mRNA_E-siliculosus-1a_F_contig1062.441.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1062.441.1 vs. uniprot
Match: D7G533_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G533_ECTSI) HSP 1 Score: 372 bits (956), Expect = 9.550e-130 Identity = 194/208 (93.27%), Postives = 198/208 (95.19%), Query Frame = 1
Query: 1 FDRAKLVEILTAPYIEDSGDGIVALDPHALKKLFTTTSNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFFKVLAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQVL 624
FDRAKLVEILTAPYI DSGDGIVALDPHALKKLFTT NLLQEMGVEGERKRLAMAGETGAIEEDYRQGL SHATRLN+VQDSLEGVEHRF+ T HKAVRIGDRLSKMEGQRARAAEAMDLLEF KVLAKLKSITHELESKELD+AAK LQAYSDFLEQELLDLFER AGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQ +
Sbjct: 2 FDRAKLVEILTAPYIGDSGDGIVALDPHALKKLFTTNGNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLASHATRLNEVQDSLEGVEHRFQWTVHKAVRIGDRLSKMEGQRARAAEAMDLLEFLKVLAKLKSITHELESKELDEAAKKLQAYSDFLEQELLDLFERTAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQAV 209
BLAST of mRNA_E-siliculosus-1a_F_contig1062.441.1 vs. uniprot
Match: A0A6H5KKI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI1_9PHAE) HSP 1 Score: 377 bits (967), Expect = 3.170e-129 Identity = 206/244 (84.43%), Postives = 206/244 (84.43%), Query Frame = 1
Query: 1 FDRAKLVEILTAPYIEDSGDGIVALDPHALKKLFTTTSNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFFKV--------------------------------------LAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQ 618
FDRAKLVEILTAPYIEDSGDGIVALDPHALKKLFTTTSNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFFKV LAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQ
Sbjct: 111 FDRAKLVEILTAPYIEDSGDGIVALDPHALKKLFTTTSNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFFKVFEGLPEGFSEDQDTVVRYMKLLPPVFCDEDRRPEAATVLAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQ 354
BLAST of mRNA_E-siliculosus-1a_F_contig1062.441.1 vs. uniprot
Match: D8LCE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCE4_ECTSI) HSP 1 Score: 373 bits (957), Expect = 8.530e-129 Identity = 203/246 (82.52%), Postives = 205/246 (83.33%), Query Frame = 1
Query: 1 FDRAKLVEILTAPYIEDSGDGIVALDPHALKKLFTTTSNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFFKV--------------------------------------LAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQVL 624
FDRAKLVEILTAPYIEDSGDGIVALDPHAL KLFTTT NLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMD+LEFFKV LAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQ +
Sbjct: 36 FDRAKLVEILTAPYIEDSGDGIVALDPHALNKLFTTTGNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDILEFFKVFEGLPEGFSEDQDTVVRYMKLLPPVFCDEDRRAEAATVLAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQAV 281
BLAST of mRNA_E-siliculosus-1a_F_contig1062.441.1 vs. uniprot
Match: D7G517_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G517_ECTSI) HSP 1 Score: 320 bits (821), Expect = 5.350e-109 Identity = 177/208 (85.10%), Postives = 180/208 (86.54%), Query Frame = 1
Query: 1 FDRAKLVEILTAPYIEDSGDGIVALDPHALKKLFTTTSNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFFKVLAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQVL 624
FDRAKLVEILTAPYI DSGDGIVALDPHALKKLFTT NLLQEMGVEGERKRLAMAGETGAIEED RQGLTSHATRLN+ AVRIGDRLSKMEGQRARAAEAMDLLEFFKVLAKLKSITHELESKELDKAAK+ SDFLEQELLDLFER AGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQ +
Sbjct: 35 FDRAKLVEILTAPYIGDSGDGIVALDPHALKKLFTTNGNLLQEMGVEGERKRLAMAGETGAIEEDCRQGLTSHATRLNE------------------AVRIGDRLSKMEGQRARAAEAMDLLEFFKVLAKLKSITHELESKELDKAAKSC---SDFLEQELLDLFERTAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQAV 221
BLAST of mRNA_E-siliculosus-1a_F_contig1062.441.1 vs. uniprot
Match: A0A836C6X2_9STRA (Exocyst complex component Sec10-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X2_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.260e-62 Identity = 117/248 (47.18%), Postives = 154/248 (62.10%), Query Frame = 1
Query: 1 FDRAKLVEILTAPYIEDSGDGIVALDPHALKKLFTTTSNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFFKV----------------------------------------LAKLKSITHELESKELDKAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGDHLQSRFVFFVVTQVL 624
FD AKLVE LT+PYI D G G VALDPHALKKLF+T S +L M E + + + ++E+DYR GL+ H + L + +L V+ RFR+ AVRIGD L + E QRARAA+A++LLE FKV L++L++I+ EL++ L +AA N++AY+DFLE ELLDLFERAAGR+PPE MREC+DIL+ALNEGDHLQ R+V+ VV++ L
Sbjct: 46 FDTAKLVEALTSPYIADDGAGGVALDPHALKKLFSTVSAMLSTMEAEAAEQTAELEQDAESVEDDYRGGLSQHQSTLELLSANLARVDERFRKVTADAVRIGDSLGRKEAQRARAADAIELLEHFKVFDELPEGFADGGGAALAAAARARLPAVFADEDRRMEAARVLSRLRAISFELDAPGLGRAAGNMRAYADFLEAELLDLFERAAGRAPPEAEFMRECADILYALNEGDHLQGRYVYGVVSRRL 293
BLAST of mRNA_E-siliculosus-1a_F_contig1062.441.1 vs. uniprot
Match: A0A0L0HVE8_SPIPD (Uncharacterized protein n=3 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HVE8_SPIPD) HSP 1 Score: 60.5 bits (145), Expect = 3.540e-7 Identity = 54/194 (27.84%), Postives = 88/194 (45.36%), Query Frame = 1
Query: 76 DPHALKKLFTTTSNLLQEMGVEGERKRLAMAGETGAIEEDYRQGLTSHATRLNKVQDSLEGVEHRFRETAHKAVRIGDRLSKMEGQRARAAEAMDLLEFF--------KVLAKLKSITHELE-------------SKELD-----KAAKNLQAYSDFLEQELLDLFERAAGRSPPEVALMRECSDILFALNEGD 579
DP + F + L + + K + + A + R+ L ++ Q + E +E R E A+RIG++L ++ QRARAAEA DL+++F L LK+ HE E +KE+D A N+++YS+ E+ELL+ F+ A + + M EC+ L N G+
Sbjct: 66 DPRPFIRNFEAAIDELLRLKRKVHNKIEDLEDQAAASDTARRKKLAEINDAMHDAQAAFESLESRLGEVGKTAIRIGEQLETIDKQRARAAEAKDLIQYFIEFNAGNSTRLDDLKAAGHEGEYKAAIVVRRLTAVAKEVDIAGAEAARTNIESYSEQFEKELLERFDEAYRDADRHI--MNECAKTLVEFNGGE 257 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1062.441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1062.441.1 >prot_E-siliculosus-1a_F_contig1062.441.1 ID=prot_E-siliculosus-1a_F_contig1062.441.1|Name=mRNA_E-siliculosus-1a_F_contig1062.441.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=208bp FDRAKLVEILTAPYIEDSGDGIVALDPHALKKLFTTTSNLLQEMGVEGERback to top mRNA from alignment at E-siliculosus-1a_F_contig1062:1985..4976+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1062.441.1 ID=mRNA_E-siliculosus-1a_F_contig1062.441.1|Name=mRNA_E-siliculosus-1a_F_contig1062.441.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2992bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1062:1985..4976+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1062:1985..4976+ >mRNA_E-siliculosus-1a_F_contig1062.441.1 ID=mRNA_E-siliculosus-1a_F_contig1062.441.1|Name=mRNA_E-siliculosus-1a_F_contig1062.441.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1248bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1062:1985..4976+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |