prot_E-siliculosus-1a_F_contig1064.452.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1064.452.1
Unique Nameprot_E-siliculosus-1a_F_contig1064.452.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length285
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1064.452.1 vs. uniprot
Match: D7G3N3_ECTSI (Importin alpha-7 subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N3_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 7.500e-102
Identity = 272/290 (93.79%), Postives = 274/290 (94.48%), Query Frame = 0 
Query:    1 MVELEEGNALCKREAAWVFLNMCECSGDPGETIIPEIVGHGVIAAVCENLSSESDAGKASWEPTLLVMLSLLYTILDAGGLGSTLTLSEYTTLVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------QPGCNFKSEKNSPRQPLGTVQQQHLLATGSSSALSPPLSGGVAARGGKRAAAVGGCEVGDME 284
            MVELEEGNALCKREAAWVFLNMCECSGDPGETIIPEIVGHGVIAAVCENLSS+SDA       TLLVMLSLLYTILD GGLGSTLTLSEYTTLVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      QPGCNFKSEKNSPRQPLGTVQQQHLLATGSSSALSP +SGGVAARGGKRA AVGGCEVGDME
Sbjct:    1 MVELEEGNALCKREAAWVFLNMCECSGDPGETIIPEIVGHGVIAAVCENLSSDSDA------ETLLVMLSLLYTILDEGGLGSTLTLSEYTTLVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPGCNFKSEKNSPRQPLGTVQQQHLLATGSSSALSPRVSGGVAARGGKRADAVGGCEVGDME 284
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BLAST of mRNA_E-siliculosus-1a_F_contig1064.452.1 vs. uniprot
Match: A0A6H5KJL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL7_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 8.170e-94
Identity = 247/306 (80.72%), Postives = 253/306 (82.68%), Query Frame = 0 
Query:    1 MVELEEGNALCKREAAWVFLNMCECSGDPGETIIPEIVGHGVIAAVCENLSSESDAGKASWEP----------------------TLLVMLSLLYTILDAGGLGSTLTLSEYTTLVEEAQGFDKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPGCNFKSEKNSPRQPLGTVQQQHLLATGSSSALSPPLSGGVAARGGKRAAAVGGCEVGDME 284
            MVELEEGNALCKREAAWVFLNMCECSGDP  TIIPEIVGHGVIAAVCENLSS+SDAGKAS EP                      TLLVMLSLLYTILD GGLGSTLTLSEYTTLVEEAQGFDKI+ LANDHDDMEIYDKAMDIIQAFHDSQ+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  QPGCNFKSE  S RQPLGTV+QQHLLATGSSSAL+PPL+GGVAA G KR AAV GCEVGDME
Sbjct:   88 MVELEEGNALCKREAAWVFLNMCECSGDPRATIIPEIVGHGVIAAVCENLSSDSDAGKASREPVDASAKRLPCTPPSTPPRNPAETLLVMLSLLYTILDEGGLGSTLTLSEYTTLVEEAQGFDKIISLANDHDDMEIYDKAMDIIQAFHDSQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSEASPIASPTAEQEEEQQPGCNFKSETKSSRQPLGTVRQQHLLATGSSSALAPPLTGGVAAGGRKRTAAVRGCEVGDME 393
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1064.452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3N3_ECTSI7.500e-10293.79Importin alpha-7 subunit, putative n=1 Tax=Ectocar... [more]
A0A6H5KJL7_9PHAE8.170e-9480.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..136
e-value: 9.1E-16
score: 59.3
IPR032413Atypical Arm repeatPFAMPF16186Arm_3coord: 89..137
e-value: 6.1E-14
score: 51.3
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 4..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1064contigE-siliculosus-1a_F_contig1064:65..1876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1064.452.1mRNA_E-siliculosus-1a_F_contig1064.452.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1064 65..1876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1064.452.1 ID=prot_E-siliculosus-1a_F_contig1064.452.1|Name=mRNA_E-siliculosus-1a_F_contig1064.452.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=285bp
MVELEEGNALCKREAAWVFLNMCECSGDPGETIIPEIVGHGVIAAVCENL
SSESDAGKASWEPTLLVMLSLLYTILDAGGLGSTLTLSEYTTLVEEAQGF
DKIMGLANDHDDMEIYDKAMDIIQAFHDSQEDEDDDDDELVFGVAHATAA
AAAAAATRACAVSSNHDDSSDMMSDDSLSDDSFHRELAGAASGPITPPPA
AHRRPSEASPIAPPTAEQEEEQQPGCNFKSEKNSPRQPLGTVQQQHLLAT
GSSSALSPPLSGGVAARGGKRAAAVGGCEVGDME*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR032413Arm_3
IPR011989ARM-like