prot_E-siliculosus-1a_F_contig1064.457.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1064.457.1
Unique Nameprot_E-siliculosus-1a_F_contig1064.457.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length66
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1064.457.1 vs. uniprot
Match: A0A7S3Y2R5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2R5_HETAK)

HSP 1 Score: 47.4 bits (111), Expect = 3.670e-5
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 0 
Query:    1 MYGSQTGNAQSIAEGVHDGCQKRGLESTLLKCDAWKK 37
            MYGSQTGNA+SIA+ +H     RG   T+ + DAWKK
Sbjct:   16 MYGSQTGNAESIAKDLHASLLARGFACTVTEMDAWKK 52
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1064.457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3Y2R5_HETAK3.670e-556.76Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029039Flavoprotein-like superfamilyGENE3D3.40.50.360coord: 1..64
e-value: 8.5E-8
score: 34.0
IPR029039Flavoprotein-like superfamilySUPERFAMILY52218Flavoproteinscoord: 1..53
IPR008254Flavodoxin/nitric oxide synthasePROSITEPS50902FLAVODOXIN_LIKEcoord: 1..65
score: 8.769

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1064contigE-siliculosus-1a_F_contig1064:34910..36253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1064.457.1mRNA_E-siliculosus-1a_F_contig1064.457.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1064 34910..36253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1064.457.1 ID=prot_E-siliculosus-1a_F_contig1064.457.1|Name=mRNA_E-siliculosus-1a_F_contig1064.457.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=66bp
MYGSQTGNAQSIAEGVHDGCQKRGLESTLLKCDAWKKVTIQSVCLSIHSL
ATTATNKHVEEGRWQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008254Flavodoxin/NO_synth
IPR029039Flavoprotein-like_sf