Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
D7FSV5_ECTSI (Fatty acid desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSV5_ECTSI)
HSP 1 Score: 253 bits (647), Expect = 1.180e-80
Identity = 124/136 (91.18%), Postives = 128/136 (94.12%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTPFCLG 408
LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYR LVPLVRKFAEENGIEYRATPQWEIIKDN+AL+ + +P G
Sbjct: 314 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRQLVPLVRKFAEENGIEYRATPQWEIIKDNLALLKRVGSSPVMPG 449
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
A0A6H5JY43_9PHAE (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY43_9PHAE)
HSP 1 Score: 195 bits (496), Expect = 1.660e-59
Identity = 94/145 (64.83%), Postives = 114/145 (78.62%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAED-------------DSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTP 396
LALHYC L ALVPLPVAIGH+F+GGWLTA +VTVTHTAEE++ +D D+S+VETQF+TTRDA+ P++E++WGGMQYQLEHHLFPTIPRYKY LVPLV+KFAEENG+EYR+T WEII+DNI + + P
Sbjct: 166 LALHYCWLLALVPLPVAIGHVFVGGWLTAIIVTVTHTAEEFSVKDEPAHPSSPFEEEGDASFVETQFKTTRDAVCGDPLSEHLWGGMQYQLEHHLFPTIPRYKYPDLVPLVKKFAEENGLEYRSTGSWEIIRDNIKQLKRVGEAP 310
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
D7G2Y4_ECTSI (Fatty acid desaturase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y4_ECTSI)
HSP 1 Score: 197 bits (501), Expect = 3.290e-59
Identity = 94/145 (64.83%), Postives = 115/145 (79.31%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAED-------------DSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTP 396
LALHYC L ALVPLPVAIGH+F+GGWLTAT+VTVTHTAEE++ +D D+S+VETQF+TTRDA+ P +E++WGGMQYQLEHHLFPT+PRYKYR LVPLV+KFAEENG+EY++T WEII+DNI + + P
Sbjct: 259 LALHYCWLLALVPLPVAIGHVFVGGWLTATIVTVTHTAEEFSVKDEPAHPSSPFEEEGDASFVETQFKTTRDAVCGDPFSEHLWGGMQYQLEHHLFPTLPRYKYRDLVPLVQKFAEENGLEYKSTGSWEIIRDNIMQLKRVGEAP 403
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
A0A836CAU7_9STRA (Fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAU7_9STRA)
HSP 1 Score: 170 bits (430), Expect = 1.770e-48
Identity = 82/132 (62.12%), Postives = 101/132 (76.52%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTP 396
L+LHY L ALV VA+GHI LGG LTAT+VTVTHTAEE +D+ S+VE QFRTTRDA P++EYVWGGMQYQLEHHLFPT+PRYKY LVP+++++A ENG+EYR T W+II DN+ + + P
Sbjct: 295 LSLHYVALLALVGPGVALGHIMLGGLLTATIVTVTHTAEEMLMDDEMSFVEAQFRTTRDAKCTDPLSEYVWGGMQYQLEHHLFPTLPRYKYARLVPVIKQWAAENGLEYRVTGAWKIIADNVNQLKRVAAQP 426
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
A0A7S4PM16_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PM16_GUITH)
HSP 1 Score: 148 bits (374), Expect = 1.040e-42
Identity = 69/132 (52.27%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTP 396
LA HY + VP +G +FL G++TA + TVTH +EE +++ +VE QFR+TRDA+ P +E++WGGMQYQLEHHLFPT+PRY+Y LVP V+KFAEENG+E+R TP++E++K N L S + P
Sbjct: 26 LACHYAFMLYWVPAGTFVGALFLSGFMTAIITTVTHQSEELFFDENPEFVEGQFRSTRDAVCSNPFSEWLWGGMQYQLEHHLFPTMPRYRYPALVPHVKKFAEENGLEFRITPEFELLKMNWKLYSDIAKLP 157
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
A0A7S0LKA8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKA8_9EUKA)
HSP 1 Score: 147 bits (371), Expect = 7.570e-41
Identity = 67/132 (50.76%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTP 396
+AL+Y +A L+P VA+GH+FL G ++AT+VTVTH +E+ +V+ Q R+TR+A+T P++E++WGGMQYQLEHHLFPT+PRYKYR L P+VR++A E G EYR +W+I+ N+A++ + H P
Sbjct: 156 IALNYLWMALLLPPAVAVGHVFLAGLISATIVTVTHQSEDLFDGLQHDWVDAQLRSTRNAVTSNPLSEWLWGGMQYQLEHHLFPTMPRYKYRALSPIVRRWAAEAGAEYREDGEWQILCRNLAMLQHVAHQP 287
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
L1IL22_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IL22_GUITC)
HSP 1 Score: 148 bits (374), Expect = 1.200e-40
Identity = 69/132 (52.27%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTP 396
LA HY + VP +G +FL G++TA + TVTH +EE +++ +VE QFR+TRDA+ P +E++WGGMQYQLEHHLFPT+PRY+Y LVP V+KFAEENG+E+R TP++E++K N L S + P
Sbjct: 246 LACHYAFMLYWVPAGTFVGALFLSGFMTAIITTVTHQSEELFFDENPEFVEGQFRSTRDAVCSNPFSEWLWGGMQYQLEHHLFPTMPRYRYPALVPHVKKFAEENGLEFRITPEFELLKMNWKLYSDIAKLP 377
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
A0A7S3U1W3_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U1W3_9SPIT)
HSP 1 Score: 138 bits (347), Expect = 5.630e-39
Identity = 68/136 (50.00%), Postives = 94/136 (69.12%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTPFCLG 408
LAL+Y LA L P+PVAIGHIFL G ++A +VTVTH +E+ +V QFR+TR+A T P +E++WGGMQYQLEHHLFPT+PRY+YR L P ++++A E G+EYR + E++ N ++ + H P G
Sbjct: 28 LALNYLWLACL-PVPVAIGHIFLAGLISAIIVTVTHQSEDMFDGLQHDWVLAQFRSTRNARTSNPFSEWLWGGMQYQLEHHLFPTMPRYRYRRLAPRLKQWAAEQGVEYREDSEAEVLLRNFRMLRDVAHEPAVTG 162
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
A0A6U1MJH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MJH9_9STRA)
HSP 1 Score: 144 bits (364), Expect = 1.180e-38
Identity = 75/148 (50.68%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYA------------AEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNIALVSPLVHTPFCLG 408
LA +Y L+ + G + LGG L AT+VTVTH AEEY + DD S+V+ QFRTTRDAI PV+EY+WGGMQYQLEHHLFP +PRYKY L P+V+++AE+ G++YRAT QW+II DNI + + P G
Sbjct: 300 LAANYAFFLYLLGPAMFAGMVTLGGLLIATIVTVTHQAEEYLPNNDGIGLDGQESSDDPSFVDMQFRTTRDAICRDPVSEYIWGGMQYQLEHHLFPIMPRYKYSKLAPVVKEWAEKVGLDYRATDQWQIISDNINYLKKVGEAPALKG 447
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Match:
A0A7S4DB60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB60_HETAK)
HSP 1 Score: 137 bits (344), Expect = 4.530e-38
Identity = 65/122 (53.28%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 1 LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYVETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRKFAEENGIEYRATPQWEIIKDNI 366
+A HY + AL + +GG + AT+VT TH +EEY E + S+V+ QF T+RDA+ P++EYVWGGMQYQLEHHLFPT+PRYKY LVP+V+++A E GIEYR ++EI+K NI
Sbjct: 52 IAAHYAIFLALFGPGWLFAQVAIGGAMLATIVTCTHQSEEYYEEYEDSFVDNQFSTSRDAVCSNPISEYVWGGMQYQLEHHLFPTMPRYKYPALVPVVQQWAAEQGIEYRTAGEFEIVKRNI 173
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10647.459.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 1.18e-80 / Id = 91.18 Expect = 1.66e-59 / Id = 64.83 Expect = 3.29e-59 / Id = 64.83 Expect = 1.77e-48 / Id = 62.12 Expect = 1.04e-42 / Id = 52.27 Expect = 7.57e-41 / Id = 50.76 Expect = 1.20e-40 / Id = 52.27 Expect = 5.63e-39 / Id = 50.00 Expect = 1.18e-38 / Id = 50.68 Expect = 4.53e-38 / Id = 53.28 Sequence D7FSV5_ECTSI A0A6H5JY43_9PHAE D7G2Y4_ECTSI A0A836CAU7_9STRA A0A7S4PM16_GUITH A0A7S0LKA8_9EUKA L1IL22_GUITC A0A7S3U1W3_9SPIT A0A6U1MJH9_9STRA A0A7S4DB60_HETAK
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0
Stop 1
Cds size 414
Model size 414
Exons 2
Hectar predicted targeting category signal peptide
BRITE ko00000,ko01000
Best eggNOG OG NA|NA|NA
Best tax level Eukaryota
COG Functional cat. I
EC 1.14.19.38,1.14.19.47
EggNOG OGs COG3239@1,KOG4232@2759
EggNOG free text desc. unsaturated fatty acid biosynthetic process
GOs GO:0000003,GO:0001505,GO:0001820,GO:0002682,GO:0003008,GO:0003012,GO:0003674,GO:0003824,GO:0004768,GO:0005575,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006837,GO:0006936,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007271,GO:0007275,GO:0007588,GO:0007610,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009914,GO:0009987,GO:0010817,GO:0014055,GO:0015695,GO:0015696,GO:0015844,GO:0015850,GO:0015870,GO:0015893,GO:0016020,GO:0016021,GO:0016053,GO:0016192,GO:0016197,GO:0016215,GO:0016491,GO:0016705,GO:0016717,GO:0018991,GO:0019098,GO:0019752,GO:0022414,GO:0023052,GO:0023061,GO:0030421,GO:0031224,GO:0031347,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032940,GO:0033036,GO:0033559,GO:0035264,GO:0040002,GO:0040007,GO:0040011,GO:0042221,GO:0042335,GO:0042493,GO:0042755,GO:0043050,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044425,GO:0045088,GO:0046394,GO:0046879,GO:0046903,GO:0046907,GO:0048583,GO:0048589,GO:0048609,GO:0048856,GO:0050776,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055114,GO:0061526,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0072330,GO:0080134,GO:0098916,GO:0099536,GO:0099537,GO:0099643,GO:1901374,GO:1901576
KEGG ko ko:K21737
Seed eggNOG ortholog 2880.D7FSV5
Seed ortholog evalue 1.5e-65
Seed ortholog score 255.4
Taxonomic scope Eukaryota
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10647.459.1
>prot_E-siliculosus-1a_F_contig10647.459.1 ID=prot_E-siliculosus-1a_F_contig10647.459.1|Name=mRNA_E-siliculosus-1a_F_contig10647.459.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=138bp
LALHYCLLAALVPLPVAIGHIFLGGWLTATLVTVTHTAEEYAAEDDSSYV ETQFRTTRDAITDGPVAEYVWGGMQYQLEHHLFPTIPRYKYRHLVPLVRK FAEENGIEYRATPQWEIIKDNIALVSPLVHTPFCLGR* back to top mRNA from alignment at E-siliculosus-1a_F_contig10647:336..1322+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10647.459.1 ID=mRNA_E-siliculosus-1a_F_contig10647.459.1|Name=mRNA_E-siliculosus-1a_F_contig10647.459.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=987bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10647:336..1322+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)CTAGCCCTGCACTACTGCTTGCTCGCGGCCCTCGTGCCCCTTCCGGTGGC
AATCGGCCACATCTTCCTCGGGGGGTGGCTTACGGCTACCCTCGTGACGG
TGACACACACGGCGGAGGAGTACGCCGCCGAGGACGACTCGTCGTACGTG
GAGACGCAGTTCAGGACAACTAGGGACGCCATCACCGACGGACCCGTCGC
GGA GTGAGTTTCGCCTTTTTCTTTTTTTTCCTGCTCCCGTTGTCTCGTTC
TTAATTTGTTCCTGGTTCCGTTCTCGAGTCATTACTTTTTTTTATCTGCT
TCCGTTGCCTTGATTTTTGTTGCAGGGTCGGTTCTTGATTTTTTTTTTTT
TTCCCGAAGTCACGGAAACAAGCTCCTCTCCTGCGCCCCGTCTCTGTGCT
GGTTTTCTTTCAAATATTTTTTATTTGATTTGTCATGAGGGACGCCCTTT
CGCCCAGACGACAAGTATGGATGACGGAAGCAGTCGCGATTTTTTTCATC
AGGATCTCTCTGCCAGCAGTATGTACAGCGGACAGCCCCGTCCACGTCTT
TCGTGCCATCCATTTTTTGTTTTCGTCATTCTTCACGGACGTACATGTTC
CTGACCTCTATCCTTCGGTTGCCCCCCTCTCTCAGTCCCCGACTTAGTTG
TGAACACCGGGAGTCATTACCTAAATGTTTGTCCCTTGGACTGACGAAAC
AATCCCTCCTCCCCTTCTCCGGACTTGACTGACTTTTGTGGGTGACTATA
ACAATCGTGCCATGTTTTGCTACCAGATACGTGTGGGGCGGCATGCAGTA
CCAGCTGGAGCACCACCTGTTCCCTACCATCCCCCGGTACAAATACCGCC
ACCTCGTGCCCCTGGTGAGGAAGTTCGCCGAGGAGAACGGTATCGAGTAC
AGGGCCACCCCCCAGTGGGAGATCATCAAGGACAACATTGCTCTGGTAAG
TCCGTTGGTTCACACGCCTTTTTGTCTTGGTCGGTGA back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10647:336..1322+
>mRNA_E-siliculosus-1a_F_contig10647.459.1 ID=mRNA_E-siliculosus-1a_F_contig10647.459.1|Name=mRNA_E-siliculosus-1a_F_contig10647.459.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=828bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10647:336..1322+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) CTAGCCCTGCACTACTGCTTGCTCGCGGCCCTCGTGCCCCTTCCGGTGGC AATCGGCCACATCTTCCTCGGGGGGTGGCTTACGGCTACCCTCGTGACGG TGACACACACGGCGGAGGAGTACGCCGCCGAGGACGACTCGTCGTACGTG GAGACGCAGTTCAGGACAACTAGGGACGCCATCACCGACGGACCCGTCGC GGACTAGCCCTGCACTACTGCTTGCTCGCGGCCCTCGTGCCCCTTCCGGT GGCAATCGGCCACATCTTCCTCGGGGGGTGGCTTACGGCTACCCTCGTGA CGGTGACACACACGGCGGAGGAGTACGCCGCCGAGGACGACTCGTCGTAC GTGGAGACGCAGTTCAGGACAACTAGGGACGCCATCACCGACGGACCCGT CGCGGAATACGTGTGGGGCGGCATGCAGTACCAGCTGGAGCACCACCTGT TCCCTACCATCCCCCGGTACAAATACCGCCACCTCGTGCCCCTGGTGAGG AAGTTCGCCGAGGAGAACGGTATCGAGTACAGGGCCACCCCCCAGTGGGA GATCATCAAGGACAACATTGCTCTGGTAAGTCCGTTGGTTCACACGCCTT TTTGTCTTGGTCGGTGAATACGTGTGGGGCGGCATGCAGTACCAGCTGGA GCACCACCTGTTCCCTACCATCCCCCGGTACAAATACCGCCACCTCGTGC CCCTGGTGAGGAAGTTCGCCGAGGAGAACGGTATCGAGTACAGGGCCACC CCCCAGTGGGAGATCATCAAGGACAACATTGCTCTGGTAAGTCCGTTGGT TCACACGCCTTTTTGTCTTGGTCGGTGA back to top