Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Match:
D8LLQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ3_ECTSI)
HSP 1 Score: 279 bits (713), Expect = 9.400e-84
Identity = 148/184 (80.43%), Postives = 152/184 (82.61%), Query Frame = 1
Query: 4 DTAEIFNSHGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVIVDAAPTDTDTYDNGSDDSNSN----------RGTSQSPTGPLASAMDNNDNVVHGDANAGVKDITSGGQAYTNVISRTPGFPDEDELDKLPMRDLGSCDELHLDRTPLDGRVFVMGHIVCHEKR 525
DTAEIFN GELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVIVD APTDT+TYDNGS RGTSQSPTGPL+SAMDNN NVVHGDANAGV DIT Q YT+VISRTPGFP EDELDKLPMR LGSCDEL LDRTPLDGRVF+ G IVC KR
Sbjct: 329 DTAEIFNVDGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVIVDVAPTDTNTYDNGSXXXXXXXXXXXXXXXXRGTSQSPTGPLSSAMDNNHNVVHGDANAGVTDITPVRQTYTDVISRTPGFPGEDELDKLPMRGLGSCDELPLDRTPLDGRVFITGDIVCDVKR 512
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Match:
A0A6H5JIS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS5_9PHAE)
HSP 1 Score: 259 bits (663), Expect = 2.350e-82
Identity = 139/189 (73.54%), Postives = 149/189 (78.84%), Query Frame = 1
Query: 4 DTAEIFNSHGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVIVDAAPTDTDTYDNGSDDSNSN---------------RGTSQSPTGPLASAMDNNDNVVHGDANAGVKDITSGGQAYTNVISRTPGFPDEDELDKLPMRDLGSCDELHLDRTPLDGRVFVMGHIVCHEKR 525
DTAEIF GELHLR DQHRFDDLVNTRT+DPHDT RGSPDGDIIT+G S LRFSETSVIVDAA TDTDTYDNG D+ RGTSQSPTGPL+SAMDNN NVVHGDANAGV DIT G Q YTNVISRT GFPD+DELDKLPMRDLG EL LDR+PL GRVF++G IVCH+K+
Sbjct: 16 DTAEIFTVDGELHLRADQHRFDDLVNTRTNDPHDTSRGSPDGDIITHGGSMLRFSETSVIVDAAATDTDTYDNGIDNXXXXXXXXXXXXXXXXXXXRGTSQSPTGPLSSAMDNNHNVVHGDANAGVTDITPGRQTYTNVISRTTGFPDDDELDKLPMRDLGPRGELPLDRSPLHGRVFIIGDIVCHKKQ 204
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Match:
D8LLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ5_ECTSI)
HSP 1 Score: 128 bits (322), Expect = 3.630e-31
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 1
Query: 4 DTAEIFNSHGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVIVDAAPTDTDTYD 219
D+ EIFN HGELHLRGDQHRFDDLV+TR DDPHDTI GSPDGDIITYG S LRFSETSVIVDAAPTDT+TYD
Sbjct: 327 DSVEIFNLHGELHLRGDQHRFDDLVDTRMDDPHDTIHGSPDGDIITYGGSMLRFSETSVIVDAAPTDTNTYD 398
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Match:
D8LLS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS3_ECTSI)
HSP 1 Score: 127 bits (320), Expect = 6.680e-31
Identity = 63/70 (90.00%), Postives = 65/70 (92.86%), Query Frame = 1
Query: 4 DTAEIFNSHGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVIVDAAPTDTDT 213
D+ EIFN HGELHLRGDQHRFDDLV+TRTDDPHDTI GSPDGDIITYG S LRFSETSVIVDAAPTDTDT
Sbjct: 325 DSVEIFNLHGELHLRGDQHRFDDLVDTRTDDPHDTIHGSPDGDIITYGGSMLRFSETSVIVDAAPTDTDT 394
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Match:
A0A6H5L4D7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D7_9PHAE)
HSP 1 Score: 114 bits (285), Expect = 3.750e-29
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 1
