prot_E-siliculosus-1a_F_contig1064.454.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1064.454.1
Unique Nameprot_E-siliculosus-1a_F_contig1064.454.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length398
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1064.454.1 vs. uniprot
Match: A0A6H5KHK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK1_9PHAE)

HSP 1 Score: 648 bits (1671), Expect = 1.370e-231
Identity = 322/358 (89.94%), Postives = 329/358 (91.90%), Query Frame = 0 
Query:    1 MRGSWRAGLSSLGAAMILSKVGLVSGHSQLVMEQTFYMETSSCEGVSCRKEIIGANETLGVGAVEECSHNTTYWHEDLDQRLPAPNGKQLFELVYSCRKHGPDGEEVVLTSLEECGMVAEPCVDAGTNPSISEVTYQVAFEFEAQSYDVSVDVKLYFNYLKAGDKFHAKRSENAVRCLLSETCHRRRVCLCEPGEWSFPAELRDSIGDGWNAGGTNLFDHFRLESRSELTAEVSAMMSSDEANNAPATXXXXXXRRTSYLNTMLGGSARTVPLCLSDGEYLFSTQFHTPGPGDSSHAFDVAGRLFSESTWNFCGHEGTLADYTHVRVAGGLCTPIADWGKTAAPSATPVLGATEFPTP 358
            MRGSWRAGLSSLGAAM+LSKVGLV+GHSQLVMEQTFYMETSSCEGVSCRKEIIGANETLGVGAVEECSHNT YWHEDL+    APNGKQLFELVYSCRKHGPDGEEVVLTSLEECGMVAEPCVDAGTNP ISEVTYQVAFEFEAQ YDVSVDVKL+FNYLKAGDKFHAKRSENAVRCLLSETCHRRR      GEWSFPAELRDS+GDGWNAGG NLFDHFRLESRSELTAEVSAMMSSDEAN A A       RRTSYLNTMLGGSARTVPLCLSDGEYLFSTQFHTPGP DSSHAFDVAGRLFSESTW FCGH+GTLADYTHVRVAGGLCTPIA WG+TAAPSATP LGAT  PTP
Sbjct:    1 MRGSWRAGLSSLGAAMMLSKVGLVNGHSQLVMEQTFYMETSSCEGVSCRKEIIGANETLGVGAVEECSHNTAYWHEDLE----APNGKQLFELVYSCRKHGPDGEEVVLTSLEECGMVAEPCVDAGTNPGISEVTYQVAFEFEAQPYDVSVDVKLFFNYLKAGDKFHAKRSENAVRCLLSETCHRRRS-----GEWSFPAELRDSMGDGWNAGGINLFDHFRLESRSELTAEVSAMMSSDEANTAAAPSPAA--RRTSYLNTMLGGSARTVPLCLSDGEYLFSTQFHTPGPDDSSHAFDVAGRLFSESTWTFCGHKGTLADYTHVRVAGGLCTPIAGWGETAAPSATPFLGATLVPTP 347
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BLAST of mRNA_E-siliculosus-1a_F_contig1064.454.1 vs. uniprot
Match: D7G3N1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N1_ECTSI)

HSP 1 Score: 581 bits (1498), Expect = 4.690e-207
Identity = 289/315 (91.75%), Postives = 292/315 (92.70%), Query Frame = 0 
Query:   16 MILSKVGLVSGHSQLVMEQTFYMETSSCEGVSCRKEIIGANETLGVGAVEECSHNTTYWHEDLDQRLPAPNGKQLFELVYSCRKHGPDGEEVVLTSLEECGMVAEPCVDAGTNPSISEVTYQVAFEFEAQSYDVSVDVKLYFNYLKAGDKFHAKRSENAVRCLLSETCHRRRVCLCEPGEWSFPAELRDSIGDGWNAGGTNLFDHFRLESRSELTAEVSAMMSSDEANNAPATXXXXXXRRTSYLNTMLGGSARTVPLCLSDGEYLFSTQFHTPGPGDSSHAFDVAGRLFSESTWNFCGHEGTLADYTHVRVAGG 330
            M+L KV LVSGHSQLVMEQTFYMETSSCEGVSCRKEIIGANETLGVGAVEECSHNTTYWHEDLDQRLPAP GKQLFELVYSCRKHGPDGEEVVLTSLEECGMVAEPCVDAGTNP ISEVTYQVAFEFEAQSYDVSVDVKLYFNYLKAGDKFHAKRSENAVRCLLSETCHRR    CE GEW FPAELRDS+GDGWNAGG NLFDHFRLESRSELTAEVSAMMSSD        XXXXXXRRTSYLNTMLGGSARTVPLCLS+GEYLFSTQFHTPGPGD SHAFDVAGRLFSESTW FCGHEGTLADYTHVRV  G
Sbjct:    1 MMLRKVALVSGHSQLVMEQTFYMETSSCEGVSCRKEIIGANETLGVGAVEECSHNTTYWHEDLDQRLPAPTGKQLFELVYSCRKHGPDGEEVVLTSLEECGMVAEPCVDAGTNPGISEVTYQVAFEFEAQSYDVSVDVKLYFNYLKAGDKFHAKRSENAVRCLLSETCHRR----CESGEWGFPAELRDSMGDGWNAGGINLFDHFRLESRSELTAEVSAMMSSDXXXXXXXXXXXXXXRRTSYLNTMLGGSARTVPLCLSEGEYLFSTQFHTPGPGDPSHAFDVAGRLFSESTWTFCGHEGTLADYTHVRVNNG 311
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1064.454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHK1_9PHAE1.370e-23189.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3N1_ECTSI4.690e-20791.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..397
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.633

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1064contigE-siliculosus-1a_F_contig1064:11524..17536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1064.454.1mRNA_E-siliculosus-1a_F_contig1064.454.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1064 11524..17536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1064.454.1 ID=prot_E-siliculosus-1a_F_contig1064.454.1|Name=mRNA_E-siliculosus-1a_F_contig1064.454.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=398bp
MRGSWRAGLSSLGAAMILSKVGLVSGHSQLVMEQTFYMETSSCEGVSCRK
EIIGANETLGVGAVEECSHNTTYWHEDLDQRLPAPNGKQLFELVYSCRKH
GPDGEEVVLTSLEECGMVAEPCVDAGTNPSISEVTYQVAFEFEAQSYDVS
VDVKLYFNYLKAGDKFHAKRSENAVRCLLSETCHRRRVCLCEPGEWSFPA
ELRDSIGDGWNAGGTNLFDHFRLESRSELTAEVSAMMSSDEANNAPATAA
AAAARRTSYLNTMLGGSARTVPLCLSDGEYLFSTQFHTPGPGDSSHAFDV
AGRLFSESTWNFCGHEGTLADYTHVRVAGGLCTPIADWGKTAAPSATPVL
GATEFPTPAPGTGTGTGGEQRLVRRRRGRGRGGGRRRWRRRTESRRR*
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