mRNA_E-siliculosus-1a_F_contig1057.410.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1057.410.1

>prot_E-siliculosus-1a_F_contig1057.410.1 ID=prot_E-siliculosus-1a_F_contig1057.410.1|Name=mRNA_E-siliculosus-1a_F_contig1057.410.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=451bp
MNKATWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGER
ALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSALTSPGSMGTLLRLVFS
DGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLRDGCGASS
PKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISV
RCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPML
LVYSEGASFWPFSMASRGDHSLPPSEESLWANPWDWFRVAVPSLSRSDND
SPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGV
YFSSQQSPFSVWSSRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGY
RRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNIFKPLNEAAGPAVADRW
*
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mRNA from alignment at E-siliculosus-1a_F_contig1057:10587..16194+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1057.410.1 ID=mRNA_E-siliculosus-1a_F_contig1057.410.1|Name=mRNA_E-siliculosus-1a_F_contig1057.410.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5608bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1057:10587..16194+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CAGCAGGCAAGGCGGTGGCGCGCAAAGGGGCCAAGACACGCACAACACAA
GAGGTGAAAGAAACCAACTGAACTTTGCAGTCGCACCAATCCTCACAGAA
CCAATCATCTACGAGAGAGAGATGGAGAGACAACAGCGGAGAAAATACCG
AAATTCCGTACAGCAGTCCAATAGTCCAACGTCTGCAATTTCTTACGAGA
CAGAGCTCGAGCTCGGTTTGGGTGCGAGACGGTGTGCGTGCAGCACGATC
CACGACGTCTGTTCCATTGCCCTACAACGATCGTCTTCTTGGAAATGGCC
GTTCCAAGTACACACTGCTGTGCTGGTGTCACAACAGGTTTGTTTCCATT
TTGCCAGCGCTAAAAGGCGCACGAGTGCCCGTTACACCGCGCGCGAGGTA
ATGTACAAGTACTTTCCTCGGACACTCGCCGCGCCACTACAGCAGTAGAT
ACAAGACTGCTCCTTCCTTCGCTTCACCCGGCCGATGCTACTTGAAGAGG
CGCACTCACAACCACAAGCGTATGCCCGCACTCGTTTTGCAACGCAAGTA
CACCTACATATCTTTGGCCCCATCATACGTTGGACTTGCGGCCATGTTTT
CGTCGAACACCTCGTTTGGCCCAAGGAATTTTTACGGAGGATGATGTTTG
TGTTTTTTGCGTTTCCGGCTGGTGTGCAAAAGCGTCGCGGACGGCGTGAA