Query: 4 DTAEIFNSHGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGVSTLRFSETSVI 183
DTAEIFN +GELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYG S LRFSETSVI
Sbjct: 16 DTAEIFNVNGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGGSMLRFSETSVI 75
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Match:
A0A6H5L8D9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D9_9PHAE)
HSP 1 Score: 98.6 bits (244), Expect = 1.070e-20
Identity = 57/100 (57.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query: 232 DSNSNRGTSQSPTGPLASAMDNNDNVVH-GDANAGVKDITSGG-QAYTNVISRTPGFPDEDELDKLPMRDLGSCDELHLDRTPLDGRVFVMGHIVCHEKR 525
D+ NRGT QS ++A D+N N G+A+AGV D+TSGG AY+N IS TP F D+ E DKLP R+LGSCDEL LDR P GRVF+ G IVC KR
Sbjct: 743 DNEDNRGTCQSTVEHPSTATDDNHNAAAPGNADAGVIDVTSGGGHAYSNSISTTPRFHDDAEWDKLPRRNLGSCDELALDRNPPHGRVFITGDIVCDVKR 842
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Match:
D7G9G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G6_ECTSI)
HSP 1 Score: 70.9 bits (172), Expect = 4.350e-11
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 358 QAYTNVISRTPGFPDEDELDKLPMRDLGSCDELHLDRTPLDGRVFVMGHIVCHEKR 525
+AYT I RT +PD +++LP+R LGSCDEL LDR LDG V+V G IVC EKR
Sbjct: 439 EAYTPFIPRTKVYPDASYINRLPIRSLGSCDELPLDRNRLDGAVYVTGPIVCDEKR 494
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Match:
A0A6H5L206_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L206_9PHAE)
HSP 1 Score: 58.9 bits (141), Expect = 4.510e-7
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 1
Query: 4 DTAEIFNSHGELHLRGDQHRFDDLVNTRT 90
DTAEIFN +GELHLRGDQHRFDDLVNTRT
Sbjct: 337 DTAEIFNVNGELHLRGDQHRFDDLVNTRT 365
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10587.418.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 8
0 1 Expect = 9.40e-84 / Id = 80.43 Expect = 2.35e-82 / Id = 73.54 Expect = 3.63e-31 / Id = 87.50 Expect = 6.68e-31 / Id = 90.00 Expect = 3.75e-29 / Id = 93.33 Expect = 1.07e-20 / Id = 57.00 Expect = 4.35e-11 / Id = 58.93 Expect = 4.51e-7 / Id = 93.10 Sequence D8LLQ3_ECTSI A0A6H5JIS5_9PHAE D8LLQ5_ECTSI D8LLS3_ECTSI A0A6H5L4D7_9PHAE A0A6H5L8D9_9PHAE D7G9G6_ECTSI A0A6H5L206_9PHAE
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10587.418.1
>prot_E-siliculosus-1a_F_contig10587.418.1 ID=prot_E-siliculosus-1a_F_contig10587.418.1|Name=mRNA_E-siliculosus-1a_F_contig10587.418.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=175bp
DDTAEIFNSHGELHLRGDQHRFDDLVNTRTDDPHDTIRGSPDGDIITYGV STLRFSETSVIVDAAPTDTDTYDNGSDDSNSNRGTSQSPTGPLASAMDNN DNVVHGDANAGVKDITSGGQAYTNVISRTPGFPDEDELDKLPMRDLGSCD ELHLDRTPLDGRVFVMGHIVCHEKR back to top mRNA from alignment at E-siliculosus-1a_F_contig10587:390..1771+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10587.418.1 ID=mRNA_E-siliculosus-1a_F_contig10587.418.1|Name=mRNA_E-siliculosus-1a_F_contig10587.418.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1382bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10587:390..1771+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GACGATACGGCCGAGATCTTCAACTCGCACGGCGAATTGCACCTACGCGG
CGACCAGCATCGCTTCGACGATCTGGTCAACACGAGGACG GTGAGCTCTT
GTTGTTGTTGGCTGTCCTTGTTTTGGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTCGTCGTCGTTGTCGTTGTTGTTGTCGGTGGTGCTTTGTTA
GCGACCCCATTGCCACATGTCTCGTGGTCAGGACAGACGTGTCTCTATCT
GAACACCTGCCTCCACGATGTTATGAGACCGACCTAACGTGTGCCAGCAT
TGCTGCTTGCTTAGTTATTTTCAACCAGGAACGCACCTGATTTGCCAGGA
GCTGCCGTGCCTTGCACCTATTTGGACCTGACAACGCTCAAGCACCAACT
CCGTTGCGACTCAATGCTTTACATGTCCACCGCTCCAACACCAACCGAAG
CAGCTTCACATATACATACACCTTGGCACCCTGGCCTTCGCCCCTCACGC
GTGGAATAGTCATGTTCAGTTCAGCTCAGCTCCCGCTATCACACGTTCCG
CAACCTATCCCTCACACACACAGAGAGCCTTATTCTCTGGTTGCAATCTC
CCCAAAGCCTAACCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCGCTATCACACGTTCCGCAACCCATCCCTCAC
CCCCCCAGAGAGCCTTTTTCTCTGGTTGCAACCTCCCCAAAGCCCAACCC
CCCCCCCCCCCCCCGGCCCTCCCCTTCCCACCCCTTCTGCCGTCGTGTGC
CCGCGTGCTGTTGGCCATGTTACAATATTTACTCCACAACCCTAGGACGA
CCCACACGATACGATCCGCGGTTCCCCCGATGGCGATATCATCACCTACG
GCGTTTCGACGCTACGCTTCAGCGAGACCTCCGTCATCGTCGATGCTGCC
CCCACCGACACCGACACCTACGACAACGGTAGCGACGACAGCAACAGCAA
CAGAGGCACTTCGCAATCCCCCACGGGGCCCCTGGCTTCTGCCATGGACA
ACAACGACAACGTTGTCCACGGTGATGCCAATGCCGGTGTCAAGGACATC
ACCTCTGGCGGACAGGCGTACACCAACGTAATCTCCAGGACTCCAGGATT
CCCTGACGAAGATGAGTTGGACAAGCTGCCGATGAGGGACCTGGGCTCTT
GCGACGAGCTCCACCTTGATCGGACCCCCCTGGACGGCAGAGTCTTCGTC
ATGGGCCACATCGTCTGCCACGAGAAACGG GT back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10587:390..1771+
>mRNA_E-siliculosus-1a_F_contig10587.418.1 ID=mRNA_E-siliculosus-1a_F_contig10587.418.1|Name=mRNA_E-siliculosus-1a_F_contig10587.418.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1050bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10587:390..1771+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female) GACGATACGGCCGAGATCTTCAACTCGCACGGCGAATTGCACCTACGCGG CGACCAGCATCGCTTCGACGATCTGGTCAACACGAGGACGGACGATACGG CCGAGATCTTCAACTCGCACGGCGAATTGCACCTACGCGGCGACCAGCAT CGCTTCGACGATCTGGTCAACACGAGGACGGACGACCCACACGATACGAT CCGCGGTTCCCCCGATGGCGATATCATCACCTACGGCGTTTCGACGCTAC GCTTCAGCGAGACCTCCGTCATCGTCGATGCTGCCCCCACCGACACCGAC ACCTACGACAACGGTAGCGACGACAGCAACAGCAACAGAGGCACTTCGCA ATCCCCCACGGGGCCCCTGGCTTCTGCCATGGACAACAACGACAACGTTG TCCACGGTGATGCCAATGCCGGTGTCAAGGACATCACCTCTGGCGGACAG GCGTACACCAACGTAATCTCCAGGACTCCAGGATTCCCTGACGAAGATGA GTTGGACAAGCTGCCGATGAGGGACCTGGGCTCTTGCGACGAGCTCCACC TTGATCGGACCCCCCTGGACGGCAGAGTCTTCGTCATGGGCCACATCGTC TGCCACGAGAAACGGGACGACCCACACGATACGATCCGCGGTTCCCCCGA TGGCGATATCATCACCTACGGCGTTTCGACGCTACGCTTCAGCGAGACCT CCGTCATCGTCGATGCTGCCCCCACCGACACCGACACCTACGACAACGGT AGCGACGACAGCAACAGCAACAGAGGCACTTCGCAATCCCCCACGGGGCC CCTGGCTTCTGCCATGGACAACAACGACAACGTTGTCCACGGTGATGCCA ATGCCGGTGTCAAGGACATCACCTCTGGCGGACAGGCGTACACCAACGTA ATCTCCAGGACTCCAGGATTCCCTGACGAAGATGAGTTGGACAAGCTGCC GATGAGGGACCTGGGCTCTTGCGACGAGCTCCACCTTGATCGGACCCCCC TGGACGGCAGAGTCTTCGTCATGGGCCACATCGTCTGCCACGAGAAACGG back to top