mRNA_E-siliculosus-1a_F_contig10.40.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10.40.1
Unique NamemRNA_E-siliculosus-1a_F_contig10.40.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: D7G0V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V4_ECTSI)

HSP 1 Score: 717 bits (1850), Expect = 1.310e-234
Identity = 411/456 (90.13%), Postives = 424/456 (92.98%), Query Frame = 1 
Query:    1 GEVDEARLRREIPPPILERLQRELLNSSLPSGPGFTAPNSDAASATPYSAGSSFSSSSYLSRSGRNDVGARISRRLGATGPVPSSSGPGVSSPVSSFSPMAGRRGGSGGVGDGNRDLRRXXXXXXXXXXXXXXXGEERWIAAAPDESWRREQEATRGELGDSDDDDGCGSDFAGGLGMGSLSSPPHRASPSLRRSRNWAGVRIYPAEGHADTAREDQQQRQQDGAARCHPRLRRGAADPNDETTTAISARAASISSPGRGGTGERGXXXXXXAKRR--SSKAKVFHCREAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKASTVNLLALEGVVRLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVKPILLTKYV 1362
            GEV EARLRREIPPPILERLQRELLNSSLPSGPGFTA NSDAASATPYSAGSSFSS SYL+RSGRNDVGARISRRLGATGPVPSSSGPGVSSP SSFSP AGRRGGSGGVGDGNRDLRRXXXXXXXXXXXXXXXGEERW+AAAP ESWRRE E  RGELGDSDDDDGCGSDFAGGLGMGSLSSPPHRASPS+ RSRNWAG   YPAEGHADTARE+Q+QRQQD AAR HPRL+RGA DPND+TTT   ARA SISSPG+GG GERGXXXXXX      SSKAKVFHCREAELLPEVYARLDSGDWRERLKGLEEATSLLEEHG+NLHAAGKS+RLVDRVADLLSDGNLK   VNLLALEGVVRLGASMG+KLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLR+ITPEVGDVKPILLT  +
Sbjct: 1782 GEVGEARLRREIPPPILERLQRELLNSSLPSGPGFTATNSDAASATPYSAGSSFSSPSYLNRSGRNDVGARISRRLGATGPVPSSSGPGVSSPASSFSPTAGRRGGSGGVGDGNRDLRRXXXXXXXXXXXXXXXGEERWVAAAPGESWRREHEGARGELGDSDDDDGCGSDFAGGLGMGSLSSPPHRASPSVPRSRNWAGR--YPAEGHADTAREEQRQRQQDAAARYHPRLQRGAGDPNDKTTTTTPARATSISSPGKGGIGERGXXXXXXXXXXXXSSKAKVFHCREAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGNNLHAAGKSARLVDRVADLLSDGNLK---VNLLALEGVVRLGASMGSKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLREITPEVGDVKPILLTNSI 2232
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BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: A0A6H5L523_9PHAE (CLASP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L523_9PHAE)

HSP 1 Score: 324 bits (831), Expect = 2.530e-93
Identity = 188/200 (94.00%), Postives = 191/200 (95.50%), Query Frame = 1 
Query:    1 GEVDEARLRREIPPPILERLQRELLNSSLPSGPGFTAPNSDAASATPYSAGSSFSSSSYLSRSGRNDVGARISRRLGATGPVPSSSGPGVSSPVSSFSPMAGRRGGSGGVGDGNRDLRRXXXXXXXXXXXXXXXGEERWIAAAPDESWRREQEATRGELGDSDDDDGCGSDFAGGLGMGSLSSPPHRASPSLRRSRNWAG 600
            GEVDEARLRREIPPPILERLQRELLN SLPSGPGFTAPNSDAASATPYSAGSSFSSSSYLSRSGRNDVGARISRRLGATGPVPSSSGPGVSSP SSFSP AG RGGSGGVGDGNRD+RR XXXXXXXXXXXXXXGEERWIAAAP ESWRREQE  RGELGDSDDDDGCGSDFAGGLGMGSLS+PPHRASPS+ RSRNWAG
Sbjct: 1757 GEVDEARLRREIPPPILERLQRELLNFSLPSGPGFTAPNSDAASATPYSAGSSFSSSSYLSRSGRNDVGARISRRLGATGPVPSSSGPGVSSPGSSFSPTAGHRGGSGGVGDGNRDIRRRXXXXXXXXXXXXXXGEERWIAAAPGESWRREQEGARGELGDSDDDDGCGSDFAGGLGMGSLSTPPHRASPSVPRSRNWAG 1956
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BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: A0A662YFC5_9STRA (Protein kinase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFC5_9STRA)

HSP 1 Score: 115 bits (288), Expect = 5.850e-23
Identity = 74/211 (35.07%), Postives = 119/211 (56.40%), Query Frame = 1 
Query:  859 EAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKASTVNLLALEGVVRLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVK-PILLTKYVRPTALSLVRENHPNVRDAGLSLLRAVEVALDPSSISYSPSRV 1488
            + E L  +  +LDSG+W++R   L E T  +      L  +GK   L D +A  + DGN K   VN+LALE + ++  ++GN +E V+++ VPAV K+LA++N +  ALA+  +  LC  VD  L  Q VA  A++ N+R+K  +L  L  +T +  D K    L +YV P AL L++E    V++A   L+R +  AL   ++  + S++
Sbjct: 1424 DTEELARLELKLDSGNWKDRFDALNEVTEFICGCARGLVDSGKLLGLFDVLAKRMDDGNAK---VNVLALECLEKVVPALGNGMEQVLSSFVPAVTKSLAANNPRLSALAQSVVQVLCSHVDARLLCQYVAVQARHSNSRVKPLLLDTLTKLTAQCSDDKGEYALNRYVLPLALELLKEPKSGVKEANAVLIRQLHAALGTPAVLTASSKL 1631
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BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: A0A662WR45_9STRA (Mitogen-activated protein kinase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WR45_9STRA)

HSP 1 Score: 111 bits (278), Expect = 9.720e-22
Identity = 72/211 (34.12%), Postives = 117/211 (55.45%), Query Frame = 1 
Query:  859 EAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKASTVNLLALEGVVRLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVKP-ILLTKYVRPTALSLVRENHPNVRDAGLSLLRAVEVALDPSSISYSPSRV 1488
            + E L  +  +LDSG+W++R   L E T+ +      L  +GK   L D +   + DGN K   VN+LALE + +   ++GN +E V+++ VPA+ K+LA++N +  ALA+  +  LC  VD  L  Q  A  A++ N+R+K  +L  L  +T +  D K    L +YV P AL L++E    V++A   L+R +   L P +I  + S++
Sbjct: 1784 DTEELTRLELKLDSGNWKDRFDALNEVTAFICGCARGLVDSGKLVVLFDVLVKRMDDGNAK---VNVLALECLEKAVPALGNGMEQVLSSFVPAITKSLAANNPRLSALAQSVVQVLCSHVDARLLCQYFAVQARHSNSRVKPLLLDTLTKLTAQSRDDKSDYALNRYVLPLALELLKEAKSGVKEANALLIRQLHAVLGPPAILTASSKL 1991
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: A0A7S4PLE0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PLE0_GUITH)

HSP 1 Score: 109 bits (272), Expect = 3.950e-21
Identity = 65/203 (32.02%), Postives = 113/203 (55.67%), Query Frame = 1 
Query:  871 LPEVYARLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKASTVNLLALEGVVRLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVKPILLTKYVRPTALSLVRENHPNVRDAGLSLLRAVEVALDPSSISYSP 1479
            +P + + ++S D+R R   + E T L+ +      +  ++S  VD     L D N+K   V L AL+GV R+  + G  L+     LVPAVC NL++++ Q   LA   L+++C +VDP +  QP+ S  ++GN R +  +L  +R++ P++G  KP+LL K    +A+ L+ E+  +VR A  +L+  +  A+  S  + +P
Sbjct:  783 VPLIASSINSNDFRSRYDAVNELTELILKEPQVFQS--RTSYFVDMFIGRLGDNNVK---VALAALQGVDRVVETYGGMLDSSAAVLVPAVCANLSNTSPQIRTLASSVLESICNSVDPTVLAQPLCSSLEFGNQRARPALLERMRELVPQLGTKKPVLLQKLFLTSAIKLLEEHKSDVRAANSALVVELYNAMGDSMFNGNP 980
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BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: A0A7S1XRK2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRK2_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.210e-20
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 1 
Query:  859 EAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKASTVNLLAL-EGVV-RLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVKPILLTKYVRPTALSLVRENHPNVRDAGLSLLRAVEVAL 1452
