mRNA_E-siliculosus-1a_F_contig10637.451.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10637.451.1
Unique NamemRNA_E-siliculosus-1a_F_contig10637.451.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: PSBA_ECTSI (Photosystem II protein D1 n=1129 Tax=Eukaryota TaxID=2759 RepID=PSBA_ECTSI)

HSP 1 Score: 436 bits (1122), Expect = 1.420e-152
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 660
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILM PFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG
Sbjct:  141 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMRPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A1N7TJI8_9PHAE (Photosystem II protein D1 n=412 Tax=Eukaryota TaxID=2759 RepID=A0A1N7TJI8_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 1.170e-151
Identity = 213/220 (96.82%), Postives = 219/220 (99.55%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 660
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPV+ IWLT+LG+STMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNE+LPVA+SAPS+VG
Sbjct:  141 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVIAIWLTSLGISTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEVLPVAVSAPSIVG 360
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: PSBA_PHATC (Photosystem II protein D1 n=590 Tax=root TaxID=1 RepID=PSBA_PHATC)

HSP 1 Score: 421 bits (1082), Expect = 1.740e-146
Identity = 207/220 (94.09%), Postives = 215/220 (97.73%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 660
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+GVSTMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP+V G
Sbjct:  141 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGVSTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A023JEK8_9STRA (Photosystem II protein D1 n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A023JEK8_9STRA)

HSP 1 Score: 415 bits (1066), Expect = 4.720e-144
Identity = 203/220 (92.27%), Postives = 215/220 (97.73%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 660
            PWIFVAFSAPVAAA+AVF+VYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES ++GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTA+G+STMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP+V G
Sbjct:  141 PWIFVAFSAPVAAAAAVFVVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESPDFGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A7S2RD40_9STRA (Photosystem II protein D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD40_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 8.300e-143
Identity = 200/220 (90.91%), Postives = 213/220 (96.82%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 660
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET++ ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPV+GIW+TA+G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRADLG+EVMHERNAHNFPLDLA+ E+ PVA+SAP+V G
Sbjct:  153 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTDSESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWITAMGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRADLGIEVMHERNAHNFPLDLAAGEVFPVAVSAPAVNG 372
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: PSBA_CYAM1 (Photosystem II protein D1 n=18 Tax=Eukaryota TaxID=2759 RepID=PSBA_CYAM1)

HSP 1 Score: 408 bits (1049), Expect = 1.820e-141
Identity = 198/218 (90.83%), Postives = 213/218 (97.71%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 654
            PWI VAFSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGG+LFSAMHGSLVTSSLIRETSE ES+N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPVVGIWLTA+G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRA+LG+EVMHERNAHNFPLDLASN ++PVA++APSV
Sbjct:  141 PWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGALFSAMHGSLVTSSLIRETSENESLNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVVGIWLTAIGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRANLGIEVMHERNAHNFPLDLASNSVVPVALTAPSV 358
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A451FLR3_9STRA (Photosystem II protein D1 n=179 Tax=Eukaryota TaxID=2759 RepID=A0A451FLR3_9STRA)

HSP 1 Score: 408 bits (1048), Expect = 2.580e-141
Identity = 199/218 (91.28%), Postives = 211/218 (96.79%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 654
            PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET +  S NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLTALG+STMAFNLNGFNFNQSVVDS+GRVINTWADI+NRA+LG+EVMHERNAHNFPLDLA + +LPVA++AP+V
Sbjct:  141 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETEDGVSANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAIWPVVGIWLTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLAVSNVLPVALNAPAV 358
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A0D6KAE8_9CYAN (RnfA-Nqr electron transport subunit (Fragment) n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A0D6KAE8_9CYAN)

HSP 1 Score: 403 bits (1035), Expect = 3.470e-141
Identity = 194/218 (88.99%), Postives = 210/218 (96.33%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSV 654
            PWI +AFSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSL+RET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TALG+STMAFNLNGFNFNQSV+DS+GRV+NTWADIINRA+LGMEVMHERNAHNFPLDLA+ E  PVA++AP++
Sbjct:   18 PWICLAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTENESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVIDSQGRVVNTWADIINRANLGMEVMHERNAHNFPLDLAAGEQAPVALTAPAI 235
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A448Z6F3_9STRA (32 kDa thylakoid membrane protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z6F3_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 1.020e-140
Identity = 200/219 (91.32%), Postives = 210/219 (95.89%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVV 657
            PWIFVAFSAPVAAA+AVFL YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHP HMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPV+GIW TA+GVSTMAFNLNGFNFNQ+V+DSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLAS EILPVA+ AP++V
Sbjct:  201 PWIFVAFSAPVAAATAVFLTYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPLHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWCTAMGVSTMAFNLNGFNFNQAVIDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEILPVAMEAPAIV 419
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BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Match: A0A3C1RYZ8_9CYAN (Photosystem II q(B) protein (Fragment) n=1 Tax=Planktothrix sp. UBA8407 TaxID=2055758 RepID=A0A3C1RYZ8_9CYAN)