AAAAGTGTCACACCTTGAAGTCGTAGGAACCACTGGGAAGTTTCTCTCAA
ACCCTTCGCATTAGTCGTAGTCTGCCGTTGACGGCTGCTGTGGCTTTTTT
GTCATCGAGGGGAATTGCGAATCGACGGTCCAGTTAGCAACCGTAGTCGA
CAAAAATTCGTTGAGCCTCCCGATGTGCGTGTATGAGCTGCATTCCCGAT
GTCACATACTGTATATGCGTATGATACTTGATCCCTAGACCTGTAGTTGA
TTCGAATGATGTCAAATCGCCCGATTGCTTGCTGCTGCTGTGCGAGGTGT
GGATTGGCAATAAGGAACGAACCCGGCAAGACTCGCTGCCCGAAACGGGG
GGAAGAGGTTCACGAAGAGCAGATATATTCGTCTGGATTTTGCACGCCCA
CGCGGCGAACGCGTCCTTTGCTTGGATTTCCGGCCCCGAAACGAAATGTC
TGCGAATGGGCCATGTGCATACGCCAAGCGCGTCCACCCCAAGCCTTAAC
GAGAACACCGTCGCAACACCGCCGATCGGCATGCATTCAAAATTTTCAGG
TTCGCCATCGAAAAGGATTCCTTGACCGCCACATGTTCACGGACCTGTTG
GCTGCCTGCTGTGTGGTGTCACGCAATCTCTGTTGACCGGCGTATGCTAC
ACACAGAATATCGACGTCATTCCGGTACAGGCGTTTTGCCAGTTTCACCT
GAGCAGTCGAAACACCACAACAGGTGTGGGCCTGCAATCTCGACACAAGA
TTGACTTCGGTTTGTCCATGACCCAGACGGCGCACCGATATGAATGTATT
TACCCACCACATCCCAGAACACATCGGGTGGGACTGAGTGACAGCAGAAG
ACTTCAATATCCAGCGGATACGCTTGCCCGAGGTCGTATCATTTTTTTCC
ACATGTGCTTGCGTCCTGTACTAAACATGGAGGGGGGCATTGGACCCTGA
GCCACAAGTGCTTTGTGCTTCGAAGCACATGACGTCTTTGGCAGCCCCCG
GCCTTCGGAACGCCCTGACGACGACCCTCTGTGTTCCCTCCGATGCTTGC
ACGCTACGCACGTGTTGCACGCCGCGCGCTCTCTTGTATGCCCGTCCACA
GAGTCCTGTAGACTGGCTTCGGGGCTTGGCTGCCTCCACGCCGCGCCACC
ATGAATAAAGCGACCTGGGTGATAGCCATCGACATAGCCTGTGAGTTTGT
CCCCTTCACCGACATCCTCAGCGACGTCATCTTGTTGATAGCGGTCTGGC
CGAGGACAGCGGTGATCGCCCCTGACGATGTCGAAGGCTGCGGGGAAAGG
GCGCTCTGGTGAGAGAAACGGGGCAGGAGCATGGCCGTGAACACGAGCAG
CGAAATGGAATGCGGGAGTCTTGTGGAAACTACGAATGGTATTGTAGCCT
GTCCTTCCTCCCTTGGATGCCATTTTTCCTGTTGTCTTCACCAGGGGGGG
CGTTCCTAGAAAAACGAAACAGGAAAATAAGCCGTGGTTGGAGGACACGC
GACTTCGGGTTGATGTAGCAACCGAGTTGTCGGACTCGACTTTCGACACA
CCCACAAAGCAGCAGCAAGAAATTCAACCAACGGTATCTACCGGCTGGAA
GGATTTTTTTTTTGCCTGAAGCTTTGCTTCTGCTGACAATGTGCAGTAAC
GCGGTCCTTTCTGTCCCTCCGTTTCTTTTCGCGTTCCTGCATCATGTGCG
CATCGACACGCGACACAAACATCTCTAGTTGGCTGGCGTCCTCGCTTTTC
TGTGGCGGTTTTGTTTTTATTCATCTTAACCCGCGGCCGTTTTTGTTGTA
ACGCTCGAACAATCTACAGCCGTTTTCTTTGCTACTGCTCCCCCTGCTAT
TGCCTGAGTTTGGCGCTGGCCTTCCTTTTCGCGGAACACGTGCCTGGTGG
CCTGCCCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCGCCCCCCCCCCCCCCCCCCCGGCNNNNNNNNNNCCCTTTTTTT
TCCTCCCCCCCCCCCCCCTTTGTGCTCGGTTTGGGGCCGGCCCCCCCTCC
CCCGCAACCCCGCCCGGGGGGCCGCCCCCCCCCCCCCCCCCCCCCCCCCG
CCCCCTGCGTTGCGTGCAGGTACCTCGCCCTGTCCTTCACCGTGGTCGGC
ACGCTGGTCGACCTCTTCCCCGAGATGCTGCTCGTCTCGGAGATAGCGCT
TCACCCCTCGGCCCTCACGTCGCCGGGCTCGATGGGGACCCTTCTGCGGC
TCGTCTTCAGCGACGGAAAGCCGGTCGTCGTGTTCGCGGCTACCGAGGAG
TTCGAGAAGCCGCTGGCCCCGCCGCTGCTGGCCATTCGGGACTCGCTGCG
GCGGCGGCTGTCGTCGGTGGCGACCGCGTTTTTCCTTCGCGACGGCTGCG
GGGCGAGTTCGCCCAAGTGGACCTACGCCGGGTGGGAAGCTGGAGACATG
TCGAAAAATAATCAGCACACAAGAGAGCTAGGAAATGAATATAAACAGCT
TAAATCTTCGTTCTGAGTTTCCCAAGAGAATCTAACAATGAAACAATATT
CCAAATGTTGTTGATGAACGTCTTGGTTTTATTTCCCATCGCCGTTTGTG
ACCATGCCATCGTACCCGCTTCGCAGCTTTGACGGTCCCCTGCACGCCAT
GCCCGCACAAATCCGTCTGAGTTAATTAGTCGGCGCCGGTGTACCAGCTG
TACAATGATTGCCTGCGCATCGTCATGGGCAGCAGTAGTCCACCAGGCTG
TGTGCCTCGCCTCCCTCACAACCCCTCGCTGGCTCCACCCAACCCCGCCG
CCGCCGCCGCCGCCGCCGTCTCTCTGCCCCGCGCCAGGCTCGTCGGAGTC
CTGGTCGGGGGCGAGCTCCTGACGGCCATCGGCGCCTGCCTGTTCCTGCG
CATCGAGTTCGGGTGGCCGGCGCTGATCTCCCTCTTGGCGAGCCTGCTGG
CGCTGCTGATCTCGGTGCGCTGCCACATGCGGCGGGTCGGGGAGAAGACG
CTGCACCTGTGCCACGAGTCGGCGACGGGGAACGGAGGCAGGCTGTTCGA
GTTCCTGCTCCCCGGGCCGGTGACGCTGACCCGCTTCCTTCTCGCGGTGC
CCGTCTGGCCCATGCTCCTCGTCTACTCGGAGGGGGCGTCCTTCTGGCCG
TTCAGCATGGCGAGCAGGGGGGACCACTCCCTGCCGCCGTCGGAGGAGTC
GCTGTGGGCTAACCCTTGGGACTGGTTCAGGGTGAGCGCGAGACCCAAAA
AAATGGAAACGTGCTTACCTTTCTTTTTTACGATGCATCGCCGCGGGTGG
GCGGGTGCTGCTGCTGCTGCTGCTGCGGGGTATCGTGCCGGGGGTTGTTG
GCCTTCTTCTGGCCGTGGTTGTGCTCTGTCGCTCGCCGTTTCCCGACGGA
TCACTGCTGTCACACAAAGGTCCGATTTTTATTTTTGCGTGCGGACCATT
GCGGGTTTGGTTGTGCCGACCTTCTCGGTTACACCCTCAAATACTGAGGG
TAGAACAAGTCCTGTCTGTTGTCCCCCCCTGTGCAGGTCGCCGTGCCTTC
GCTCTCTCGGTCGGACAACGACAGCCCGCTGAGCTACGTGTACTGGGCGA
TCGTACCGCACCTGCTGTGGACCCTCGTTTCCGCGGTTTGGGTAGGCCTC
CTCGGCGCCGCCAATCTGGTCTGCTGGTACTTCGGGCACGCAGAGGTATG
ACGTGGCTTATCCTCATAGCACGGTGAAGCGTGGATCTAATAGTACGTCT
TTTTCTTGTACGATGCGGAGATGTAGTGTAGCGCTAGGTGTAGAAGAACT
GGAATCCGCACGCAGCCGGAGCCCTAGAGGTTTAACTCAGCGGCAGGTCG
AGTCTCAATCAGTCTGCTTGGCAAGGTGCTGTGATTCTTTCTCTTGGCGA
AGATACCCCCATGGATGCCCAGCTTAAGTCCCGACTGCGGCAGCTGCTTC
GAGATCGAACGCGCCAACACGCGCGCCAGGGGCACGCTTTGCTCCTCGAT
GCAAGCCCGTGTTTTCGCAAGCAAGCGTGTCGCTCTCGTTTGCGGCGGGG
GCGGGCGGGCGGGCCGCGGGTTATTGCTGTGCCTTCTATGCAAAAGGCTC
GGTTCATCGGGGGCACGAGAATATACGTAGTACTCACGGCGCCGTTGGCG
TGGCAAAGAAAGGTGGCGAAAGTTCGCCCGTGTTGAGGCGAGATGGCCGA
GTTCGTGCGATACAAGCAGTTAGGGCCCCCACATAACAACTTGGCGGGCA
AGAAATCGATACAGACTCGAAAAACTTTGAAAAATCTAAGGATGTGATCA
CCTTTTGTGAGCTCGGATAAGAACCCCTACACGGCCAATCGTAGCACAAC
CCTGAGAAGGAACTAATATAAGAACCCGCAGCCCCGGCTACAACCAGAGG
TTCTTTAGTGCAGGAGCGCTACCTGTAGGTGATTCCGGTTGCCCTTAGGG
ACCGGGGCCCCAATTGCCAGAGCACGTCCGTCCGCCCCTGCCCCCCCGAA
AAAATACCCGTGCAAACCAAACCGCAGGACTGGTCGGCGCACTCGTGGGG
CGTGTACTTCTCGAGCCAGCAGTCACCCTTCAGCGTCTGGTCGTCGCGGC
TGCAGTCGGCGCTGGGGATGGGCTTCACCGCGTGGGCCGCCAGGGAGTTC
CGGCGGCTGCTGGCCTTCTCGGCGGCGCTGGCGGCGGTGGTGGTCCAGGG
GTACCGGCGGGGCGCCTGCCTGGAGCAGGAGTGGGCGTTCGTGTTCGCCG
TGGCCGCGTGGTGGATCGCCGTGCTCATCGGCCACGCCGCCCGGAAGAAG
AACATCTTCAAGCCGCTCAACGAGGCCGCCGGCCCCGCCGTGGCGGACCG
CTGGTGACGGACGAGGAGGCGTGTTTTTGAGGGGCTGGCGCCGGGGGCGG
CTGCGGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1057:10587..16194+

>mRNA_E-siliculosus-1a_F_contig1057.410.1 ID=mRNA_E-siliculosus-1a_F_contig1057.410.1|Name=mRNA_E-siliculosus-1a_F_contig1057.410.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2706bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1057:10587..16194+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAATAAAGCGACCTGGGTGATAGCCATCGACATAGCCTGTGAGTTTGT
CCCCTTCACCGACATCCTCAGCGACGTCATCTTGTTGATAGCGGTCTGGC
CGAGGACAGCGGTGATCGCCCCTGACGATGTCGAAGGCTGCGGGGAAAGG
GCGCTCTGATGAATAAAGCGACCTGGGTGATAGCCATCGACATAGCCTGT
GAGTTTGTCCCCTTCACCGACATCCTCAGCGACGTCATCTTGTTGATAGC
GGTCTGGCCGAGGACAGCGGTGATCGCCCCTGACGATGTCGAAGGCTGCG
GGGAAAGGGCGCTCTGGTACCTCGCCCTGTCCTTCACCGTGGTCGGCACG
CTGGTCGACCTCTTCCCCGAGATGCTGCTCGTCTCGGAGATAGCGCTTCA
CCCCTCGGCCCTCACGTCGCCGGGCTCGATGGGGACCCTTCTGCGGCTCG
TCTTCAGCGACGGAAAGCCGGTCGTCGTGTTCGCGGCTACCGAGGAGTTC
GAGAAGCCGCTGGCCCCGCCGCTGCTGGCCATTCGGGACTCGCTGCGGCG
GCGGCTGTCGTCGGTGGCGACCGCGTTTTTCCTTCGCGACGGCTGCGGGG
CGAGTTCGCCCAAGTGGACCTACGCCGGGTACCTCGCCCTGTCCTTCACC
GTGGTCGGCACGCTGGTCGACCTCTTCCCCGAGATGCTGCTCGTCTCGGA
GATAGCGCTTCACCCCTCGGCCCTCACGTCGCCGGGCTCGATGGGGACCC
TTCTGCGGCTCGTCTTCAGCGACGGAAAGCCGGTCGTCGTGTTCGCGGCT
ACCGAGGAGTTCGAGAAGCCGCTGGCCCCGCCGCTGCTGGCCATTCGGGA
CTCGCTGCGGCGGCGGCTGTCGTCGGTGGCGACCGCGTTTTTCCTTCGCG
ACGGCTGCGGGGCGAGTTCGCCCAAGTGGACCTACGCCGGGCTCGTCGGA
GTCCTGGTCGGGGGCGAGCTCCTGACGGCCATCGGCGCCTGCCTGTTCCT
GCGCATCGAGTTCGGGTGGCCGGCGCTGATCTCCCTCTTGGCGAGCCTGC
TGGCGCTGCTGATCTCGGTGCGCTGCCACATGCGGCGGGTCGGGGAGAAG
ACGCTGCACCTGTGCCACGAGTCGGCGACGGGGAACGGAGGCAGGCTGTT
CGAGTTCCTGCTCCCCGGGCCGGTGACGCTGACCCGCTTCCTTCTCGCGG
TGCCCGTCTGGCCCATGCTCCTCGTCTACTCGGAGGGGGCGTCCTTCTGG
CCGTTCAGCATGGCGAGCAGGGGGGACCACTCCCTGCCGCCGTCGGAGGA
GTCGCTGTGGGCTAACCCTTGGGACTGGTTCAGGGCTCGTCGGAGTCCTG
GTCGGGGGCGAGCTCCTGACGGCCATCGGCGCCTGCCTGTTCCTGCGCAT
CGAGTTCGGGTGGCCGGCGCTGATCTCCCTCTTGGCGAGCCTGCTGGCGC
TGCTGATCTCGGTGCGCTGCCACATGCGGCGGGTCGGGGAGAAGACGCTG
CACCTGTGCCACGAGTCGGCGACGGGGAACGGAGGCAGGCTGTTCGAGTT
CCTGCTCCCCGGGCCGGTGACGCTGACCCGCTTCCTTCTCGCGGTGCCCG
TCTGGCCCATGCTCCTCGTCTACTCGGAGGGGGCGTCCTTCTGGCCGTTC
AGCATGGCGAGCAGGGGGGACCACTCCCTGCCGCCGTCGGAGGAGTCGCT
GTGGGCTAACCCTTGGGACTGGTTCAGGGTCGCCGTGCCTTCGCTCTCTC
GGTCGGACAACGACAGCCCGCTGAGCTACGTGTACTGGGCGATCGTACCG
CACCTGCTGTGGACCCTCGTTTCCGCGGTTTGGGTAGGCCTCCTCGGCGC
CGCCAATCTGGTCTGCTGGTACTTCGGGCACGCAGAGGTCGCCGTGCCTT
CGCTCTCTCGGTCGGACAACGACAGCCCGCTGAGCTACGTGTACTGGGCG
ATCGTACCGCACCTGCTGTGGACCCTCGTTTCCGCGGTTTGGGTAGGCCT
CCTCGGCGCCGCCAATCTGGTCTGCTGGTACTTCGGGCACGCAGAGGACT
GGTCGGCGCACTCGTGGGGCGTGTACTTCTCGAGCCAGCAGTCACCCTTC
AGCGTCTGGTCGTCGCGGCTGCAGTCGGCGCTGGGGATGGGCTTCACCGC
GTGGGCCGCCAGGGAGTTCCGGCGGCTGCTGGCCTTCTCGGCGGCGCTGG
CGGCGGTGGTGGTCCAGGGGTACCGGCGGGGCGCCTGCCTGGAGCAGGAG
TGGGCGTTCGTGTTCGCCGTGGCCGCGTGGTGGATCGCCGTGCTCATCGG
CCACGCCGCCCGGAAGAAGAACATCTTCAAGCCGCTCAACGAGGCCGCCG
GCCCCGCCGTGGCGGACCGCTGGTGAGACTGGTCGGCGCACTCGTGGGGC
GTGTACTTCTCGAGCCAGCAGTCACCCTTCAGCGTCTGGTCGTCGCGGCT
GCAGTCGGCGCTGGGGATGGGCTTCACCGCGTGGGCCGCCAGGGAGTTCC
GGCGGCTGCTGGCCTTCTCGGCGGCGCTGGCGGCGGTGGTGGTCCAGGGG
TACCGGCGGGGCGCCTGCCTGGAGCAGGAGTGGGCGTTCGTGTTCGCCGT
GGCCGCGTGGTGGATCGCCGTGCTCATCGGCCACGCCGCCCGGAAGAAGA
ACATCTTCAAGCCGCTCAACGAGGCCGCCGGCCCCGCCGTGGCGGACCGC
TGGTGA
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