            E E LP +Y  L S  W ER    +   ++++ + D+  AAGK ++  D + +   D N    T  L  L +GV+  L     N LE      +P +     S+ +   A A+E L     + DP   +QPVASL ++GNAR++  ++A L ++TP+V   KP+L+ KYV P A +L R+     R  G  L+R+++ +L
Sbjct:   63 EFEELPGLYRELLSSSWSERKDAFDRLGAIVKANPDDFAAAGKLAKAFDALVERAGDPNPTLQTHALHDLRDGVLPALAGRRKNHLEEFAPAAIPVIAGACVSARRGAQAAAQETLALYLSSTDPLRTLQPVASLVEHGNARMRETLVAHLAELTPQVYLRKPVLVGKYVPPAAAALFRDRSAAARQQGQQLVRSLKGSL 262
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BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: A0A7S1SVF7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SVF7_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 4.130e-15
Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 1 
Query:  889 RLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKS--SRLVDRVADLLSDGNLKASTVNLLALEGVVRLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDI 1314
            +LDS DWRER  GL     L       LH   +S  + L+D + + LSDGN K   VN+LALE V  +  S+GN +   +NTL+PA+  N AS+N++  + A +A+DAL  +VD  L VQ ++ +  +G+AR K  M+  L  +
Sbjct:   14 QLDSKDWRERSAGLRALGDLK----TVLHTLPESQVALLLDSITNRLSDGNSK---VNVLALETVESILPSLGNAVGVGLNTLIPALSANAASTNEKIRSKAVDAMDALVASVDGALLVQNLSHVISHGSARSKAVMIERLEAV 150
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: A0A7R9U3H6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3H6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.380e-14
Identity = 59/215 (27.44%), Postives = 103/215 (47.91%), Query Frame = 1 
Query:  820 KRRSSKAKVFHCREAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKASTVNLLALEGVVRLGASMG-NKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVKPILLTKYVRPTALSLVRENHPNVRDAGLSLLRAVEVALDPS 1461
            +RR++ AK     E E LPEVY +L S  W ER    +    ++ +H     AAGK  +  D + + ++D N K     L  L+  V    S   + L     + VP +     S+ +     A E L      VD    +QP+ASL ++GN R++  M+  L  ++ +V + +P+L++KYV P   +++R+        G  ++++++ A   S
Sbjct:   19 RRRTTMAKQIP--EFEELPEVYRQLLSSTWTERKASFDRLADIVCQHTAEFAAAGKLPKAFDALVECVADPNPKLMAHALTELKDRVFPSLSRHQHHLSDFAPSAVPTLAGACVSARRGAQRSAHETLRDFIARVDSTRVLQPIASLVEHGNQRMRETMMPHLAPVSADVYEKRPMLVSKYVPPAVAAVLRDRSGASHHQGQQIVKSLKEAFGES 231
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: UPI001425B6CE (TOG array regulator of axonemal microtubules protein 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B6CE)

HSP 1 Score: 87.0 bits (214), Expect = 4.600e-14
Identity = 68/223 (30.49%), Postives = 103/223 (46.19%), Query Frame = 1 
Query:  820 KRRSSKAKVFHCREAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKASTVNLLALEGVVRLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVKPILLTKYVRPTALSL---------VRENHPNVRDAGLSLLRAVEVALDPS 1461
            K+    AKV   + AE +  ++  L S +W  RLKG+     +  E+ D +  AG   ++ D     L D N K   VNL AL+ +  +   +   L  VV  +VP++  NLAS N      +   LD L E VDP + VQP  +  QYGN R+K PM+  L D++  V   K   + +++ P    L         V     N+RDA  +L + +   +  S
Sbjct:  820 KKGKRSAKVDE-QSAESIKTLHKDLSSSEWTVRLKGINTLQDMCVENPDLI--AGNIVKVFDAFILRLQDSNSK---VNLQALQTMEDIVPRLAEYLPAVVQRIVPSLASNLASKNSSIAQTSSGILDLLMEHVDPAVLVQPFCNATQYGNTRVKPPMIRKLSDLSAMVWPKKQQSIIRFMLPVLDHLLSNMSGSGAVHGGTGNIRDATNALAKKLHSLMGDS 1036
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Match: A0A815J6Z4_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A815J6Z4_9BILA)

HSP 1 Score: 85.1 bits (209), Expect = 1.850e-13
Identity = 61/190 (32.11%), Postives = 101/190 (53.16%), Query Frame = 1 
Query:  829 SSKAKVFHCREAELLPEVYARLDSGDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKASTVNLLALEGVVRLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEALDALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVKPILLTKYVRPT---ALSLVR 1389
            SS  K+    +AE + E+  ++ S D+RERL G+EE   L E   D   A     ++ D   D L+D N K   V L AL  + ++   +G+ L  VVN+ +P +  N+AS N++   LA + +D   E +D  + +QP+ +L+Q  N R++  ++  L ++ P V   KP  +  ++ PT    LSL+R
Sbjct:  817 SSTRKIHTADQAEQVRELTKQMRSSDFRERLNGIEEFQKLCELETDT--AIQSLVQIFDGFNDCLADMNSK---VVLKALNTMHQVIPILGDALSSVVNSALPLIAHNIASKNREISQLASDIIDTAIEYIDCGVLIQPLCTLSQNSNLRIRPEIVLKLANLAPRVCQRKPKQVEIHLLPTYWKLLSLLR 1001
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0V4_ECTSI1.310e-23490.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L523_9PHAE2.530e-9394.00CLASP_N domain-containing protein n=1 Tax=Ectocarp... [more]
A0A662YFC5_9STRA5.850e-2335.07Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A662WR45_9STRA9.720e-2234.12Mitogen-activated protein kinase n=1 Tax=Nothophyt... [more]
A0A7S4PLE0_GUITH3.950e-2132.02Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S1XRK2_9STRA2.210e-2032.50Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1SVF7_9CHLO4.130e-1539.58Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A7R9U3H6_9STRA1.380e-1427.44Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
UPI001425B6CE4.600e-1430.49TOG array regulator of axonemal microtubules prote... [more]
A0A815J6Z4_9BILA1.850e-1332.11Hypothetical protein n=1 Tax=Rotaria sordida TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10contigE-siliculosus-1a_F_contig10:64689..69120 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1770
Model size1770
Exons7
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.Q
EggNOG OGsKOG2933@1,KOG2933@2759
EggNOG free text desc.non-motile cilium assembly
Seed eggNOG ortholog2880.D7G0V4
Seed ortholog evalue2.9e-206
Seed ortholog score724.9
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927502.8056672-CDS-E-siliculosus-1a_F_contig10:64688..651031622927502.8056672-CDS-E-siliculosus-1a_F_contig10:64688..65103Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 64689..65103 -
1696318554.468335-CDS-E-siliculosus-1a_F_contig10:64688..651031696318554.468335-CDS-E-siliculosus-1a_F_contig10:64688..65103Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 64689..65103 -
1622927502.8231304-CDS-E-siliculosus-1a_F_contig10:65756..658271622927502.8231304-CDS-E-siliculosus-1a_F_contig10:65756..65827Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 65757..65827 -
