Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI)
HSP 1 Score: 243 bits (619), Expect = 5.560e-78
Identity = 125/142 (88.03%), Postives = 126/142 (88.73%), Query Frame = 1
Query: 1 MSASKGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLGNFED 426
MSASKGDRSRVDG EIEIFKLV + QWLRTPLEHAAAKGNLDLFTRLMDAGAGGEP WRGWGC RTLLGAAACGTKSDKMI ALLEAG TDDVNAVFGTE ESALHVSAARGAEEASKALMAAGADPDLGNFED
Sbjct: 1 MSASKGDRSRVDGFEIEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVNAVFGTERESALHVSAARGAEEASKALMAAGADPDLGNFED 142
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI)
HSP 1 Score: 197 bits (501), Expect = 8.110e-58
Identity = 104/143 (72.73%), Postives = 115/143 (80.42%), Query Frame = 1
Query: 1 MSASKG--DRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLGNFE 423
MSAS+ DRSRVDG EIEIFKLV + QWLRTPLEHAAAKGNLDLFTRL+DAGAGGEP W+GWG R RTLLGAAACG KSD M++ALLEAG T+ VN FG ESALHV+ ARGAE+ASKALM AGADP+LGN +
Sbjct: 1 MSASEREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVD 143
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI)
HSP 1 Score: 175 bits (443), Expect = 4.070e-52
Identity = 93/137 (67.88%), Postives = 102/137 (74.45%), Query Frame = 1
Query: 13 KGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLGNFE 423
KG RSR+DG EIEIFKLV + QW R PLEHA A+GNLDLFTRLMDAGA GE WRG C RTLLGAAACG SDKM+RALLEAGA DVN FG +ES LHVSAARGAE + ALM AGADP+L ++E
Sbjct: 7 KGHRSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRG--CHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRDWE 141
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)
HSP 1 Score: 169 bits (429), Expect = 2.260e-46
Identity = 96/137 (70.07%), Postives = 107/137 (78.10%), Query Frame = 1
Query: 4 SASKGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGA-GGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL 411
S + RSR+DG EIEIFKLV + QWL+ PLEHAAA+GNLDLFTRLMDAG GGE WRG C RTLLGAAA G KSDK++RALLEAGA DDVN +FG E +SALHV+AARGAEEASKALM AGADP+L
Sbjct: 6 SKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRG--CNGRTLLGAAAWG-KSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNL 139
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)
HSP 1 Score: 162 bits (409), Expect = 3.320e-43
Identity = 88/136 (64.71%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 4 SASKGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL 411
S DR+RVDG E+EIFKLV + +WLR PLEHAAA GNL LFTRLMDAGA E WRG C RTLLGAAAC +K+ K++RALL AGA DVN +FG + ESALH++AARGAEEASKALM AGA+P+L
Sbjct: 7 SQQSQDRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRG--CDGRTLLGAAAC-SKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPNL 139
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)
HSP 1 Score: 160 bits (404), Expect = 1.090e-42
Identity = 87/131 (66.41%), Postives = 101/131 (77.10%), Query Frame = 1
Query: 19 DRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL 411
DRSR+ G EIEIFKL+ + +WLR PLEHAAA+GNLDLFTRLMDAGA E WRG C RTLLGAAA G +S+KMIR LL AGATDDVN +FG E ESALHV+AARGA++ +ALM AGADP++
Sbjct: 10 DRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRG--CHGRTLLGAAALG-RSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNV 137
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE)
HSP 1 Score: 140 bits (352), Expect = 1.840e-36
Identity = 83/143 (58.04%), Postives = 99/143 (69.23%), Query Frame = 1
Query: 1 MSASKG-DRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDLGNFED 426
MS SK DRSRVDG E++IFKLV +WL PL HAAAKG LDLFTRL++AGA G WRG C RTLLG AA + ++M+RA LEAGATDDVN FG +SAL V+AARGAE + ALM AGADP+ +++D
Sbjct: 1 MSGSKREDRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRG--CHGRTLLGEAA-RSDGNQMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDD 140
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI)
HSP 1 Score: 138 bits (347), Expect = 3.480e-34
Identity = 74/127 (58.27%), Postives = 88/127 (69.29%), Query Frame = 1
Query: 31 VDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL 411
+DGLE+EIFKLV + +WLR PLEHAAA+GN+DLFTRLMDAGA G WRG C RTLLGAAA G + + R L E GAT+DVN FG ESALHV+A R + S+ L+ AGADP+L
Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRG--CHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNL 189
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)
HSP 1 Score: 137 bits (346), Expect = 1.270e-33
Identity = 74/117 (63.25%), Postives = 86/117 (73.50%), Query Frame = 1
Query: 7 ASKGDRSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAAR 357
+ + DRS +DG E+EI +LV +G QWLR PLEHAAAKGNLDLFTRLMDAG+ GEP WRG C RTLLGA A G +S+KM+RALLEAG T D N F E +SALHV+AAR
Sbjct: 6 SKREDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRG--CNGRTLLGATAYG-ESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAAR 119
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Match:
A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)
HSP 1 Score: 136 bits (342), Expect = 3.930e-33
Identity = 79/131 (60.31%), Postives = 91/131 (69.47%), Query Frame = 1
Query: 1 MSASKGD---RSRVDGLEIEIFKLVNQGGGESGGVQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPDWRGWGCR*RTLLGAAACGTKSDKMIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKAL 384
MSASK RS +D EIEIFKLV + +WLR PLEHAAA+GNLD FTRLMDAGA E RG C RTLLGA AC +S+KM+R LL GATDDV +FG EHES LHVSAARGAE++ + +
Sbjct: 501 MSASKRQEEGRSCLDCFEIEIFKLVQKEATSEQWKEWLRAPLEHAAAEGNLDFFTRLMDAGANVEAGRRG--CHGRTLLGATACD-RSEKMVRTLLTTGATDDVAVLFGVEHESPLHVSAARGAEDSCRVI 628
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1063.447.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 5.56e-78 / Id = 88.03 Expect = 8.11e-58 / Id = 72.73 Expect = 4.07e-52 / Id = 67.88 Expect = 2.26e-46 / Id = 70.07 Expect = 3.32e-43 / Id = 64.71 Expect = 1.09e-42 / Id = 66.41 Expect = 1.84e-36 / Id = 58.04 Expect = 3.48e-34 / Id = 58.27 Expect = 1.27e-33 / Id = 63.25 Expect = 3.93e-33 / Id = 60.31 Sequence D8LQE9_ECTSI D7FZ92_ECTSI D8LQE2_ECTSI D8LB27_ECTSI D8LD22_ECTSI D8LQN0_ECTSI A0A6H5KQY9_9PHAE D7G692_ECTSI A0A6H5JHY5_9PHAE A0A6H5L7E1_9PHAE
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1
Stop 0
Cds size 420
Model size 682
Exons 1
Hectar predicted targeting category other localisation
BRITE ko00000,ko04131
Best eggNOG OG NA|NA|NA
Best tax level Eukaryota
COG Functional cat. G
EggNOG OGs COG0666@1,KOG4177@2759
EggNOG free text desc. response to abiotic stimulus
GOs GO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
KEGG ko ko:K21440
Seed eggNOG ortholog 2880.D8LQE9
Seed ortholog evalue 4.2e-18
Seed ortholog score 97.8
Taxonomic scope Eukaryota
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927563.5512764-CDS-E-siliculosus-1a_F_contig1063:27672..28092 1622927563.5512764-CDS-E-siliculosus-1a_F_contig1063:27672..28092 Ectocarpus siliculosus Ec863f_EcPH12_90f female CDS E-siliculosus-1a_F_contig1063 27673..28092 -
1696318587.9297042-CDS-E-siliculosus-1a_F_contig1063:27672..28092 1696318587.9297042-CDS-E-siliculosus-1a_F_contig1063:27672..28092 Ectocarpus siliculosus Ec863f_EcPH12_90f female CDS E-siliculosus-1a_F_contig1063 27673..28092 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927563.563555-UTR-E-siliculosus-1a_F_contig1063:28092..28353 1622927563.563555-UTR-E-siliculosus-1a_F_contig1063:28092..28353 Ectocarpus siliculosus Ec863f_EcPH12_90f female UTR E-siliculosus-1a_F_contig1063 28093..28353 -
1696318587.9467175-UTR-E-siliculosus-1a_F_contig1063:28092..28353 1696318587.9467175-UTR-E-siliculosus-1a_F_contig1063:28092..28353 Ectocarpus siliculosus Ec863f_EcPH12_90f female UTR E-siliculosus-1a_F_contig1063 28093..28353 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1063.447.1
>prot_E-siliculosus-1a_F_contig1063.447.1 ID=prot_E-siliculosus-1a_F_contig1063.447.1|Name=mRNA_E-siliculosus-1a_F_contig1063.447.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=140bp
MIRALLEAGATDDVNAVFGTEHESALHVSAARGAEEASKALMAAGADPDL GNFEDESPLHLAAETEHDRVVRVLLEQRANVDATSDFQVTPLHLAAVKGH TLCVSELLMGGANKDVFDLQGETPLLKAVRNNHLGVVEKL back to top mRNA from alignment at E-siliculosus-1a_F_contig1063:27673..28353-
Legend: UTR CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1063.447.1 ID=mRNA_E-siliculosus-1a_F_contig1063.447.1|Name=mRNA_E-siliculosus-1a_F_contig1063.447.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=681bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1063:27673..28353- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)ATGTCCGCTTCGAAAGGAGACCGCTCACGTGTGGACGGCTTGGAGATCGA
GATCTTCAAACTCGTCAATCAAGGAGGAGGCGAGTCCGGAGGAGTGCAGT
GGCTTCGAACACCTCTGGAGCATGCCGCGGCCAAAGGAAACTTGGATCTC
TTCACACGGCTGATGGACGCTGGTGCCGGCGGAGAACCAGATTGGCGGGG
TTGGGGTTGCCGTTAACGGACGCTGCTGGGTGCTGCTGCTTGCGGCACCA
AAAGCGACAAG ATGATCCGGGCTTTGCTCGAGGCTGGGGCGACGGATGAT
GTAAATGCCGTCTTCGGGACTGAACACGAGTCCGCTCTCCACGTTTCGGC
AGCACGCGGAGCAGAGGAGGCCTCCAAGGCGCTCATGGCCGCCGGGGCAG
ACCCGGATCTGGGTAATTTTGAGGACGAGAGTCCGCTCCACCTCGCTGCC
GAAACCGAGCACGACCGAGTTGTACGTGTTCTTTTGGAACAACGGGCCAA
CGTAGACGCGACGAGTGATTTCCAGGTGACTCCTCTCCACCTCGCTGCTG
TCAAGGGCCATACGCTGTGCGTCTCTGAGCTTTTGATGGGCGGTGCAAAC
AAGGACGTTTTCGATCTTCAAGGTGAAACGCCACTGTTAAAGGCGGTCAG
AAACAACCATCTCGGGGTTGTCGAAAAGCTG back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1063:27673..28353-
>mRNA_E-siliculosus-1a_F_contig1063.447.1 ID=mRNA_E-siliculosus-1a_F_contig1063.447.1|Name=mRNA_E-siliculosus-1a_F_contig1063.447.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=840bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1063:27673..28353- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGATCCGGGCTTTGCTCGAGGCTGGGGCGACGGATGATGTAAATGCCGT CTTCGGGACTGAACACGAGTCCGCTCTCCACGTTTCGGCAGCACGCGGAG CAGAGGAGGCCTCCAAGGCGCTCATGGCCGCCGGGGCAGACCCGGATCTG GGTAATTTTGAGGACGAGAGTCCGCTCCACCTCGCTGCCGAAACCGAGCA CGACCGAGTTGTACGTGTTCTTTTGGAACAACGGGCCAACGTAGACGCGA CGAGTGATTTCCAGGTGACTCCTCTCCACCTCGCTGCTGTCAAGGGCCAT ACGCTGTGCGTCTCTGAGCTTTTGATGGGCGGTGCAAACAAGGACGTTTT CGATCTTCAAGGTGAAACGCCACTGTTAAAGGCGGTCAGAAACAACCATC TCGGGGTTGTCGAAAAGCTGATGATCCGGGCTTTGCTCGAGGCTGGGGCG ACGGATGATGTAAATGCCGTCTTCGGGACTGAACACGAGTCCGCTCTCCA CGTTTCGGCAGCACGCGGAGCAGAGGAGGCCTCCAAGGCGCTCATGGCCG CCGGGGCAGACCCGGATCTGGGTAATTTTGAGGACGAGAGTCCGCTCCAC CTCGCTGCCGAAACCGAGCACGACCGAGTTGTACGTGTTCTTTTGGAACA ACGGGCCAACGTAGACGCGACGAGTGATTTCCAGGTGACTCCTCTCCACC TCGCTGCTGTCAAGGGCCATACGCTGTGCGTCTCTGAGCTTTTGATGGGC GGTGCAAACAAGGACGTTTTCGATCTTCAAGGTGAAACGCCACTGTTAAA GGCGGTCAGAAACAACCATCTCGGGGTTGTCGAAAAGCTG back to top