prot_E-siliculosus-1a_F_contig10572.412.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10572.412.1
Unique Nameprot_E-siliculosus-1a_F_contig10572.412.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length308
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10572.412.1 vs. uniprot
Match: A0A6H5KF95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF95_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.340e-35
Identity = 71/114 (62.28%), Postives = 80/114 (70.18%), Query Frame = 0 
Query:    8 GATAWRNNVRWPGLDGKPLPDQCATAHYLYEVVDRCALDGVLIVDASGVGHPRRGSGLV-RGDADTKRLMKQHIRCLLEGGARIIEVHSASATEHFIDALEEMGT-GGSHDLRV 119
            G    RNNVRWPGLDG  +PDQC +AHYLY+V +R  LDGVLIVDASGV  PR   G   RGDA T   +K HIRC LEG ARI+EVH+A AT  F+DALE     GGSH +RV
Sbjct:   47 GVEVCRNNVRWPGLDGHAIPDQCTSAHYLYQVSNRGGLDGVLIVDASGVAAPRGWIGASERGDAGTTNPLKPHIRCFLEGRARIVEVHNARATARFVDALEGRAVAGGSHGVRV 160
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BLAST of mRNA_E-siliculosus-1a_F_contig10572.412.1 vs. uniprot
Match: D8LH22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH22_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.100e-16
Identity = 37/53 (69.81%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:    7 DGATAWRNNVRWPGLDGKPLPDQCATAHYLYEVVDRCALDGVLIVDASGVGHP 59
            DG   WR NVRWP LDG  +PDQC TAHYLY+V DR  LD VLIVDASGV  P
Sbjct:   59 DGIKVWRINVRWPSLDGHAIPDQCTTAHYLYQVADRGGLDDVLIVDASGVAPP 111
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10572.412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF95_9PHAE1.340e-3562.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH22_ECTSI2.100e-1669.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 274..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10572contigE-siliculosus-1a_F_contig10572:113..1565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10572.412.1mRNA_E-siliculosus-1a_F_contig10572.412.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10572 113..1567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10572.412.1 ID=prot_E-siliculosus-1a_F_contig10572.412.1|Name=mRNA_E-siliculosus-1a_F_contig10572.412.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=308bp
RACFRIDGATAWRNNVRWPGLDGKPLPDQCATAHYLYEVVDRCALDGVLI
VDASGVGHPRRGSGLVRGDADTKRLMKQHIRCLLEGGARIIEVHSASATE
HFIDALEEMGTGGSHDLRVPFGSSIVRAHVFFDVPCVGGQGWDTVVVIGT
NHHCMMRTPLNAASIVRRQIFASALGGRQLDPEQVDKLWGMVAGATMTNE
EWTENYATLLEELSPEELAVFDRFKEQHAEDMNSAWVSLISHRGGKNSWM
GQTAGKTVAGSAEKVAAAEQALPAAKTRARRAAAKEALKAATAEHDMVTG
AREHQSDG
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