HSP 1 Score: 401 bits (1030), Expect = 1.510e-140
Identity = 192/220 (87.27%), Postives = 208/220 (94.55%), Query Frame = 1 
Query:    1 PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 660
            PWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSL+RET+EVES+NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHF L AWPV+GIW TALGVSTMAFNLNGFNFNQS++DS GRVINTWAD++NRA+LGMEVMHERNAHNFPLDLAS E  PVA+ AP + G
Sbjct:   12 PWICVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESLNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFLLGAWPVIGIWFTALGVSTMAFNLNGFNFNQSIIDSTGRVINTWADVLNRANLGMEVMHERNAHNFPLDLASGESAPVALVAPQING 231
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10637.451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PSBA_ECTSI1.420e-15299.55Photosystem II protein D1 n=1129 Tax=Eukaryota Tax... [more]
A0A1N7TJI8_9PHAE1.170e-15196.82Photosystem II protein D1 n=412 Tax=Eukaryota TaxI... [more]
PSBA_PHATC1.740e-14694.09Photosystem II protein D1 n=590 Tax=root TaxID=1 R... [more]
A0A023JEK8_9STRA4.720e-14492.27Photosystem II protein D1 n=4 Tax=Bacillariophyta ... [more]
A0A7S2RD40_9STRA8.300e-14390.91Photosystem II protein D1 n=1 Tax=Rhizochromulina ... [more]
PSBA_CYAM11.820e-14190.83Photosystem II protein D1 n=18 Tax=Eukaryota TaxID... [more]
A0A451FLR3_9STRA2.580e-14191.28Photosystem II protein D1 n=179 Tax=Eukaryota TaxI... [more]
A0A0D6KAE8_9CYAN3.470e-14188.99RnfA-Nqr electron transport subunit (Fragment) n=5... [more]
A0A448Z6F3_9STRA1.020e-14091.3232 kDa thylakoid membrane protein n=2 Tax=Pseudo-n... [more]
A0A3C1RYZ8_9CYAN1.510e-14087.27Photosystem II q(B) protein (Fragment) n=1 Tax=Pla... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10637contigE-siliculosus-1a_F_contig10637:1708..2370 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size663
Model size663
Exons1
Hectar predicted targeting categorysignal peptide
Best tax levelEukaryota
COG Functional cat.C
EC1.10.3.9
EggNOG OGs28IP8@1,2QR09@2759
EggNOG free text desc.electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
KEGG ModuleM00161
KEGG Pathwayko00195,ko01100,map00195,map01100
KEGG koko:K02703
Preferred namepsbA
Seed eggNOG ortholog2880.D1J6Z2
Seed ortholog evalue4.2e-121
Seed ortholog score440.7
Taxonomic scopeEukaryota
BRITEko00000,ko00001,ko00002,ko00194,ko01000
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927564.337129-CDS-E-siliculosus-1a_F_contig10637:1707..23701622927564.337129-CDS-E-siliculosus-1a_F_contig10637:1707..2370Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10637 1708..2370 -
1696318588.268529-CDS-E-siliculosus-1a_F_contig10637:1707..23701696318588.268529-CDS-E-siliculosus-1a_F_contig10637:1707..2370Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10637 1708..2370 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10637.451.1prot_E-siliculosus-1a_F_contig10637.451.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10637 1708..2370 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10637.451.1

