prot_E-siliculosus-1a_F_contig10566.408.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10566.408.1
Unique Nameprot_E-siliculosus-1a_F_contig10566.408.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length43
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10566.408.1 vs. uniprot
Match: D8LJ33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ33_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.590e-9
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:   16 GWSESKTAVGEIFYVNHKEKKTTWVRPK 43
            GWSESKTA GEIFYVNHKEKKTTWVRPK
Sbjct:  269 GWSESKTAGGEIFYVNHKEKKTTWVRPK 296
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10566.408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ33_ECTSI1.590e-996.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 1..43
e-value: 4.3E-11
score: 44.6
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.504
IPR001202WW domainPFAMPF00397WWcoord: 15..42
e-value: 6.2E-9
score: 35.8
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 17..42
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 16..43
score: 12.846
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 12..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10566contigE-siliculosus-1a_F_contig10566:374..502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10566.408.1mRNA_E-siliculosus-1a_F_contig10566.408.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10566 374..502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10566.408.1 ID=prot_E-siliculosus-1a_F_contig10566.408.1|Name=mRNA_E-siliculosus-1a_F_contig10566.408.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=43bp
PLPPIHLLLCFLPSAGWSESKTAVGEIFYVNHKEKKTTWVRPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR001202WW_dom