prot_E-siliculosus-1a_F_contig10623.444.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10623.444.1
Unique Nameprot_E-siliculosus-1a_F_contig10623.444.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length227
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: A0A6H5JGH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH1_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 1.420e-113
Identity = 207/276 (75.00%), Postives = 210/276 (76.09%), Query Frame = 0
Query:    1 SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRL----------------KSRSRIRGADRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPPQASPRSPGAHGGNSKGGGVXXXXXXXXXXXXG---------------------------------LGLTMFDRVLRDLGHGVCRMLNVQYRMNRDICDWAS 227
            +R   +VLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRL                KSRSRIRGADRKGARME      EARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPP+A PRSPGAHGGNSK GG XXXXXXX     G                                 LGLTMFDRVLRDLGHGVCRMLNVQYRMNRDICDWAS
Sbjct:  226 ARLLPQVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLYGEPGTGGGGRAGGVSKSRSRIRGADRKGARME------EARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPPRAPPRSPGAHGGNSKDGGXXXXXXXXVGTGWGXXXXXXXXXXXXXXXXXXXXXXXXXXGGGGGDGLGLTMFDRVLRDLGHGVCRMLNVQYRMNRDICDWAS 495          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: D7G8K5_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K5_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 3.200e-110
Identity = 207/246 (84.15%), Postives = 209/246 (84.96%), Query Frame = 0
Query:    1 SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRL-------------------KSRSRIRGADRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPPQASPRSPGAHGGNSKGGGVXXXXXXXXXXXXGLGLTMFDRVLRDLGHGVCRMLNVQYRMNRDICDWAS 227
            +R   +VLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRL                   KSRSRIRGADRKGARME      EARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPP A  RSPGAHGGNSK GG  XXXXXXXXXXX   LTMFDRVLRDLGHGVCRMLNVQYRMNRDICDWAS
Sbjct:  318 ARLLPQVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLHGESGTGXXXXXXXXXXVSKSRSRIRGADRKGARME------EARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPPHAPARSPGAHGGNSKDGGGVXXXXXXXXXXXXXXLTMFDRVLRDLGHGVCRMLNVQYRMNRDICDWAS 557          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: A0A835Z7I8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I8_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.570e-47
Identity = 112/239 (46.86%), Postives = 130/239 (54.39%), Query Frame = 0
Query:    7 VLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLKSRSRIRGA------------------DRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPPQASPRSPGAHGGNSKGGGVXXXXXXXXXXXXGLGLTMFDRVLRDLGHGVCRMLNVQYRMNRDICDWAS 227
            VL HS++ALV  HEGTA+V D R +   L  +L  R                        DR+  R +L  LRKE R RE  VV  VLR R VVLATCVGAAT  LR+E FDLVVIDEAAQALEAACW+P LKGRRLVLAGDHKQL PT+K                     A+ R+                         GLG+T+FDR+L   G G+ RML+VQYRM+ DIC WAS
Sbjct:  303 VLRHSLDALVRAHEGTALVADARAEAAALRAQLTGRXXXXXXXXXXXXXXXXXXXXXXXXDRRAVRAQLSALRKEIRVREEGVVASVLRKRRVVLATCVGAATRLLRDETFDLVVIDEAAQALEAACWVPALKGRRLVLAGDHKQLPPTIKC-------------------DAAARA-------------------------GLGVTLFDRLLAAHGDGIARMLDVQYRMHADICSWAS 497          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: A0A7S4IQC8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQC8_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.520e-38
Identity = 104/258 (40.31%), Postives = 133/258 (51.55%), Query Frame = 0
Query:    1 SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLKSRSRIRGADRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLRE---------------------EEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPPQASPRSPGAHGGNSKGGGVXXXXXXXXXXXXGLGLTMFDRVL----------RDLGHGVCRMLNVQYRMNRDICDWAS 227
            +R +  +L HS+E LV   +GT IV+DVR+++D+ + ++ S  + RG+DR+ AR E K LR E R RE  VV+EVL S +VVL TCVGA + +L +                       FDLVVIDEAAQALEA+CWIP L+G RLVLAGDHKQL PTV  R  E                                              GLG TMF+R++           D+   V RML VQYRM+ DI DW+S
Sbjct:   12 ARLRPAILPHSLEHLVRAADGTEIVRDVRRELDSYI-KVLSNPKARGSDRRIARREAKALRAEVRRREEGVVREVLGSANVVLCTCVGAGSSALNKLARTAAASPSSAYSGGPGNDSGHFDLVVIDEAAQALEASCWIPALRGSRLVLAGDHKQLPPTVMCRSGEV-------------------------------------------RNGLGRTMFERIMGLYGDDSSKGTDVEGRVSRMLRVQYRMHSDIADWSS 225          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: A0A448ZKX4_9STRA (R3H domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKX4_9STRA)

HSP 1 Score: 144 bits (364), Expect = 4.760e-36
Identity = 101/258 (39.15%), Postives = 137/258 (53.10%), Query Frame = 0
Query:    1 SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLL-----------GRLKS-RSRIRGA-DRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLR---------------EEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPPQASPRSPGAHGGNSKGGGVXXXXXXXXXXXXGLGLTMFDRVL---RDLGHGVCRMLNVQYRMNRDICDWAS 227
            +R +  +L+HS+EALV   +GT IV+DVR++++  L           GR  S R R + A D++ A  ++ TLR+E RARE KVV+E++RS  VVLAT VGA   +L                +  FDLVVIDEAAQALEA+CWIPIL+GR++VLAGDH QL PT+KS+                                                 GLG+T+F+R++   R     + RML +QYRM+  I DWAS
Sbjct:  332 ARIKPSILKHSLEALVQSSDGTEIVRDVRRELEACLRTVSRDRSGAGGRSGSGRPRKKDALDKRAAYRDIGTLRREVRAREEKVVRELIRSAHVVLATTVGADNRALNSITNPTETDGHTAGDDPGFDLVVIDEAAQALEASCWIPILRGRKVVLAGDHCQLPPTIKSKDPRVAA-------------------------------------------GLGVTLFERLMDLYRTREREISRMLKIQYRMHHQIADWAS 546          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: A0A7S4A8W4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8W4_9STRA)

HSP 1 Score: 144 bits (362), Expect = 8.920e-36
Identity = 98/262 (37.40%), Postives = 137/262 (52.29%), Query Frame = 0
Query:    1 SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLKSRSRIRGA-----------------DRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEE--------------FDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLPSEAVSVPPPQASPRSPGAHGGNSKGGGVXXXXXXXXXXXXGLGLTMFDRVLRDLGH----GVCRMLNVQYRMNRDICDWAS 227
            +R +  ++++S+EALV   +GT IV+DVRK++++ L  +   +  +G+                 DR+ A  E+K LRKE R RE KVVQE+++S  VVLAT VGA    L +                FDLV+IDEAAQALEA+CWIPIL+GR++VLAGDH QL PT+KS+                                                 GLG+T+F+R++ +L H     + RML +QYRM+ DI DWAS
Sbjct:  381 ARIKPSIVKYSLEALVQSSDGTEIVRDVRKELESYLKVMSRSNMAKGSKSSKPGSKGQQQRQAKFDRRAAYKEIKALRKEVRIREEKVVQELIQSAHVVLATTVGADNRVLNQITHPRDGNNKSGDQMGFDLVIIDEAAQALEASCWIPILRGRKVVLAGDHCQLPPTIKSKDHRV-------------------------------------------VAGLGVTLFERLM-NLYHTQEQAISRMLQIQYRMHHDIADWAS 598          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: W7TRN4_9STRA (Dna-binding protein smubp-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRN4_9STRA)

HSP 1 Score: 143 bits (361), Expect = 9.840e-36
Identity = 84/138 (60.87%), Postives = 103/138 (74.64%), Query Frame = 0
Query:   10 HSMEALVSRHEGTAIVKDVRKDIDTLLGRLKSRS--RIRGADRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEA 145
            +S+EALV   +GTA+V+D+R ++  L  R  S    ++R A R+  R E + LR+E R RE +VV EV+ SR+VVL TCVGA    LREE FDLVVIDEAAQALEAACWIPI +G R+VLAGDHKQLAPTVKS +AEA
Sbjct:  342 YSLEALVEGADGTALVRDIRAELAALERRGVSPKTPQLREARRQW-RSETRALRRELRTREARVVGEVVSSREVVLCTCVGAGARVLREERFDLVVIDEAAQALEAACWIPIQRGGRVVLAGDHKQLAPTVKSGRAEA 478          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: A0A7S2YDZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YDZ8_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.280e-35
Identity = 79/156 (50.64%), Postives = 108/156 (69.23%), Query Frame = 0
Query:    1 SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLKSRSRIRGADRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEE--------------FDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRK 142
            +R Q ++L +S+EALV   +GT IV++VR ++ + L ++ S  + RG +++ A  E+K+LR+E R RE KVV+E+L S  VVLATCVG+A   L+                 FDLVVIDEAAQALEAACWIP L+G+RLVLAGDHKQL PT++S +
Sbjct:   18 ARLQPEILPYSVEALVQAADGTEIVREVRSELQSFL-QILSNPKSRGNEKRIAYREMKSLRQEVRQREEKVVRELLTSAQVVLATCVGSANSILKSFTRGNGDNNNKKDGGFFDLVVIDEAAQALEAACWIPALRGKRLVLAGDHKQLPPTIQSNQ 172          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: A0A7S3MFF8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFF8_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.960e-35
Identity = 79/164 (48.17%), Postives = 109/164 (66.46%), Query Frame = 0
Query:    1 SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLKSRSRIRGAD-----------RKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFDLVVIDEAAQALEAACWIPILK-----GRRLVLAGDHKQLAPTVKSRKAEAGCL 148
            +R   K++++++++++S  EGT IVKDVRKDID L   +  + + R A+           ++  R E+++L KEAR RE  VV  +LR  D+VL+TCVGA +  L++ +FD+VVIDEAAQ LEAACWIPILK     G   VLAGDH QL PT+KS +AE G L
Sbjct:  126 ARISSKIMKYALDSIISTDEGTDIVKDVRKDIDELRQAMSKKGKRRPANQDEPGVSFAQVKRDQRSEMRSLMKEARQRERAVVVNILRKADIVLSTCVGAGSRLLKDLQFDMVVIDEAAQGLEAACWIPILKINSQTGGTCVLAGDHCQLPPTIKSPQAERGGL 289          
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Match: A0A7S3PU07_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PU07_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.260e-35
Identity = 80/146 (54.79%), Postives = 106/146 (72.60%), Query Frame = 0
Query:    1 SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLKSRSRIRGADRKGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLR--EEEFDLVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAE 144
            +R Q  +L+ S+E LV   +GT IV D+R ++ + L ++ S  + R  DR+ A  E++TLRKE R REGKV+Q V+ +  VV AT VGAA+  L   E+ FDLV+IDEAAQALEA+CWIPILKG+R+VLAGDH QL PT+KSR +E
Sbjct:  415 ARIQPAILKFSLEYLVQNADGTEIVSDIRSEMKSYL-QIASNPKTRSVDRRSAYREIRTLRKEIRQREGKVLQGVISNAQVVFATNVGAASSILNKCEKSFDLVIIDEAAQALEASCWIPILKGKRVVLAGDHCQLPPTIKSRHSE 559          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10623.444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGH1_9PHAE1.420e-11375.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8K5_ECTSI3.200e-11084.15R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z7I8_9STRA3.570e-4746.86P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4IQC8_9STRA1.520e-3840.31Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A448ZKX4_9STRA4.760e-3639.15R3H domain-containing protein n=1 Tax=Pseudo-nitzs... [more]
A0A7S4A8W4_9STRA8.920e-3637.40Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
W7TRN4_9STRA9.840e-3660.87Dna-binding protein smubp-2 n=1 Tax=Nannochloropsi... [more]
A0A7S2YDZ8_9STRA1.280e-3550.64Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S3MFF8_9STRA1.960e-3548.17Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A7S3PU07_9STRA2.260e-3554.79Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041677DNA2/NAM7 helicase, AAA domainPFAMPF13086AAA_11coord: 33..141
e-value: 1.0E-31
score: 110.7
NoneNo IPR availablePANTHERPTHR43788FAMILY NOT NAMEDcoord: 4..227
NoneNo IPR availablePANTHERPTHR43788:SF8DNA POLYMERASE ALPHA-ASSOCIATED DNA HELICASE Acoord: 4..227
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 29..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10623contigE-siliculosus-1a_F_contig10623:473..2239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10623.444.1mRNA_E-siliculosus-1a_F_contig10623.444.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10623 473..2239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10623.444.1 ID=prot_E-siliculosus-1a_F_contig10623.444.1|Name=mRNA_E-siliculosus-1a_F_contig10623.444.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=227bp
SRCQEKVLEHSMEALVSRHEGTAIVKDVRKDIDTLLGRLKSRSRIRGADR
KGARMELKTLRKEARAREGKVVQEVLRSRDVVLATCVGAATHSLREEEFD
LVVIDEAAQALEAACWIPILKGRRLVLAGDHKQLAPTVKSRKAEAGCLLP
SEAVSVPPPQASPRSPGAHGGNSKGGGVGGVGTGGGGGGDGLGLTMFDRV
LRDLGHGVCRMLNVQYRMNRDICDWAS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR041677DNA2/NAM7_AAA_11