>prot_E-siliculosus-1a_F_contig10637.451.1 ID=prot_E-siliculosus-1a_F_contig10637.451.1|Name=mRNA_E-siliculosus-1a_F_contig10637.451.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=221bp
PWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEH
NILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFG
QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGV
STMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFP
LDLASNEILPVAISAPSVVG*
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mRNA from alignment at E-siliculosus-1a_F_contig10637:1708..2370-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10637.451.1 ID=mRNA_E-siliculosus-1a_F_contig10637.451.1|Name=mRNA_E-siliculosus-1a_F_contig10637.451.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=663bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10637:1708..2370- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCTTGGATTTTCGTAGCATTCTCTGCTCCAGTAGCAGCAGCTTCTGCAGT
ATTCTTAGTTTACCCTATCGGTCAAGGTAGTTTCTCAGATGGTATGCCAT
TAGGTATTTCTGGTACATTTAACTTCATGATCGTTTTCCAAGCAGAACAT
AACATTTTAATGCACCCATTCCATATGGCTGGTGTTGCTGGTGTTTTTGG
TGGTTCATTATTCAGTGCTATGCATGGATCTTTAGTAACTTCAAGTCTTA
TTCGTGAAACAAGCGAAGTTGAATCTGTTAACTACGGTTACAAATTCGGT
CAAGAAGAAGAAACTTATAACATCGTAGCTGCACATGGTTACTTCGGACG
TTTAATTTTCCAATATGCTAGTTTTAACAACTCTCGAGCTTTACATTTCT
TCCTTGCAGCATGGCCTGTAGTTGGTATTTGGTTAACAGCTTTAGGTGTA
AGTACTATGGCATTCAACTTAAACGGTTTCAACTTTAACCAATCTGTTGT
TGATAGTGAAGGTCGTGTTATTAACACATGGGCTGATATTATTAACCGTG
CAGATTTAGGTATGGAAGTAATGCACGAACGTAACGCTCATAATTTCCCA
TTAGATTTAGCATCTAACGAAATTCTTCCAGTTGCGATTTCTGCACCTTC
TGTTGTAGGTTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10637:1708..2370-

>mRNA_E-siliculosus-1a_F_contig10637.451.1 ID=mRNA_E-siliculosus-1a_F_contig10637.451.1|Name=mRNA_E-siliculosus-1a_F_contig10637.451.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1326bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10637:1708..2370- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CCTTGGATTTTCGTAGCATTCTCTGCTCCAGTAGCAGCAGCTTCTGCAGT
ATTCTTAGTTTACCCTATCGGTCAAGGTAGTTTCTCAGATGGTATGCCAT
TAGGTATTTCTGGTACATTTAACTTCATGATCGTTTTCCAAGCAGAACAT
AACATTTTAATGCACCCATTCCATATGGCTGGTGTTGCTGGTGTTTTTGG
TGGTTCATTATTCAGTGCTATGCATGGATCTTTAGTAACTTCAAGTCTTA
TTCGTGAAACAAGCGAAGTTGAATCTGTTAACTACGGTTACAAATTCGGT
CAAGAAGAAGAAACTTATAACATCGTAGCTGCACATGGTTACTTCGGACG
TTTAATTTTCCAATATGCTAGTTTTAACAACTCTCGAGCTTTACATTTCT
TCCTTGCAGCATGGCCTGTAGTTGGTATTTGGTTAACAGCTTTAGGTGTA
AGTACTATGGCATTCAACTTAAACGGTTTCAACTTTAACCAATCTGTTGT
TGATAGTGAAGGTCGTGTTATTAACACATGGGCTGATATTATTAACCGTG
CAGATTTAGGTATGGAAGTAATGCACGAACGTAACGCTCATAATTTCCCA
TTAGATTTAGCATCTAACGAAATTCTTCCAGTTGCGATTTCTGCACCTTC
TGTTGTAGGTTAACCTTGGATTTTCGTAGCATTCTCTGCTCCAGTAGCAG
CAGCTTCTGCAGTATTCTTAGTTTACCCTATCGGTCAAGGTAGTTTCTCA
GATGGTATGCCATTAGGTATTTCTGGTACATTTAACTTCATGATCGTTTT
CCAAGCAGAACATAACATTTTAATGCACCCATTCCATATGGCTGGTGTTG
CTGGTGTTTTTGGTGGTTCATTATTCAGTGCTATGCATGGATCTTTAGTA
ACTTCAAGTCTTATTCGTGAAACAAGCGAAGTTGAATCTGTTAACTACGG
TTACAAATTCGGTCAAGAAGAAGAAACTTATAACATCGTAGCTGCACATG
GTTACTTCGGACGTTTAATTTTCCAATATGCTAGTTTTAACAACTCTCGA
GCTTTACATTTCTTCCTTGCAGCATGGCCTGTAGTTGGTATTTGGTTAAC
AGCTTTAGGTGTAAGTACTATGGCATTCAACTTAAACGGTTTCAACTTTA
ACCAATCTGTTGTTGATAGTGAAGGTCGTGTTATTAACACATGGGCTGAT
ATTATTAACCGTGCAGATTTAGGTATGGAAGTAATGCACGAACGTAACGC
TCATAATTTCCCATTAGATTTAGCATCTAACGAAATTCTTCCAGTTGCGA
TTTCTGCACCTTCTGTTGTAGGTTAA
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