1696318554.482662-CDS-E-siliculosus-1a_F_contig10:65756..658271696318554.482662-CDS-E-siliculosus-1a_F_contig10:65756..65827Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 65757..65827 -
1622927502.8375983-CDS-E-siliculosus-1a_F_contig10:66302..664131622927502.8375983-CDS-E-siliculosus-1a_F_contig10:66302..66413Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 66303..66413 -
1696318554.4914236-CDS-E-siliculosus-1a_F_contig10:66302..664131696318554.4914236-CDS-E-siliculosus-1a_F_contig10:66302..66413Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 66303..66413 -
1622927502.8528295-CDS-E-siliculosus-1a_F_contig10:66658..667811622927502.8528295-CDS-E-siliculosus-1a_F_contig10:66658..66781Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 66659..66781 -
1696318554.500861-CDS-E-siliculosus-1a_F_contig10:66658..667811696318554.500861-CDS-E-siliculosus-1a_F_contig10:66658..66781Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 66659..66781 -
1622927502.8703475-CDS-E-siliculosus-1a_F_contig10:66949..670631622927502.8703475-CDS-E-siliculosus-1a_F_contig10:66949..67063Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 66950..67063 -
1696318554.5103414-CDS-E-siliculosus-1a_F_contig10:66949..670631696318554.5103414-CDS-E-siliculosus-1a_F_contig10:66949..67063Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 66950..67063 -
1622927502.8885667-CDS-E-siliculosus-1a_F_contig10:67833..681601622927502.8885667-CDS-E-siliculosus-1a_F_contig10:67833..68160Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 67834..68160 -
1696318554.5205963-CDS-E-siliculosus-1a_F_contig10:67833..681601696318554.5205963-CDS-E-siliculosus-1a_F_contig10:67833..68160Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 67834..68160 -
1622927502.9044597-CDS-E-siliculosus-1a_F_contig10:68511..691201622927502.9044597-CDS-E-siliculosus-1a_F_contig10:68511..69120Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 68512..69120 -
1696318554.5300095-CDS-E-siliculosus-1a_F_contig10:68511..691201696318554.5300095-CDS-E-siliculosus-1a_F_contig10:68511..69120Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10 68512..69120 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10.40.1prot_E-siliculosus-1a_F_contig10.40.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10 64689..69120 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10.40.1

>prot_E-siliculosus-1a_F_contig10.40.1 ID=prot_E-siliculosus-1a_F_contig10.40.1|Name=mRNA_E-siliculosus-1a_F_contig10.40.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=590bp
GEVDEARLRREIPPPILERLQRELLNSSLPSGPGFTAPNSDAASATPYSA
GSSFSSSSYLSRSGRNDVGARISRRLGATGPVPSSSGPGVSSPVSSFSPM
AGRRGGSGGVGDGNRDLRRRRTEGAGSGGGGGGRGEERWIAAAPDESWRR
EQEATRGELGDSDDDDGCGSDFAGGLGMGSLSSPPHRASPSLRRSRNWAG
VRIYPAEGHADTAREDQQQRQQDGAARCHPRLRRGAADPNDETTTAISAR
AASISSPGRGGTGERGGGRSSSAKRRSSKAKVFHCREAELLPEVYARLDS
GDWRERLKGLEEATSLLEEHGDNLHAAGKSSRLVDRVADLLSDGNLKAST
VNLLALEGVVRLGASMGNKLEPVVNTLVPAVCKNLASSNQQRVALAEEAL
DALCEAVDPCLFVQPVASLAQYGNARLKVPMLAFLRDITPEVGDVKPILL
TKYVRPTALSLVRENHPNVRDAGLSLLRAVEVALDPSSISYSPSRVRRSN
SSGQNGERRDRGRGGGSGGGGATGSRGGVRGKDTRRREDDSVAGRIRDLR
QEEEAYPQSVSSATTTSSSDDYHRQLGRIIPREGFGRTR*
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mRNA from alignment at E-siliculosus-1a_F_contig10:64689..69120-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10.40.1 ID=mRNA_E-siliculosus-1a_F_contig10.40.1|Name=mRNA_E-siliculosus-1a_F_contig10.40.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4432bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:64689..69120- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCGAGGTGGACGAGGCTCGGCTCCGGAGAGAAATTCCTCCCCCGATACT
GGAACGCCTTCAGCGGGAGCTGCTGAACTCCTCCCTGCCGTCGGGCCCGG
GCTTCACCGCTCCAAACTCTGATGCCGCTTCCGCCACCCCCTATTCAGCG
GGGTCATCGTTCTCCTCCTCTTCCTACCTGAGTCGAAGCGGTCGCAACGA
CGTGGGCGCCAGAATCAGCCGCAGACTCGGCGCCACCGGACCCGTGCCTT
CATCGAGTGGCCCCGGGGTCTCTTCGCCTGTAAGCAGCTTTTCACCGATG
GCAGGGCGCCGCGGTGGAAGCGGTGGCGTCGGCGATGGCAACCGAGACCT
TAGAAGAAGGCGTACAGAGGGCGCTGGGAGCGGCGGCGGAGGCGGAGGTA
GGGGTGAGGAGAGGTGGATCGCCGCCGCGCCCGACGAAAGCTGGCGGCGA
GAGCAAGAAGCTACGCGAGGCGAGCTTGGTGACAGCGATGATGACGATGG
GTGCGGTAGTGACTTCGCGGGGGGGTTGGGGATGGGGTCGTTGTCCTCTC
CCCCGCATCGCGCGTCACCTTCGCTACGTCGATCGAGAAACTGGGCTGGG
GTGAGAATCGTTCAGATGTGAATCCTTGCTCTTTAGATTAGACCGAGCTT
TGGTTCGGGCGAGCACTCGTAAGGGCCCACCAGTGTAGTTGGCATACCAA
CCATCGCTGAGATGTAAATTTGCGACTCTGATGAGGAAATCGAGGAAGTG
GCCCTGCTCCACAAGAGTGCTGAGGCCTTTCAAACCAAGTTGTTCCGAAA
CGTTCCTTCTGAGACTGTGTAAAGAAACTCGCACGTCGTGGTGTTGGCAA
AGGCCTGGAAACTGGCACCACTCGCCTGGCAAAGATTTCTGAAGAAGCCA
CGAAAAAGGTCTAGTCCCAACCACTCCTGTAACAAGCCGCCACCGGCGTC
GCTCCGACAGTATCCGGCAGAAGGTCACGCCGATACCGCCAGGGAAGACC
AGCAGCAACGACAGCAAGACGGTGCAGCACGATGTCACCCGCGACTGCGA
CGGGGAGCGGCCGATCCAAACGACGAGACCACCACCGCCATCTCGGCAAG
GGCGGCTTCGATTTCTTCGCCGGGGAGGGGGGGTACCGGCGAACGCGGCG
GCGGTCGCAGCAGCAGCGCAAAGAGGCGTTCGAGCAAAGCCAAAGTGTTT
CATTGTCGGGAAGCGGAACTGCTGCCAGAGGTGTACGCCCGCTTGGACTC
GGGAGACTGGAGGGAGCGTCTGAAAGGGCTGGAAGAGGTATGGTAGATGC
GTTTTTGGTCGTTGCTTTTGCGTTGAGTGTAAGTTGGTCGTTCAGATACA
CGTATTTCTTGGTGGGGGCTCATACCCCTGAGTCATGTACCGTGCGAGTG
CGAGTGGTCGCACACCCCCTACACCGAAATCCATTTCTCGACTACCCTAG
GAAGACGGTACGAAACCCGCCCAATATATGCAAGGAATACCCCGACAAGA
TCAATCCAACGCCACCTTTCGGCGTTGGCACCCCCTTGATTATGGAGCGG
TCGGGCCATGAATGTCGGTCTAGTCGTGTGCAAGCACTCTCACATTTATT
GTGCACCTGTTTGGTACACGTGGTGTGTTTGGGTGACTCCTTGCTGCACT
TAATGGTCAACTCGGATCTGGAATGGGCGAGAGCACGAAAAGCAATGCGA
GCAACATGAGCGTGGACTTTGATCGGTTCAGAGTTTGGTGTAGAGGGCAG
AATATTGTGCACCTTGTCTCGTGCAAAACCCTTGGTGATAAAATGAATGA
AGACAACCAGGATCGTTAGGTGTATATCTGTGCCGCCGCAAGCAGTAGCC
GTACCCTGTAGGTTCCATCCTTCGTCGGTTATACGAGAGGTCGGATGCGA
AGTGCAGCACTGGGGAGTACCATTGCAAAGGGGTACCCTGTTCTGTAAAC
CAACCGTGATGCGCACGAGCGTTCGAAAGGAATGAGGATATTTGAACCGC
AGCGAAGTGGAACTGTTTGCTGCGGGTTGAGGTTATCGTTCGCATGTTCT
AATCTAGGCCACTTCTCTGCTGGAGGAGCACGGGGACAATCTCCATGCCG
CCGGGAAATCGTCTAGGCTCGTCGACCGCGTTGCGGACTTACTCTCCGAT
GGAAACTTGAAGGCAAGTACAGTCGTTGTTGAAGACTTGTTCAGTAGACA
CCCGCTTGGTGCCATGTCACACCAAGTGATCTCTCTCGGTGTTCCAAGCG
CGCGACAGTCTCGAGTTCTAGGCAGTGGATAAATTGAATAACCACGCAGA
AAAACTTCATACATTCCCGTGGGCTACGGTGTGATTCAGGTGAACTTGCT
GGCCCTCGAGGGGGTGGTGCGGCTAGGAGCGAGCATGGGAAACAAGCTCG
AGCCGGTGGTCAACACGCTGGTTCCCGCGGTGTGCAAGAACCTGGCCTCT
TCGAACCAGCAGGTGCCTCGAAAGATGACGATCATCATTCGACACGACGA
CGACACTTGTTTTCCTGCGTCTTTTGTCAACCAGTTTCCCTAGGGCCCTC
AACCCTTCCGTGAATAGAATGTTTACTCCCCCCCCCCCGTCCGTTCCGTT
GCCATCCGACGATATTCCATGGCGCTTCGGCATGCCGCGAACTCATCGCC
CGGCGGTTGCGTTGTCCACCACGTCCACCATGTAATCGCGGTCTGTCTTG
CTGTCAGCGGGTTGCGCTGGCCGAGGAAGCGCTCGACGCGCTGTGCGAGG
CCGTCGACCCCTGCCTCTTCGTTCAGCCTGTGGCCTCTCTCGCACAGTAC
GGCAACGCCCGCTTGAAGGTAGAGACCATTGGTGCTGAGCAAGCGTCTGC
GCCGTGTGGTGCTGCGGGCACACCAGACCGCTGCTCTGACGTTTTCGGTC
ATGTTGCTGCACGTAAGCACGGGAGTAATGGTGGTGCTCGAAGATCGTAC
ATGCATGCAGATGAAGCGTTGAGCGCTACTCTCCAGCCCTGTTTTTAGTT
TTATCTTTGTCGGGCTGCACCCCCTGCTGGTAAATAGTGACAAGATGATA
GTGGCGAAGCCACCAGACATGGCGACGCTGGATCAACCAACGAAATAGCA
AAGTCATTTCTGCCTTCTTCGCGCCTGGTTACACCCACATCTTCGATGCA
TCCCACTTGGACATTTTTCGTCGCATTCTCGAAATCACTTGGTCTGCCTT
CAATTTTTTCCATAAGGCTTGGGAGTTAATCCACGTTAACCTCAATGTCT
GTATCTGTCATTACATTGATGGGGCGGCATTCTTCCTGGGAAGGTGCCCA
TGTTGGCCTTCCTGAGAGACATTACGCCAGAAGTCGGAGACGTCAAGCCG
ATCCTTCTCACAAAGTGAGTGTTGGGCACTCTCCCTTCTTGCCTTTGATA
TACGCTGTGCGAGGTAGTATACCATGTGCGAGATTCGAAACTCATTGACA
TAAGATTTCGCCCACCCTAGACCTCCCAAGTATCGAGGGCCATTCTTTGG
CGTGAGGGAAGTTTGTCGCCAGCGATAGTTGACCCTGCTTGCCGCCGAGT
TACCCTTGAGAGCATCCCCCCACCTCGATCACCAGCAACAGCGGCAGCCG
AAACGCAGGTAGGAGCGTATGCGAGACCTGCTCATGAGATAGCGCGCAAA
CCGCGTTCAAATTGTGCACACCATGCACGCATAACATTGTGGGCGTGCAC
CCGAACGGCACAGACACCACAGCCACGTGCTATTCGATTTAATCCCACAA
CCCGGAAACCAGAAAGCATCGAAAAACGTAAAGTGGAAAGGTTGGCTTGC
CTCTCGTAGGGAGTGCCCCAGGTGGATTGAGAGACACAAGGGAGATAGGG
CCAGGCAAAACCGATCTCTTTTTTCGTTAGAGATGAATCGTATTAAAAAA
TTGTTGTATATCTGCATGCCCAAGAAGCCAACGGCCCCACGCTGTGCAGG
AATTTGAACCTTTTCACGACCCTCCCCCTCCTACTGCAATACCCACCTCT
ACCCGACCCAAATGCAGGTATGTTCGGCCTACGGCTCTTTCGCTCGTAAG
AGAAAACCATCCCAATGTTCGAGACGCGGGGCTCTCGCTGCTTCGAGCGG
TAGAAGTTGCGCTCGACCCGTCTTCGATCTCGTATTCCCCTTCGAGAGTA
CGTCGAAGTAACAGCAGTGGACAGAATGGCGAACGCAGGGACAGGGGAAG
AGGTGGCGGTAGCGGTGGTGGTGGTGCCACTGGTAGTAGGGGGGGCGTAC
GGGGAAAAGATACGCGGAGACGGGAGGATGACTCCGTCGCCGGGCGTATT
CGAGACCTGCGGCAAGAGGAAGAGGCGTATCCGCAGTCGGTGTCATCGGC
TACCACCACGAGCAGCAGCGATGACTACCATCGACAACTAGGCAGGATTA
TCCCTAGGGAAGGGTTCGGTCGAACCAGATAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10:64689..69120-

>mRNA_E-siliculosus-1a_F_contig10.40.1 ID=mRNA_E-siliculosus-1a_F_contig10.40.1|Name=mRNA_E-siliculosus-1a_F_contig10.40.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3540bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10:64689..69120- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGCGAGGTGGACGAGGCTCGGCTCCGGAGAGAAATTCCTCCCCCGATACT
GGAACGCCTTCAGCGGGAGCTGCTGAACTCCTCCCTGCCGTCGGGCCCGG
GCTTCACCGCTCCAAACTCTGATGCCGCTTCCGCCACCCCCTATTCAGCG
GGGTCATCGTTCTCCTCCTCTTCCTACCTGAGTCGAAGCGGTCGCAACGA
CGTGGGCGCCAGAATCAGCCGCAGACTCGGCGCCACCGGACCCGTGCCTT
CATCGAGTGGCCCCGGGGTCTCTTCGCCTGTAAGCAGCTTTTCACCGATG
GCAGGGCGCCGCGGTGGAAGCGGTGGCGTCGGCGATGGCAACCGAGACCT
TAGAAGAAGGCGTACAGAGGGCGCTGGGAGCGGCGGCGGAGGCGGAGGTA
GGGGTGAGGAGAGGTGGATCGCCGCCGCGCCCGACGAAAGCTGGCGGCGA
GAGCAAGAAGCTACGCGAGGCGAGCTTGGTGACAGCGATGATGACGATGG
GTGCGGTAGTGACTTCGCGGGGGGGTTGGGGATGGGGTCGTTGTCCTCTC
CCCCGCATCGCGCGTCACCTTCGCTACGTCGATCGAGAAACTGGGCTGGG
GTGAGAATCGGCGAGGTGGACGAGGCTCGGCTCCGGAGAGAAATTCCTCC
CCCGATACTGGAACGCCTTCAGCGGGAGCTGCTGAACTCCTCCCTGCCGT
CGGGCCCGGGCTTCACCGCTCCAAACTCTGATGCCGCTTCCGCCACCCCC
TATTCAGCGGGGTCATCGTTCTCCTCCTCTTCCTACCTGAGTCGAAGCGG
TCGCAACGACGTGGGCGCCAGAATCAGCCGCAGACTCGGCGCCACCGGAC
CCGTGCCTTCATCGAGTGGCCCCGGGGTCTCTTCGCCTGTAAGCAGCTTT
TCACCGATGGCAGGGCGCCGCGGTGGAAGCGGTGGCGTCGGCGATGGCAA
CCGAGACCTTAGAAGAAGGCGTACAGAGGGCGCTGGGAGCGGCGGCGGAG
GCGGAGGTAGGGGTGAGGAGAGGTGGATCGCCGCCGCGCCCGACGAAAGC
TGGCGGCGAGAGCAAGAAGCTACGCGAGGCGAGCTTGGTGACAGCGATGA
TGACGATGGGTGCGGTAGTGACTTCGCGGGGGGGTTGGGGATGGGGTCGT
TGTCCTCTCCCCCGCATCGCGCGTCACCTTCGCTACGTCGATCGAGAAAC
TGGGCTGGGGTGAGAATCTATCCGGCAGAAGGTCACGCCGATACCGCCAG
GGAAGACCAGCAGCAACGACAGCAAGACGGTGCAGCACGATGTCACCCGC
GACTGCGACGGGGAGCGGCCGATCCAAACGACGAGACCACCACCGCCATC
TCGGCAAGGGCGGCTTCGATTTCTTCGCCGGGGAGGGGGGGTACCGGCGA
ACGCGGCGGCGGTCGCAGCAGCAGCGCAAAGAGGCGTTCGAGCAAAGCCA
AAGTGTTTCATTGTCGGGAAGCGGAACTGCTGCCAGAGGTGTACGCCCGC
TTGGACTCGGGAGACTGGAGGGAGCGTCTGAAAGGGCTGGAAGAGTATCC
GGCAGAAGGTCACGCCGATACCGCCAGGGAAGACCAGCAGCAACGACAGC
AAGACGGTGCAGCACGATGTCACCCGCGACTGCGACGGGGAGCGGCCGAT
CCAAACGACGAGACCACCACCGCCATCTCGGCAAGGGCGGCTTCGATTTC
TTCGCCGGGGAGGGGGGGTACCGGCGAACGCGGCGGCGGTCGCAGCAGCA
GCGCAAAGAGGCGTTCGAGCAAAGCCAAAGTGTTTCATTGTCGGGAAGCG
GAACTGCTGCCAGAGGTGTACGCCCGCTTGGACTCGGGAGACTGGAGGGA
GCGTCTGAAAGGGCTGGAAGAGGCCACTTCTCTGCTGGAGGAGCACGGGG
ACAATCTCCATGCCGCCGGGAAATCGTCTAGGCTCGTCGACCGCGTTGCG
GACTTACTCTCCGATGGAAACTTGAAGGCAAGTACAGCCACTTCTCTGCT
GGAGGAGCACGGGGACAATCTCCATGCCGCCGGGAAATCGTCTAGGCTCG
TCGACCGCGTTGCGGACTTACTCTCCGATGGAAACTTGAAGGCAAGTACA
GTGAACTTGCTGGCCCTCGAGGGGGTGGTGCGGCTAGGAGCGAGCATGGG
AAACAAGCTCGAGCCGGTGGTCAACACGCTGGTTCCCGCGGTGTGCAAGA
ACCTGGCCTCTTCGAACCAGCAGGTGAACTTGCTGGCCCTCGAGGGGGTG
GTGCGGCTAGGAGCGAGCATGGGAAACAAGCTCGAGCCGGTGGTCAACAC
GCTGGTTCCCGCGGTGTGCAAGAACCTGGCCTCTTCGAACCAGCAGCGGG
TTGCGCTGGCCGAGGAAGCGCTCGACGCGCTGTGCGAGGCCGTCGACCCC
TGCCTCTTCGTTCAGCCTGTGGCCTCTCTCGCACAGTACGGCAACGCCCG
CTTGAAGCGGGTTGCGCTGGCCGAGGAAGCGCTCGACGCGCTGTGCGAGG
CCGTCGACCCCTGCCTCTTCGTTCAGCCTGTGGCCTCTCTCGCACAGTAC
GGCAACGCCCGCTTGAAGGTGCCCATGTTGGCCTTCCTGAGAGACATTAC
GCCAGAAGTCGGAGACGTCAAGCCGATCCTTCTCACAAAGTGCCCATGTT
GGCCTTCCTGAGAGACATTACGCCAGAAGTCGGAGACGTCAAGCCGATCC
TTCTCACAAAGTATGTTCGGCCTACGGCTCTTTCGCTCGTAAGAGAAAAC
CATCCCAATGTTCGAGACGCGGGGCTCTCGCTGCTTCGAGCGGTAGAAGT
TGCGCTCGACCCGTCTTCGATCTCGTATTCCCCTTCGAGAGTACGTCGAA
GTAACAGCAGTGGACAGAATGGCGAACGCAGGGACAGGGGAAGAGGTGGC
GGTAGCGGTGGTGGTGGTGCCACTGGTAGTAGGGGGGGCGTACGGGGAAA
AGATACGCGGAGACGGGAGGATGACTCCGTCGCCGGGCGTATTCGAGACC
TGCGGCAAGAGGAAGAGGCGTATCCGCAGTCGGTGTCATCGGCTACCACC
ACGAGCAGCAGCGATGACTACCATCGACAACTAGGCAGGATTATCCCTAG
GGAAGGGTTCGGTCGAACCAGATAGGTATGTTCGGCCTACGGCTCTTTCG
CTCGTAAGAGAAAACCATCCCAATGTTCGAGACGCGGGGCTCTCGCTGCT
TCGAGCGGTAGAAGTTGCGCTCGACCCGTCTTCGATCTCGTATTCCCCTT
CGAGAGTACGTCGAAGTAACAGCAGTGGACAGAATGGCGAACGCAGGGAC
AGGGGAAGAGGTGGCGGTAGCGGTGGTGGTGGTGCCACTGGTAGTAGGGG
GGGCGTACGGGGAAAAGATACGCGGAGACGGGAGGATGACTCCGTCGCCG
GGCGTATTCGAGACCTGCGGCAAGAGGAAGAGGCGTATCCGCAGTCGGTG
TCATCGGCTACCACCACGAGCAGCAGCGATGACTACCATCGACAACTAGG
CAGGATTATCCCTAGGGAAGGGTTCGGTCGAACCAGATAG
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