prot_E-siliculosus-1a_F_contig10.39.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10.39.1
Unique Nameprot_E-siliculosus-1a_F_contig10.39.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1058
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10.39.1 vs. uniprot
Match: D7G0V5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V5_ECTSI)

HSP 1 Score: 1711 bits (4431), Expect = 0.000e+0
Identity = 904/1057 (85.53%), Postives = 930/1057 (87.98%), Query Frame = 0 
Query:    1 MFEDAEGYFSRLPGSFYGKCSGGNGQPAGWQKSDMPSLSAEDLILAVHKASSRRIEVLSRTTGNVDQMVEGYEWQLKILTARSPAGLSVSTAVHAASVGEERFKKGDCRGASRILRLALQAVGGYVGSGPAATASDPQAAHTGRLRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGGRWCAKGGGTDPPPKLLFAKCKVLTDAGDLTGAYTAAKTLVALTPAPSGTPTAGVGDREPEDGLDLAAARLISSREDCSDRSLDLFAAIASRFAGTPKAVDARVALLSGLAMAARLRSEGGGAGWLSPDGQHEKSSAAAATADKEAVDRAEKTADDMIAEISGCNSVATSQVDSALEVLVTFTEFFQGREKWESCARWCGRAINLAKGDSKGSTPKRAPHPDKAALLLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAARDPNRDESSLSARLSALSGPRARLTPGARREYLAACVGLVAGVRKATQDPDQRGGSDAGDARYDSRVTMVQERLLEALLLEAPATINVTKEVGPTQAQPSTSXXXXXXXXXXXXXXXXXXXXXXXXXCGGLAPTPMVVEGEGDEDEGDASVAGTGADATPSGNRSAGSNGNGTDAVPTAVQVVASIVDSALQWTSKQELQINRDSAEDAVSVLSRVLLSVDKTLRCAGSLGIGPLDDPDIQYLSHGCWNLAVRCCGSNCDLPWGDKVGSSASKDQMSVDKVTHTESKRTDLLVLAPAFFKASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSKPVDGAPLANVTMGSSERRDMLERSRKEVEVATGLNRLLSDVKPEMATEMRSILLVAEMSVLGRLGDSVAVRSLVASREPDFLRCSTNLLRYCLQLAEDMLDDAKSTAGLCRLCIRRCVEEDPVDTCALGGFYRRLLVSAPSREEALLVVDEFTAKSRDLQEGPGMPSDDVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPAFVRRWEEAIHKVYRTTLQAKGDAETATNPIMAGGSGLQASTAIGGRAFLSTGLFPMP 1057
            MFEDAEGYFSRLPGSFY           GWQK  MPSLSAEDLI+AVHKASSRRIEVLSRTTGNVDQMVEGYEWQLKILTARSPAGL +STAVHAASVGEERFKKGDCRGASRILRLALQA+GG VGSGP ATASDPQAAHTG+LRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGG WCAKGGGTDPPPK LFAKCKVLTDAGDLTGAYTAAK LVALTPAPSG PTAGVGD EPEDGLDLAAARLISSR+DCSDRSLDLFAAIASRFAGTPKAVDARVALLSGLAMAARLRSEGGGAGW SPDGQHEK SAAAATA+ EAV RAEKTADDMIAEISGCN+VAT QVDSALEVLVTFTEFFQGR+KWESCARWCGRAINLA GDSKGSTPKR PH DKA+LLLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAARDPNRDESSLSARLSALSGPRARLTPGARREYLA CVGLVAGVRKATQDPDQRG SDAG+ARYDSRVTMVQERLLEALL+EAPAT ++ KE  PTQAQPSTS                         CGG+APTPMVVEGEGDED GD  VA TGADATP GNRSAGSNGNGTD VPTAVQVVAS+VDSALQW SK+E++++R SAEDA SVLSRVLLSVDKTLR AGSLGIGPLDDPDI+YLSHGCWNLAVRCCGSNCDLPWGDKVGSSASKDQMSVD+ THTE KR DLLVLAPAFFKASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSKPVDGAPLAN T  SSERRDMLERSRKEVEVATGLNRLLSDVKP+MATEMRSILLVAEMSVLGRLGD VAVRSLVASREPDFLRCSTNLL+YCLQ                                                +EALLVVDEFTAKSRDLQEGPGMPS+DVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPAFVRRWEEAIHKVYRTTLQAKGDA TATNPIMAGGSG QASTAIGGRAFLSTGLFPMP
Sbjct:   86 MFEDAEGYFSRLPGSFYA---------TGWQKFGMPSLSAEDLIMAVHKASSRRIEVLSRTTGNVDQMVEGYEWQLKILTARSPAGLRMSTAVHAASVGEERFKKGDCRGASRILRLALQAIGGDVGSGPTATASDPQAAHTGKLRRTILFSLAHCCSKSGDHNNAIKFIKHLEEGGGWCAKGGGTDPPPKFLFAKCKVLTDAGDLTGAYTAAKALVALTPAPSGKPTAGVGDGEPEDGLDLAAARLISSRDDCSDRSLDLFAAIASRFAGTPKAVDARVALLSGLAMAARLRSEGGGAGWWSPDGQHEKGSAAAATAENEAVGRAEKTADDMIAEISGCNNVATYQVDSALEVLVTFTEFFQGRDKWESCARWCGRAINLATGDSKGSTPKRVPHADKASLLLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAARDPNRDESSLSARLSALSGPRARLTPGARREYLATCVGLVAGVRKATQDPDQRGESDAGNARYDSRVTMVQERLLEALLVEAPATTDMEKEAEPTQAQPSTSSTPHEAGSDKDGPAGSAPVGGAGEDCGGIAPTPMVVEGEGDEDVGDVPVARTGADATPPGNRSAGSNGNGTDPVPTAVQVVASMVDSALQWVSKEEIKVHRGSAEDAASVLSRVLLSVDKTLRRAGSLGIGPLDDPDIRYLSHGCWNLAVRCCGSNCDLPWGDKVGSSASKDQMSVDEATHTERKRNDLLVLAPAFFKASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSKPVDGAPLANATTSSSERRDMLERSRKEVEVATGLNRLLSDVKPDMATEMRSILLVAEMSVLGRLGDFVAVRSLVASREPDFLRCSTNLLQYCLQ------------------------------------------------DEALLVVDEFTAKSRDLQEGPGMPSEDVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPAFVRRWEEAIHKVYRTTLQAKGDAATATNPIMAGGSGSQASTAIGGRAFLSTGLFPMP 1085
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0V5_ECTSI0.000e+085.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 98..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10contigE-siliculosus-1a_F_contig10:53139..63632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10.39.1mRNA_E-siliculosus-1a_F_contig10.39.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10 53130..63632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10.39.1 ID=prot_E-siliculosus-1a_F_contig10.39.1|Name=mRNA_E-siliculosus-1a_F_contig10.39.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1058bp
MFEDAEGYFSRLPGSFYGKCSGGNGQPAGWQKSDMPSLSAEDLILAVHKA
SSRRIEVLSRTTGNVDQMVEGYEWQLKILTARSPAGLSVSTAVHAASVGE
ERFKKGDCRGASRILRLALQAVGGYVGSGPAATASDPQAAHTGRLRRTIL
FSLAHCCSKSGDHNNAIKFIKHLEEGGRWCAKGGGTDPPPKLLFAKCKVL
TDAGDLTGAYTAAKTLVALTPAPSGTPTAGVGDREPEDGLDLAAARLISS
REDCSDRSLDLFAAIASRFAGTPKAVDARVALLSGLAMAARLRSEGGGAG
WLSPDGQHEKSSAAAATADKEAVDRAEKTADDMIAEISGCNSVATSQVDS
ALEVLVTFTEFFQGREKWESCARWCGRAINLAKGDSKGSTPKRAPHPDKA
ALLLASLLTLRGEMECRTGDFASSSQTLDQALALCPTYGRAREVAFWSAA
RDPNRDESSLSARLSALSGPRARLTPGARREYLAACVGLVAGVRKATQDP
DQRGGSDAGDARYDSRVTMVQERLLEALLLEAPATINVTKEVGPTQAQPS
TSSTPHEAGSDRDGPAGSATVGAAGEDCGGLAPTPMVVEGEGDEDEGDAS
VAGTGADATPSGNRSAGSNGNGTDAVPTAVQVVASIVDSALQWTSKQELQ
INRDSAEDAVSVLSRVLLSVDKTLRCAGSLGIGPLDDPDIQYLSHGCWNL
AVRCCGSNCDLPWGDKVGSSASKDQMSVDKVTHTESKRTDLLVLAPAFFK
ASRNWAEIGSDANMEDALLRRQNCVVLSIAATLELYDSKPVDGAPLANVT
MGSSERRDMLERSRKEVEVATGLNRLLSDVKPEMATEMRSILLVAEMSVL
GRLGDSVAVRSLVASREPDFLRCSTNLLRYCLQLAEDMLDDAKSTAGLCR
LCIRRCVEEDPVDTCALGGFYRRLLVSAPSREEALLVVDEFTAKSRDLQE
GPGMPSDDVDYVSAKCYNLGLQLLEMSRPGEAERFVGKALGLLKLGSSPA
FVRRWEEAIHKVYRTTLQAKGDAETATNPIMAGGSGLQASTAIGGRAFLS
TGLFPMP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf