siliculosus-1a_F_contig1065:11033..11114Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 11034..11114 +
1622927565.0693886-CDS-E-siliculosus-1a_F_contig1065:11573..116501622927565.0693886-CDS-E-siliculosus-1a_F_contig1065:11573..11650Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 11574..11650 +
1696318588.651507-CDS-E-siliculosus-1a_F_contig1065:11573..116501696318588.651507-CDS-E-siliculosus-1a_F_contig1065:11573..11650Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 11574..11650 +
1622927565.081674-CDS-E-siliculosus-1a_F_contig1065:12236..123461622927565.081674-CDS-E-siliculosus-1a_F_contig1065:12236..12346Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 12237..12346 +
1696318588.6617668-CDS-E-siliculosus-1a_F_contig1065:12236..123461696318588.6617668-CDS-E-siliculosus-1a_F_contig1065:12236..12346Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 12237..12346 +
1622927565.094091-CDS-E-siliculosus-1a_F_contig1065:13334..134271622927565.094091-CDS-E-siliculosus-1a_F_contig1065:13334..13427Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 13335..13427 +
1696318588.6713834-CDS-E-siliculosus-1a_F_contig1065:13334..134271696318588.6713834-CDS-E-siliculosus-1a_F_contig1065:13334..13427Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 13335..13427 +
1622927565.107059-CDS-E-siliculosus-1a_F_contig1065:13935..141201622927565.107059-CDS-E-siliculosus-1a_F_contig1065:13935..14120Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 13936..14120 +
1696318588.684713-CDS-E-siliculosus-1a_F_contig1065:13935..141201696318588.684713-CDS-E-siliculosus-1a_F_contig1065:13935..14120Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 13936..14120 +
1622927565.1181798-CDS-E-siliculosus-1a_F_contig1065:14814..149361622927565.1181798-CDS-E-siliculosus-1a_F_contig1065:14814..14936Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 14815..14936 +
1696318588.6966634-CDS-E-siliculosus-1a_F_contig1065:14814..149361696318588.6966634-CDS-E-siliculosus-1a_F_contig1065:14814..14936Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 14815..14936 +
1622927565.1293426-CDS-E-siliculosus-1a_F_contig1065:16040..161821622927565.1293426-CDS-E-siliculosus-1a_F_contig1065:16040..16182Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 16041..16182 +
1696318588.709833-CDS-E-siliculosus-1a_F_contig1065:16040..161821696318588.709833-CDS-E-siliculosus-1a_F_contig1065:16040..16182Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 16041..16182 +
1622927565.1390412-CDS-E-siliculosus-1a_F_contig1065:16950..171151622927565.1390412-CDS-E-siliculosus-1a_F_contig1065:16950..17115Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 16951..17115 +
1696318588.7186918-CDS-E-siliculosus-1a_F_contig1065:16950..171151696318588.7186918-CDS-E-siliculosus-1a_F_contig1065:16950..17115Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 16951..17115 +
1622927565.1491666-CDS-E-siliculosus-1a_F_contig1065:17535..176341622927565.1491666-CDS-E-siliculosus-1a_F_contig1065:17535..17634Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 17536..17634 +
1696318588.7281728-CDS-E-siliculosus-1a_F_contig1065:17535..176341696318588.7281728-CDS-E-siliculosus-1a_F_contig1065:17535..17634Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1065 17536..17634 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1065.460.1prot_E-siliculosus-1a_F_contig1065.460.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1065 8706..17634 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1065.460.1

>prot_E-siliculosus-1a_F_contig1065.460.1 ID=prot_E-siliculosus-1a_F_contig1065.460.1|Name=mRNA_E-siliculosus-1a_F_contig1065.460.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=565bp
WGEGARAVTEVGVRRARRWARIRRRGYGTGGASPGTARSDGAQARSSRSV
GDSGGGGNTGPRAQLLISNPGERRRACCAGGNSPSSAAESLLSKGATAVV
MGLLAVASAQEETTYPAAAVGVMVPLTPAGLQYTADVTVASGNYSSTAAL
IVDTTASMVAFPVCSNVTGVEEGDSADEEGGGGDGNACIPFEDTLDEAGE
KPCRAGTLDGGTVSLHPEDPPGSQFLPYLQDQAREVSLSTNVSASGSVFA
TFNTTVADNSGTLDGWDGAAGVLGLARFPHTTCMSDGTEVNGSLRSVFSQ
MDGADSVFALDLGDEGYNSTLEIGGYSGSLSDTVGDVQWGQRLTAAFPSS
WGFPAFDLAVCGRSLMSNITAFWPAVVSTGSACLGLPQEFFDSLMSWLPV
EGDCPDPENGGMCSISAENAAMELPSLSFRLSQHGQELYLPLSALLLDDG
DQPSNSSSINDGDDRRLCVTREAAIRQSGWLFELPSMQPVVSLGTLPLRS
LYAVVDTEVGRVGLAQKGDVGDSALGNAGNNTSCNAAAVCVGMQRFQESY
NACEDPSCSSYYLTA
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1065:8706..17635+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1065.460.1 ID=mRNA_E-siliculosus-1a_F_contig1065.460.1|Name=mRNA_E-siliculosus-1a_F_contig1065.460.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8930bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1065:8706..17635+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGGGGTGAGGGGGCGCGGGCGGTTACAGAGGTGGGCGTTCGCAGGGCCCG CCGATGGGCGCGCATCCGCAGAAGAGGCTATGGCACCGGCGGCGCCAGCC CAGGCACCGCCAGGAGCGACGGGGCACAAGCAAGATCAAGCAGAAGCGTT GGAGATAGCGGCGGTGGGGGCAACACCGGACCCCGGGCACAGCTCCTGAT TTCGAATCCTGGGGAACGCCGAAGAGCTTGTTGTGCTGGTGGCAATAGCC CTTCTTCTGCGGCTGAATCGTTGCTTTCCAAGGGAGCCACGGCCGTGGTG ATGGGCCTGCTGGCTGTTGCGTCTGCGCAAGAGGAAACTACCTACCCCGC TGCCGCGGTAGGGGTGATGGTGCCCCTGACCCCCGCGGGGCTGCAGTACA CGGCGGACGTGACGGTTGCCTCCGGCAACTATTCGTCGGTGAGACATGCA GGGCTCCGGGGTGTCAGAAACGCCTTGCTTGCGAAATATCAAGCGGTTTA TATGTGTTGTCGGATAGCACTGCTGTGTAGGGTAATACGACGGCACACCA GTTGAACCTCGTGATTGGCATTACAATGTTCGCGCTGTTTAGCGATGGAT GGAGCAACCTTAGCGTCGCCTTCTGCCGCTGCAACCATTGAGCTGTATCA TTTTTCCGGCCAGTGTTCCGTCGGGGTTTTGAGAATGTCCTAGAAGGCTT CTGGGGCTTGCCGAACAGGTCTGGGTTCCAATCTGTTGTGACCCTCAGGC GGCGCAAGATAGAAACGGCTACACTGGTTCGAAGCTACATGCCATTCATC ATGGCTAGGCACGTTGTTCGCCGTGCCTAACTTCTACCCAAACAGAAGCT GCTGGGTCCAAATCGGCGCGAGAGTAGACACACAAGTAGCTAGCAAGAGG GAACGATCGACACCAGAACTACTCCACCCCCTGGGAGTTTCGGCGACTGT CTGTGTCTGGTGCGGCTTTTTTGCCTCGAGAACCGGACTCGAACGATGTG TTTGTACTTCCCTCAAATGGAGTGTTCAGCCTAGTTATTCTCCTCTAGGG CGTCGTTGTCTTGGTCATGTTTCTCACCGCCGTCGCCGTTGCAACGCCTG CGACGGACACACGCGCGCGTGCTTACACACAGGGGGCGAACTTCCGCAGC GCGGACTACAGATACACCACGTTTTGCGTTTTTCGGTCCCATCAAGGCCG GCACCCCTTGTAAAGTGTCGGCCTGCTGAATCTAACAGCGCAGTGGATCG ATGCTCGCCACACAAAAATCCACAGGCACGACAACACGAAACTAAGGACA TCAATTACCGCGTCCTTAATCCCCCCCCCCCACACACACACACCTCTTGC CCTCGCCCGCATACCTGTTTCTTCAACGTACCCTAGACGGCCGCCCTGAT CGTGGACACTACCGCAAGCATGGTGGCGTTTCCGGTGTGCTCGAACGTGA CGGGTGTTGAGGAAGGGGACTCCGCGGATGAGGAGGGGGGCGGCGGCGAC GGAAATGCTTGCATCCCCTTCGAAGACACGCTGGACGAGGCTGGGGAGAA GCCCTGCAGAGCTGGAACGGTGGGTGATAATGGCCATTTACGGCACGGTA CAGTTGGAGGCGCGGGGTGTGGTCGTGTACGGCATGTGGGTGGTACATGC GGATGCAGAGCGACAACTATGAGTGCGGAATGGCGTTGATGCTTGGGGTC GTTGGGCGATAGCGCCTACATTCGCGAACAGAGGCCTTGTGGCGGTAGCA CCCGCAACCTACCATTGAGCTTTGGCCGTTCTTTGGCCGTTCTTTGCCGG TTGAACCCCGCGTCAGAGATTCCTTCGAAAACGTGAGACAGTTGGCCGTT GCTTGGTCGGGCGGGTCAGCCGTGTGCTTGTCTGGAAGGATTAGTTTGTG TCATGTACGGTCGACACGCTTGTCGCACGTAGGAGAGACTCTTCCTTGGT TGGTTACTACAAGGGCCACCGGTTGTCACCGCCCGGAGTTCGGCGTGCGC CCTACCGGAGGACCAAGAGGCGCCGTTGTTCACTATTTCTCGAAGAACTT GAGACGAATCCACTGTACGCGTCTTCTCCCCTGTGCACATGCGCCCGCAC CCTTCCGCCCGCCGACCTTATTGCAGCTGGGTTTGCCGTGTTGCTCAAGT CGCCGTTCATCCTTATTTTTTTTTTCTGGCCTTTTTGTGCCTTGCTTGGA CTCGCCTTTTCGTTTGTGGATAACGAATGCTGCTCGTTACACACGCGAAC ACATAACCAAAATTTTGGAAAGTGGTATTTTTTTTTTTGTCTGATTTTGT TCTTTGGCACTCTTCGCGCGCGTGAAAGCTGGACGGAGGGACCGTTTCCC TTCACCCTGAGGACCCTCCTGGCAGCCAATTCCTCCCCTACCTTCAAGAT CAGGCACGTGTCGCGGTGAACGTTCGATCCAGTAGAACGCAGAAGGATGT AGCGGGGGCGGGAGACGGCATCAGAAAGACGCCGGGAGGCCGGGGAGACA GAGGGGCGGGGTTTAAGAGTAGGTTTCCTGAAGCCGGCATGGGGGTGAGG GAGGCGAGGTGTGTAATCTCAGAGAGACCGCGGCAATAAGAAAAAGGAAG CCCAAGGCCACCTGAAAAAGAGACCGGGGCAGAATAGATGGAGGGCACGA GGAGAAGCCCGGAGACGATGCACCCTGTCTTTTCTGCTCGAGATTCGCGC CTTGTACAAAGCTTAGATGCAGCGGCGAGCTTTTCGTGGCTGGCACCCGC GTGAAATGCTTTTGTCCCGTTTTGGGACTACGTGTCGACCGTTTCTCGTG GCGATTATTTCCCCACGCCTTTTCTCTCTTTGTTTTGTTCCTGCTTGTGG TGCCCTTTTCTTCCGTAGGAGGTATCCCTCTCGACGAACGTAAGCGCATC AGGAAGCGTTTTCGCGACGTTCAACACGACCGTCGCCGATAACAGGTATG TGTATGTGCCCGCGCATTCTTCATGTTTTTCGGTCGACGCACGTACGATG TATGTGTGTGTGTGTTTGTGAATGTTTTGTTGGTGTTTGACCGCGCACCA AACGGCCGGCGATAGAAGAAATATATCTGGGCCAGCGAGACAAAAAAATA TGTTTTCTGCGAATTTGTTTTGTGTGTTTGATTGGCATTGGTTACGTGTT CGTTTTTCTTGAGTTGGCATCGACCGTGCTGCATACCCGGCTAACTAGTG AAATATGTCAGGCTGTGTGTTTATTCTTTGTTGGGCCTCAACCGCGCCAA CCAGCTGACCTATTAAATATCCCTCTCTTAGTTTGTGTTTCTGCTGTTTG AGCAGTTTTTCTTTTGTTTGTTTGTTTGATGTTTGTCAAATGATGTCGTT TTGCCCTGTCCACATGAACAGCCCTCATTTCTCTCGCAGGCTTTGTTTCC CCGGCTGCCGCCAAACCTAGACGACCATCCAGACCCCGCACGCTTGTGCC ACACCCCCCGTGCCCTCTCCCTCCCTCCCTCCCTCCCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCCCGCCCCCTCAGTGGCACCCTCGACGGCTGG GATGGCGCCGCTGGGGTGCTGGGCCTAGCTCGGTTCCCCCACACGACCTG CATGAGCGATGGGACTGAAGTCAACGGCTCTCTACGGTCAGGTGTGATGG GGGGTAGCGACGCAGGGACGGCGGTAGACATGTTTGTGGAGTGTCAGCGT TCGTGGTGGATGTCATTGTTGTTGTTGGTGGTGGTGGTGCTGGCGGTAAG GTTTTAGCTGGAGTATGTCGTCGCCATGAAGTGGAGATCCTACCCGCCAG AAATGCTGTATGCGCTGGTGTTAAAGTGATAAAAACAAGACAAAAAATGG CATTCCTCTCGCGTGTGGCGGCTGGTTGTCTGGGGTCCTGCAACCTCTGG TTCGATACCCCATGTATTTTGCGCTTCAGAGTTATATACGGAGGGGTCCC TCGTTGACTTGTAGTGTTTAGACGAGCGCGCCTTTCGAGCCGGTGGCACT GCAGGTTTGGTTGGCGATAGGGCCTGAATGACCCCCGAAGGCACCGCGTT TGAATCTGGTCTACGGCAGGAAGCCTCACTGACAAAGCTTCAACACATTC CCGCGAGGGGTGTTGTGCCTCGGCTCATTTTGGAAGTTTGTTCTTCGCAG AAGCTTGTTGAGAGAGTAGGTTGGAGAGGTAGAGGCATATAGAAGGGAAG AAAGATCGGTCCCAGTTGGCACGCTCTCGTCGCATCCTGCTATTTGGCCC TTCTCTCTGTTCAAAGTCCAAATGGCCCCATGAAATCCCAGACCAGCAAG CAGGGTCCTCAGAGTTGTTGTTGTCGACATCACGAGCATGAACTAAACGA TATGGCCGGCGAAACGACACTATACATGTATGATGAATCGATACAATAGG GACACGATAGAATGAAATGCTTGATACGAAGAATCAGTACAATGCACGAC GGCGATACTTCGGATGATACCATCCGCACTACTCCAGAGTGCACGAAACG ATACAATGGGTGAAGGAATATTACAATGGAGATATGCGCGAAACGATACA ACGAACGAAATGGTACAACGGGTGAAACAATGCAAATTAACCAACACGAT ACGTCGGGCGGGATGAACGCCACCCGCAGTATTTTCGCAGATGGACGGCG CAGACTCGGTCTTCGCGCTGGACCTTGGAGACGAGGGCTACAACAGCACC CTCGAGATCGGCGGATACAGCGGTAATAAGACTACGACCGAGGACTTTTC GAACGGTTTTATGGGGTCACGGGTATGCCAGACGAGAAAACACCACCACT CTTGTGTCTAATAGCGGTTGGTTTTCTGTAACAGAACAGAGGGCATTTTG GTACAACTCTATCAGCAATGGAGCGAAGACGTGAGGCAGTGAGAGATAGC GAGGCTACCAAGCCAGCGTGTTCCAGCGGGGGAGGGGGGGCGTCGAAGCA CCAGACTTGAAAACGAAAGACCGCCCTTTTTTCTCTCGTTTTTTGCCACG GTCTTGAACGATAACGCTGCTTGGAAATGGAGCCCGGTTTTTTAGGATCG GGTTGCGTTCGTTCTATCCCGTCATGAAAGCCGGTCGCCCCGGGAGGCTA TCGGCGTTCTTGGTAACTTACTGCCCAATACGCTTTATCTTGGCCGGACT GTATGGATTCTCCGCCACGTGTCTAACGCGTCACGGGACACCGCCCGGTT TCCCAAACACGCGAACGCACGACACTACAGGCTCGTTGAGCGACACAGTC GGTGACGTCCAGTGGGGACAAAGGCTTACGGCGGCTTTCCCCAGCTCTTG GGGCTTCCCGGCCTTCGACCTTGCCGTCTGCGGTCGGAGCTTGATGAGTA ACATCACGGCCTTCTGGCCCGCGGTGGTGTCGACGGGGTCGGCTTGCTTA GGCCTTCCGCAAGAGGTTTGTGCTGTTTTTTTTTTTTTGGTGGAATGGCA GTGGTGACGGTGTTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGT GGCTTTGCTGTTGTCAGAAAGAGTTTTCTGCCTTTGTTTTCTTTTTAGTG AAATGGTGGTGACGGAGGTTTGTGGCGTTGTTGTTGGCGGCCGTGGTGGT TGTGGTTGGTACCTAGCTGTCGCCGTTTTCCCTTGTTGTCGCCGTTTTTT CTGCTGTCGATGTGTTCGCTTCGGCCGATGGTGTGGTGTGATGGGTTGGT AGATCGTTTTGGTTGATGGCTTCGGCCTTGCTCTCTCGATGAGCAACGGT AGATATGTAGAGACACACCTTTCTGCACAGCTGCGCTTCACATTTCGGGT CGTGTCGTCCCTGGAAACCGATCCCAGTCACTAACGATGAGTCCCGCACC CCCCCCCCCCCCCCCCCCAAATGCTGTCGCATTGCCGACTCGCTGGACTT TTTTATGGCGAAATTTCCGCAGCGGTGGTACATTCAAGCTGCAATGGTGT AGACGACGCCCGCAATGCACTGCGTGTAGCCGGCTCTACGAAAAGGGATG GTTGATTTGCGCTTGTCAAAACTTGTGTCGCAATCGCGCCGTTCCCCCGT CCCACTCCGTGACGCCGTCCCCTGTCCCCTCCCCAACGCCTACGCCTACG CCTGTGCAGTTTTTCGATAGCCTGATGTCGTGGCTTCCAGTGGAAGGAGA TTGTCCCGATCCGGAAAACGGCGGCATGTGCTCTATTTCCGCGGAGAATG CTGCCATGGAGCTTCCCTCTCTGTCATTCAGGTGCCTCCTGGTTTCCCGC TATTTAGGCTGCCTTGTTGTGCTACATTCCTGTCTGGTTGTGTTGGGCTC GTGTTCTCTCTCTCTCTCTGATTGTTTCTCCCTTCTCTCTCTGCCTCTCT CTGCATGTAGACGGCGTAACAGGGGAAGATGTGTGCCGACCGTTGGTGGC CGTTTTTTGGATCCGTTCCGTGGTAGTATATGTTGTGGTTGTTGTTGTTG CTATCGTTGTCGTTGTCGTCGTCGTCGATGCCGTTGCTAGTTTTTCGCTC GGGTAGGGCGTACACCAAAAGTCCTGAGCAAAAGTCGTCCCATTTTCCTA GAGTAGATGGCTGGTTTTTCTGACGATGGGCATGGAACGATTGCTCGCCA ACGACTCGCAGGAGTAGATTAATATCAATAGATTTATATCGAGTGATACG AGAATATCAATTCGAAGCGGGGAGAGAGCGTTGGTTCGAGTGCGTGTGGG TTGGTTTGTTGACTGGGTGATGGTCATGACGCCATGGCACACTAGGTGGA ACTCATGCTCATGGCGTCTAGTTTGTTGCCAAGACTGCGTCAAGAGCATC TCATCGGACTGGGGTTGTCTGATACGTTGGCTTCTTTTTTCGTCCTCGGT TAACGGCGGTAGTCTCCCGGCGGTGTCATGTGTTTTCTTTTTGTTTTGAC CTTGGTATCGAGGGGGTGCTTATTTTGATCGACAGCGAAGAATGTCCCAT GTTTATTCCAAGGCACGCACGCCTGATCGGGACCTCGAAAAGACAGAGAG AAGCAGTCGCGCCGGGTTCGAGTGCCGCTTCACTTCCTTGGAAGCCATTC TGCCCGAACTTTTCACTGTGGCTGCCCTCACCCTACACTGTTTTGATTTA CGCTGGGAGTGCTACGCAGGTGTCCTTGTGCGGTTTCGAAGGCAACGATG CTTGGCAACATTTCGGTCCTTTATGTTTTCTTGTCTTTAGGTAGTGAAGA ATGTCTCATTTTTTTTGTTTCGGTCTCGCAACCAACAGCCGGAAGGCACA CGCACATATGGGAGCCATCGACTTTGTTTTGTTACATTTACATTCCCCTC CGAATCGCTTGCTTATGGCTCTCGTGTGCCACTAGGTTAAGCCAACACGG GCAGGAACTGTACCTCCCCCTGTCAGCGCTGCTGCTCGACGATGGAGACC AACCTTCCAACAGCAGCAGCATCAACGATGGCGATGATAGACGACTCTGC GTCACTCGAGAAGCCGCCATTCGCCAGGTATCGCGCCGTGTGAAACACGG ACAATGGCATGCTGGTTGCCCTATCGTACTACACCGAATCGTGTGAACGT TGTGGTTTCGAGGGGCCCACGGTTTCACGTCGAGACTTGCGGTAATTCCG CGTTTTTGCGCCGTACCGTACCGTGCGAGAGGGCCGTTTCGTTCTGTAAC CGTGGCTGGGACGTCACCACGAGGTTACGGTAGGAAATATCTTACCCCTG CTGGTAGTGGAAGAAATCCCAGGAAATTCGAGAAGACCATTAAAACACGA GAGTAAAGTACAAAGAACAGATGACTTTGTCCGGATGAAGGAGCGAGCAA GACTTGATGTCGAGCGGCAGCCGCAGCGGCAGCGGCAGCGGCACCAACAA TAACAGGAAAGAGAATCGAGATAGGCTTGGCATACCATCTGCCCGCGCCA TAGTGAAACTCTCCGGTCGCGATTTTCACCGTAGCTCCCAATGGCATCGC TGAGCGCAAGGCATGCATCTATCGGGCGTCGTTGTCCGTAGCTTTTTTTG TCGCCCACGGTTGTACTCCTGCTTGTCCGCACGCACCGATTGGTACGGAT TTGGTGTCTCCTTTTGTTCGTGCCTTCCTCGTATCGTCATATGTTGCTCT TAAGTTTTGGTATGGATGTTCGGGGCCCGTTGCCTCAGCGTCTGAAACAG CATGGACAACTACCCACTAGATACTCCAATGCCCGCCCCGGTTCAAGTAA CAGTTTCCCATCAACAATCCTTCCATGAAAATCCTTTTACGGCAGTCCGG GTGGCTCTTCGAGCTGCCCTCGATGCAGCCAGTGGTGTCCCTCGGCACCC TCCCGCTGAGGTCGCTTTACGCCGTCGTGGACACCGAGGTCGGTCGCGTC GGCCTTGCACAAAAGGGAGATGTCGGAGATTCCGCCCTGGGAAACGCCGG CAACAACACGGTGAGAACCTACCCCTACCTCTACCCCCTCCGATTGCAGG CAGCGTTATTGGGGTTTTGTGGGATGTGCCGGTGGCGGCCATGGGGCATA TGCAGCATTCATTGGCCTTTGCCTCGAAACCCTAGAGTCTGGTGGTCTGG TCTCGGCAGTGAGGTAGTCCCAGAATGACATTATTGTAGGTCTGGTGGAG CAGTTGACATATGCCGTGTATTGTTTGTTGTCGCTGTCGTTGGTGGTGGT GCGGTGAACTATCTTCTACGGTTGTTTTGTGCTGGTGTTATTGGTGCCGT TATTGTCGATGATCTTGGTGTTGATGTCGTCAGTACTAACCAAACGTCAC TCCGCGCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCGTCCTCCTTGA ACCTCTCGCTTCTCCAACCGGATGAAACAGAGCTGCAACGCCGCCGCGGT GTGCGTGGGAATGCAAAGGTTCCAGGAGTCCTACAACGCGTGCGAAGACC CCTCCTGCTCCTCCTATTACCTCACGGCAC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1065:8706..17635+

>mRNA_E-siliculosus-1a_F_contig1065.460.1 ID=mRNA_E-siliculosus-1a_F_contig1065.460.1|Name=mRNA_E-siliculosus-1a_F_contig1065.460.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3390bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1065:8706..17635+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGGGGTGAGGGGGCGCGGGCGGTTACAGAGGTGGGCGTTCGCAGGGCCCG
CCGATGGGCGCGCATCCGCAGAAGAGGCTATGGCACCGGCGGCGCCAGCC
CAGGCACCGCCAGGAGCGACGGGGCACAAGCAAGATCAAGCAGAAGCGTT
GGAGATAGCGGCGGTGGGGGCAACACCGGACCCCGGGCACAGCTCCTGAT
TTCGAATCCTGGGGAACGCCGAAGAGCTTGTTGTGCTGGTGGCAATAGCC
CTTCTTCTGCGGCTGAATCGTTGCTTTCCAAGGGAGCCACGGCCGTGGTG
ATGGGCCTGCTGGCTGTTGCGTCTGCGCAAGAGGAAACTACCTACCCCGC
TGCCGCGGTAGGGGTGATGGTGCCCCTGACCCCCGCGGGGCTGCAGTACA
CGGCGGACGTGACGGTTGCCTCCGGCAACTATTCGTCGTGGGGTGAGGGG
GCGCGGGCGGTTACAGAGGTGGGCGTTCGCAGGGCCCGCCGATGGGCGCG
CATCCGCAGAAGAGGCTATGGCACCGGCGGCGCCAGCCCAGGCACCGCCA
GGAGCGACGGGGCACAAGCAAGATCAAGCAGAAGCGTTGGAGATAGCGGC
GGTGGGGGCAACACCGGACCCCGGGCACAGCTCCTGATTTCGAATCCTGG
GGAACGCCGAAGAGCTTGTTGTGCTGGTGGCAATAGCCCTTCTTCTGCGG
CTGAATCGTTGCTTTCCAAGGGAGCCACGGCCGTGGTGATGGGCCTGCTG
GCTGTTGCGTCTGCGCAAGAGGAAACTACCTACCCCGCTGCCGCGGTAGG
GGTGATGGTGCCCCTGACCCCCGCGGGGCTGCAGTACACGGCGGACGTGA
CGGTTGCCTCCGGCAACTATTCGTCGACGGCCGCCCTGATCGTGGACACT
ACCGCAAGCATGGTGGCGTTTCCGGTGTGCTCGAACGTGACGGGTGTTGA
GGAAGGGGACTCCGCGGATGAGGAGGGGGGCGGCGGCGACGGAAATGCTT
GCATCCCCTTCGAAGACACGCTGGACGAGGCTGGGGAGAAGCCCTGCAGA
GCTGGAACGACGGCCGCCCTGATCGTGGACACTACCGCAAGCATGGTGGC
GTTTCCGGTGTGCTCGAACGTGACGGGTGTTGAGGAAGGGGACTCCGCGG
ATGAGGAGGGGGGCGGCGGCGACGGAAATGCTTGCATCCCCTTCGAAGAC
ACGCTGGACGAGGCTGGGGAGAAGCCCTGCAGAGCTGGAACGCTGGACGG
AGGGACCGTTTCCCTTCACCCTGAGGACCCTCCTGGCAGCCAATTCCTCC
CCTACCTTCAAGATCAGGCACGTCTGGACGGAGGGACCGTTTCCCTTCAC
CCTGAGGACCCTCCTGGCAGCCAATTCCTCCCCTACCTTCAAGATCAGGC
ACGTGAGGTATCCCTCTCGACGAACGTAAGCGCATCAGGAAGCGTTTTCG
CGACGTTCAACACGACCGTCGCCGATAACAGGAGGTATCCCTCTCGACGA
ACGTAAGCGCATCAGGAAGCGTTTTCGCGACGTTCAACACGACCGTCGCC
GATAACAGTGGCACCCTCGACGGCTGGGATGGCGCCGCTGGGGTGCTGGG
CCTAGCTCGGTTCCCCCACACGACCTGCATGAGCGATGGGACTGAAGTCA
ACGGCTCTCTACGGTCAGTGGCACCCTCGACGGCTGGGATGGCGCCGCTG
GGGTGCTGGGCCTAGCTCGGTTCCCCCACACGACCTGCATGAGCGATGGG
ACTGAAGTCAACGGCTCTCTACGGTCAGTATTTTCGCAGATGGACGGCGC
AGACTCGGTCTTCGCGCTGGACCTTGGAGACGAGGGCTACAACAGCACCC
TCGAGATCGGCGGATACAGCGTATTTTCGCAGATGGACGGCGCAGACTCG
GTCTTCGCGCTGGACCTTGGAGACGAGGGCTACAACAGCACCCTCGAGAT
CGGCGGATACAGCGGCTCGTTGAGCGACACAGTCGGTGACGTCCAGTGGG
GACAAAGGCTTACGGCGGCTTTCCCCAGCTCTTGGGGCTTCCCGGCCTTC
GACCTTGCCGTCTGCGGTCGGAGCTTGATGAGTAACATCACGGCCTTCTG
GCCCGCGGTGGTGTCGACGGGGTCGGCTTGCTTAGGCCTTCCGCAAGAGG
CTCGTTGAGCGACACAGTCGGTGACGTCCAGTGGGGACAAAGGCTTACGG
CGGCTTTCCCCAGCTCTTGGGGCTTCCCGGCCTTCGACCTTGCCGTCTGC
GGTCGGAGCTTGATGAGTAACATCACGGCCTTCTGGCCCGCGGTGGTGTC
GACGGGGTCGGCTTGCTTAGGCCTTCCGCAAGAGTTTTTCGATAGCCTGA
TGTCGTGGCTTCCAGTGGAAGGAGATTGTCCCGATCCGGAAAACGGCGGC
ATGTGCTCTATTTCCGCGGAGAATGCTGCCATGGAGCTTCCCTCTCTGTC
ATTCAGTTTTTCGATAGCCTGATGTCGTGGCTTCCAGTGGAAGGAGATTG
TCCCGATCCGGAAAACGGCGGCATGTGCTCTATTTCCGCGGAGAATGCTG
CCATGGAGCTTCCCTCTCTGTCATTCAGGTTAAGCCAACACGGGCAGGAA
CTGTACCTCCCCCTGTCAGCGCTGCTGCTCGACGATGGAGACCAACCTTC
CAACAGCAGCAGCATCAACGATGGCGATGATAGACGACTCTGCGTCACTC
GAGAAGCCGCCATTCGCCAGGTTAAGCCAACACGGGCAGGAACTGTACCT
CCCCCTGTCAGCGCTGCTGCTCGACGATGGAGACCAACCTTCCAACAGCA
GCAGCATCAACGATGGCGATGATAGACGACTCTGCGTCACTCGAGAAGCC
GCCATTCGCCAGTCCGGGTGGCTCTTCGAGCTGCCCTCGATGCAGCCAGT
GGTGTCCCTCGGCACCCTCCCGCTGAGGTCGCTTTACGCCGTCGTGGACA
CCGAGGTCGGTCGCGTCGGCCTTGCACAAAAGGGAGATGTCGGAGATTCC
GCCCTGGGAAACGCCGGCAACAACACGTCCGGGTGGCTCTTCGAGCTGCC
CTCGATGCAGCCAGTGGTGTCCCTCGGCACCCTCCCGCTGAGGTCGCTTT
ACGCCGTCGTGGACACCGAGGTCGGTCGCGTCGGCCTTGCACAAAAGGGA
GATGTCGGAGATTCCGCCCTGGGAAACGCCGGCAACAACACGAGCTGCAA
CGCCGCCGCGGTGTGCGTGGGAATGCAAAGGTTCCAGGAGTCCTACAACG
CGTGCGAAGACCCCTCCTGCTCCTCCTATTACCTCACGGCAAGCTGCAAC
GCCGCCGCGGTGTGCGTGGGAATGCAAAGGTTCCAGGAGTCCTACAACGC
GTGCGAAGACCCCTCCTGCTCCTCCTATTACCTCACGGCA
back to top